PDB: 1292 resultsInfo pagesStatus searchChemie searchBIRD

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6ZVH	EDF1-ribosome complex Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Best, K.M, Denk, T, Cheng, J, Thoms, M, Berninghausen, O, Beckmann, R. Deposit date: 2020-07-24 Release date: 2020-08-19 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: EDF1 coordinates cellular responses to ribosome collisions. Elife, 9, 2020
6G53	Cryo-EM structure of a late human pre-40S ribosomal subunit - State E Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2018-03-28 Release date: 2018-06-06 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6G5I	Cryo-EM structure of a late human pre-40S ribosomal subunit - State R Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2018-03-29 Release date: 2018-06-06 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6G51	Cryo-EM structure of a late human pre-40S ribosomal subunit - State D Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2018-03-28 Release date: 2018-06-06 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
4ETS	Crystal structure of Campylobacter jejuni ferric uptake regulator Descriptor: CHLORIDE ION, Ferric uptake regulation protein, ZINC ION Authors: Sarvan, S, Brunzelle, J.B, Couture, J.-F. Deposit date: 2012-04-24 Release date: 2012-06-20 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure and regulon of Campylobacter jejuni ferric uptake regulator Fur define apo-Fur regulation. Proc.Natl.Acad.Sci.USA, 109, 2012
8G61	mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state) Descriptor: 1,4-DIAMINOBUTANE, 18S rRNA, 28S rRNA, ... Authors: Holm, M, Natchiar, K.S, Rundlet, E.J, Myasnikov, A.G, Altman, R.B, Blanchard, S.C. Deposit date: 2023-02-14 Release date: 2023-04-19 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (2.94 Å) Cite: mRNA decoding in human is kinetically and structurally distinct from bacteria. Nature, 617, 2023
8G5Z	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state) Descriptor: 1,4-DIAMINOBUTANE, 18S rRNA, 28S rRNA, ... Authors: Holm, M, Natchiar, K.S, Rundlet, E.J, Myasnikov, A.G, Altman, R.B, Blanchard, S.C. Deposit date: 2023-02-14 Release date: 2023-04-19 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (2.64 Å) Cite: mRNA decoding in human is kinetically and structurally distinct from bacteria. Nature, 617, 2023
8G6J	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2) Descriptor: (3R,6R,9S,12S,15S,18S,20R,24aR)-6-[(2S)-butan-2-yl]-3,12-bis[(1R)-1-hydroxy-2-methylpropyl]-8,9,11,17,18-pentamethyl-15-[(2S)-2-methylbutyl]hexadecahydropyrido[1,2-a][1,4,7,10,13,16,19]heptaazacyclohenicosine-1,4,7,10,13,16,19(21H)-heptone, (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 1,4-DIAMINOBUTANE, ... Authors: Holm, M, Natchiar, K.S, Rundlet, E.J, Myasnikov, A.G, Altman, R.B, Blanchard, S.C. Deposit date: 2023-02-15 Release date: 2023-04-19 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: mRNA decoding in human is kinetically and structurally distinct from bacteria. Nature, 617, 2023
8G5Y	mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state) Descriptor: 1,4-DIAMINOBUTANE, 18S rRNA, 28S rRNA, ... Authors: Holm, M, Natchiar, K.S, Rundlet, E.J, Myasnikov, A.G, Altman, R.B, Blanchard, S.C. Deposit date: 2023-02-14 Release date: 2023-04-19 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (2.29 Å) Cite: mRNA decoding in human is kinetically and structurally distinct from bacteria. Nature, 617, 2023
8GLP	mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure) Descriptor: 1,4-DIAMINOBUTANE, 18S rRNA, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ... Authors: Holm, M, Natchiar, K.S, Rundlet, E.J, Myasnikov, A.G, Watson, Z.L, Altman, R.B, Blanchard, S.C. Deposit date: 2023-03-22 Release date: 2023-04-19 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (1.67 Å) Cite: mRNA decoding in human is kinetically and structurally distinct from bacteria. Nature, 617, 2023
5OA3	Human 40S-eIF2D-re-initiation complex Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Weisser, M, Schaefer, T, Leibundgut, M, Boehringer, D, Aylett, C.H.S, Ban, N. Deposit date: 2017-06-20 Release date: 2017-08-09 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (4.2 Å) Cite: Structural and Functional Insights into Human Re-initiation Complexes. Mol. Cell, 67, 2017
7OUG	STLV-1 intasome:B56 in complex with the strand-transfer inhibitor raltegravir Descriptor: DNA (5'-D(*AP*CP*TP*GP*TP*GP*TP*TP*TP*GP*GP*CP*GP*CP*TP*TP*CP*TP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*AP*GP*AP*AP*GP*CP*GP*CP*CP*AP*AP*AP*CP*AP*CP*A)-3'), Integrase, ... Authors: Barski, M.S, Ballandras-Colas, A, Cronin, N.B, Pye, V.E, Cherepanov, P, Maertens, G.N. Deposit date: 2021-06-11 Release date: 2021-08-18 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural basis for the inhibition of HTLV-1 integration inferred from cryo-EM deltaretroviral intasome structures. Nat Commun, 12, 2021
7OUH	Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor bictegravir Descriptor: Bictegravir, DNA (5'-D(*AP*CP*TP*GP*TP*GP*TP*TP*TP*GP*GP*CP*GP*CP*TP*TP*CP*TP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*AP*GP*AP*AP*GP*CP*GP*CP*CP*AP*AP*AP*CP*AP*CP*A)-3'), ... Authors: Barski, M.S, Ballandras-Colas, A, Cronin, N.B, Pye, V.E, Cherepanov, P, Maertens, G.N. Deposit date: 2021-06-11 Release date: 2021-08-18 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural basis for the inhibition of HTLV-1 integration inferred from cryo-EM deltaretroviral intasome structures. Nat Commun, 12, 2021
6OVM	Crystal Structure of the Pseudomonas capeferrum Anti-sigma Regulator PupR C-terminal Cell-surface Signaling Domain in Complex with the Outer Membrane Transporter PupB N-terminal Signaling Domain (SeMet) Descriptor: Ferric-pseudobactin BN7/BN8 receptor, L(+)-TARTARIC ACID, Siderophore-interacting protein Authors: Jensen, J.L, Colbert, C.L. Deposit date: 2019-05-08 Release date: 2020-03-04 Last modified: 2020-05-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis of cell-surface signaling by a conserved sigma regulator in Gram-negative bacteria. J.Biol.Chem., 295, 2020
6OVK	Crystal Structure of the Pseudomonas capeferrum Anti-sigma Regulator PupR C-terminal Cell-surface Signaling Domain in Complex with the Outer Membrane Transporter PupB N-terminal Signaling Domain Descriptor: Ferric-pseudobactin BN7/BN8 receptor, L(+)-TARTARIC ACID, Siderophore-interacting protein Authors: Jensen, J.L, Colbert, C.L. Deposit date: 2019-05-08 Release date: 2020-03-04 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.761 Å) Cite: Structural basis of cell-surface signaling by a conserved sigma regulator in Gram-negative bacteria. J.Biol.Chem., 295, 2020
7R4X	Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Pellegrino, S, Dent, K.C, Spikes, T, Warren, A.J. Deposit date: 2022-02-09 Release date: 2023-02-22 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.15 Å) Cite: Cryo-EM reconstruction of the human 40S ribosomal subunit at 2.15 angstrom resolution. Nucleic Acids Res., 51, 2023
7K5I	SARS-COV-2 nsp1 in complex with human 40S ribosome Descriptor: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ... Authors: Wang, L, Shi, M, Wu, H. Deposit date: 2020-09-16 Release date: 2020-10-14 Last modified: 2021-03-17 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: SARS-CoV-2 Nsp1 suppresses host but not viral translation through a bipartite mechanism. Biorxiv, 2020
6Y2L	Structure of human ribosome in POST state Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ... Authors: Bhaskar, V, Schenk, A.D, Cavadini, S, von Loeffelholz, O, Natchiar, S.K, Klaholz, B.P, Chao, J.A. Deposit date: 2020-02-16 Release date: 2020-04-15 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (3 Å) Cite: Dynamics of uS19 C-Terminal Tail during the Translation Elongation Cycle in Human Ribosomes. Cell Rep, 31, 2020
8BQW	Cryo-EM structure of alpha-synuclein filaments doublet from Juvenile-onset synucleinopathy Descriptor: Alpha-synuclein, Unknown protein Authors: Yang, Y, Garringer, J.H, Shi, Y, Lovestam, S, Peak-Chew, S.Y, Zhang, X.J, Kotecha, A, Bacioglu, M, Koto, A, Takao, M, Spillantini, G.M, Ghetti, B, Vidal, R, Murzin, G.A, Scheres, H.W.S, Goedert, M. Deposit date: 2023-01-18 Release date: 2023-02-22 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (2.3 Å) Cite: New SNCA mutation and structures of alpha-synuclein filaments from juvenile-onset synucleinopathy. Acta Neuropathol, 145, 2023
8JDM	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state) Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. Deposit date: 2023-05-14 Release date: 2023-12-06 Last modified: 2023-12-27 Method: ELECTRON MICROSCOPY (2.67 Å) Cite: Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023
8JDL	Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state) Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. Deposit date: 2023-05-14 Release date: 2023-12-06 Last modified: 2023-12-27 Method: ELECTRON MICROSCOPY (2.42 Å) Cite: Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023
8JDJ	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU) Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. Deposit date: 2023-05-14 Release date: 2023-12-06 Last modified: 2023-12-27 Method: ELECTRON MICROSCOPY (2.5 Å) Cite: Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023
8JDK	Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU) Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. Deposit date: 2023-05-14 Release date: 2023-12-06 Last modified: 2023-12-27 Method: ELECTRON MICROSCOPY (2.26 Å) Cite: Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023
8BQV	Cryo-EM structure of alpha-synuclein singlet filament from Juvenile-onset synucleinopathy Descriptor: Alpha-synuclein, Unknown protein Authors: Yang, Y, Garringer, J.H, Shi, Y, Lovestam, S, Peak-Chew, S.Y, Zhang, X.J, Kotecha, A, Bacioglu, M, Koto, A, Takao, M, Spillantini, G.M, Ghetti, B, Vidal, R, Murzin, G.A, Scheres, H.W.S, Goedert, M. Deposit date: 2023-01-18 Release date: 2023-02-22 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (2 Å) Cite: New SNCA mutation and structures of alpha-synuclein filaments from juvenile-onset synucleinopathy. Acta Neuropathol, 145, 2023
8K2C	Cryo-EM structure of the human 80S ribosome with Tigecycline Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... Authors: Li, X, Wang, M, Cheng, J. Deposit date: 2023-07-12 Release date: 2024-07-10 Method: ELECTRON MICROSCOPY (2.4 Å) Cite: Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline. Nat Commun, 15, 2024

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