PDB: 931 resultsInfo pagesStatus searchChemie searchBIRD

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6OGA	Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-Br1Y), H148D; circular permutant (50-51) Descriptor: ACETATE ION, Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-Br1Y), ... Authors: Lin, C.-Y, Boxer, S.G. Deposit date: 2019-04-02 Release date: 2020-04-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems. J.Phys.Chem.B, 124, 2020
6OGB	Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-I1Y), H148D; circular permutant (50-51) Descriptor: ACETATE ION, Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-I1Y), ... Authors: Lin, C.-Y, Boxer, S.G. Deposit date: 2019-04-02 Release date: 2020-04-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems. J.Phys.Chem.B, 124, 2020
2G6Y	Crystal structure of the novel green fluorescent protein from marine copepod Pontellina plumata Descriptor: green fluorescent protein 2 Authors: Evdokimov, A.G, Pokross, M.E, Chudakov, D.M. Deposit date: 2006-02-26 Release date: 2006-03-28 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis for the fast maturation of Arthropoda green fluorescent protein. Embo Rep., 7, 2006
2HJO	Crystal structure of V224H design intermediate for GFP metal ion reporter Descriptor: 1,2-ETHANEDIOL, Green Fluorescent Protein, MAGNESIUM ION Authors: Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-06-30 Release date: 2008-04-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter To be Published
2HQZ	Crystal structure of L42H design intermediate for GFP metal ion reporter Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-07-19 Release date: 2008-04-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter To be Published
2HQK	Crystal structure of a monomeric cyan fluorescent protein derived from Clavularia Descriptor: ACETATE ION, CHLORIDE ION, Cyan fluorescent chromoprotein, ... Authors: Henderson, J.N, Campbell, R.E, Ai, H, Remington, S.J. Deposit date: 2006-07-18 Release date: 2007-01-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.19 Å) Cite: Directed evolution of a monomeric, bright and photostable version of Clavularia cyan fluorescent protein: structural characterization and applications in fluorescence imaging. Biochem.J., 400, 2006
2ICR	Red fluorescent protein zRFP574 from Zoanthus sp. Descriptor: Red fluorescent protein zoanRFP, SULFATE ION Authors: Pletnev, S, Pletneva, N, Tikhonova, T, Pletnev, V. Deposit date: 2006-09-13 Release date: 2007-10-02 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus. Acta Crystallogr.,Sect.D, 63, 2007
2IB6	Structural characterization of a blue chromoprotein and its yellow mutant from the sea anemone cnidopus japonicus Descriptor: PHOSPHATE ION, Yellow mutant chromo protein Authors: Chan, M.C.Y, Bosanac, I, Ho, D, Prive, G, Ikura, M. Deposit date: 2006-09-10 Release date: 2006-10-10 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural Characterization of a Blue Chromoprotein and Its Yellow Mutant from the Sea Anemone Cnidopus Japonicus J.Biol.Chem., 281, 2006
2IOV	Bright-state structure of the reversibly switchable fluorescent protein Dronpa Descriptor: Fluorescent protein Dronpa Authors: Stiel, A.C, Trowitzsch, S, Weber, G, Andresen, M, Eggeling, C, Hell, S.W, Jakobs, S, Wahl, M.C. Deposit date: 2006-10-11 Release date: 2006-12-05 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: 1.8 A bright-state structure of the reversibly switchable fluorescent protein Dronpa guides the generation of fast switching variants Biochem.J., 402, 2007
2H9W	Green fluorescent protein ground states: the influence of a second protonation site near the chromophore Descriptor: Green fluorescent protein, SULFATE ION Authors: Garau, G. Deposit date: 2006-06-12 Release date: 2007-04-24 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Green Fluorescent Protein Ground States: The Influence of a Second Protonation Site near the Chromophore. Biochemistry, 46, 2007
2HGD	Structure of S65A Y66F GFP variant with an oxidized chromophore Descriptor: Green fluorescent protein Authors: Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-06-26 Release date: 2007-03-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.6 Å) Cite: The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis J.Am.Chem.Soc., 129, 2007
2HGY	Structure of S65A Y66F E222A GFP variant after cyclization and carbon-carbon bond cleavage Descriptor: Green fluorescent protein Authors: Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-06-27 Release date: 2007-03-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.05 Å) Cite: The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis J.Am.Chem.Soc., 129, 2007
2IE2	The 1.7 A crystal structure of Dronpa: a photoswitchable green fluorescent protein Descriptor: Fluorescent protein Dronpa Authors: Rossjohn, J, Wilmann, P.G. Deposit date: 2006-09-16 Release date: 2006-11-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.7 Å) Cite: The 1.7 A Crystal Structure of Dronpa: A Photoswitchable Green Fluorescent Protein J.Mol.Biol., 364, 2006
2IB5	Structural characterization of a blue chromoprotein and its yellow mutant from the sea anemone cnidopus japonicus Descriptor: Chromo protein, PHOSPHATE ION Authors: Chan, M.C.Y, Bosanac, I, Ikura, M. Deposit date: 2006-09-10 Release date: 2006-10-10 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural Characterization of a Blue Chromoprotein and Its Yellow Mutant from the Sea Anemone Cnidopus Japonicus J.Biol.Chem., 281, 2006
2G2S	Structure of S65G Y66S GFP variant after spontaneous peptide hydrolysis Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P. Deposit date: 2006-02-16 Release date: 2006-04-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation. J.Am.Chem.Soc., 128, 2006
2G6X	Crystal structure of a novel green fluorescent protein from marine copepod Pontellina plumata Descriptor: green fluorescent protein 2 Authors: Evdokimov, A.G, Pokross, M.E, Chudakov, D.M. Deposit date: 2006-02-26 Release date: 2006-03-28 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural basis for the fast maturation of Arthropoda green fluorescent protein. Embo Rep., 7, 2006
2G6E	Structure of cyclized F64L S65A Y66S GFP variant Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P. Deposit date: 2006-02-24 Release date: 2006-04-18 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation. J.Am.Chem.Soc., 128, 2006
2G5Z	Structure of S65G Y66S GFP variant after spontaneous peptide hydrolysis and decarboxylation Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-02-23 Release date: 2006-04-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation. J.Am.Chem.Soc., 128, 2006
2HPW	Green fluorescent protein from Clytia gregaria Descriptor: Green fluorescent protein Authors: Stepanyuk, G, Liu, Z.J, Vysotski, S.E, Lee, J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG) Deposit date: 2006-07-17 Release date: 2006-09-12 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Crystal Structure of Green Fluorescent Protein from Clytia Gregaria at 1.55 A resolution To be Published
2HRS	Crystal structure of L42H V224H design intermediate for GFP metal ion reporter Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-07-20 Release date: 2008-04-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter To be Published
2H5Q	Crystal structure of mCherry Descriptor: mCherry Authors: Shu, X, Remington, S.J. Deposit date: 2006-05-26 Release date: 2006-08-22 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (1.36 Å) Cite: Novel Chromophores and Buried Charges Control Color in mFruits Biochemistry, 45, 2006
2GX2	Crystal structural and functional analysis of GFP-like fluorescent protein Dronpa Descriptor: MAGNESIUM ION, fluorescent protein Dronpa Authors: Hwang, K.Y, Nam, K.-H, Park, S.-Y, Sugiyama, K. Deposit date: 2006-05-08 Release date: 2007-05-08 Last modified: 2024-10-09 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural characterization of the photoswitchable fluorescent protein Dronpa-C62S Biochem.Biophys.Res.Commun., 354, 2007
2HFC	Structure of S65T Y66F R96A GFP variant in precursor state Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-06-23 Release date: 2007-03-27 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.2 Å) Cite: The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis J.Am.Chem.Soc., 129, 2007
2H6V	Spectroscopic and structural study of the heterotropic linkage between halide and proton ion binding to GFP proteins- E2(GFP) APO FORM Descriptor: Green fluorescent protein, SODIUM ION Authors: Garau, G. Deposit date: 2006-06-01 Release date: 2007-05-15 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (1.47 Å) Cite: Spectroscopic and Structural Study of Proton and Halide Ion Cooperative Binding to GFP Biophys.J., 93, 2007
2H5R	Crystal structure of mStrawberry at pH 10.5 Descriptor: mStrawberry Authors: Shu, X, Remington, S.J. Deposit date: 2006-05-26 Release date: 2006-08-22 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Novel Chromophores and Buried Charges Control Color in mFruits Biochemistry, 45, 2006

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