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4EZE
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BU of 4eze by Molmil
Crystal structure of had family hydrolase t0658 from Salmonella enterica subsp. enterica serovar Typhi (Target EFI-501419)
Descriptor: CHLORIDE ION, Haloacid dehalogenase-like hydrolase, SODIUM ION
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Allen, K.N, Dunaway-Mariano, D, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-05-02
Release date:2012-07-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystal structure of had hydrolase t0658 from Salmonella enterica (Target EFI-501419)
To be Published
4F7A
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BU of 4f7a by Molmil
Crystal structure of a susd homolog (BVU_2203) from Bacteroides vulgatus ATCC 8482 at 1.85 A resolution
Descriptor: ACETATE ION, GLYCEROL, Putative uncharacterized protein, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2012-05-15
Release date:2012-05-30
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a susd homolog (BVU_2203) from Bacteroides vulgatus ATCC 8482 at 1.85 A resolution
To be published
3H7K
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BU of 3h7k by Molmil
Crystal Structure of Arabidopsis thaliana Agmatine Deiminase Complexed with a Covalently Bound Reaction Intermediate
Descriptor: Agmatine deiminase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Burgie, E.S, Bingman, C.A, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-04-27
Release date:2009-05-26
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural Insights into the Catalytic Mechanism of Arabidopsis thaliana Agmatine Deiminase
to be published
2NNK
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BU of 2nnk by Molmil
Crystal structure analysis of HIV-1 protease mutant I84V with a inhibitor saquinavir
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, ACETIC ACID, CHLORIDE ION, ...
Authors:Tie, Y, Kovalevsky, A.Y, Boross, P, Wang, Y.F, Ghosh, A.K, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2006-10-24
Release date:2007-03-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Atomic resolution crystal structures of HIV-1 protease and mutants V82A and I84V with saquinavir.
Proteins, 67, 2007
3H0N
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BU of 3h0n by Molmil
Crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 A resolution
Descriptor: ACETATE ION, GLYCEROL, NICKEL (II) ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-04-09
Release date:2009-04-21
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The structure of Jann_2411 (DUF1470) from Jannaschia sp. at 1.45  resolution reveals a new fold (the ABATE domain) and suggests its possible role as a transcription regulator.
Acta Crystallogr.,Sect.F, 66, 2010
3H12
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BU of 3h12 by Molmil
Crystal structure of putative mandelate racemase from Bordetella Bronchiseptica RB50
Descriptor: SODIUM ION, mandelate racemase
Authors:Malashkevich, V.N, Toro, R, Morano, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-04-10
Release date:2009-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of putative mandelate racemase from Bordetella Bronchiseptica RB50
To be Published
1TV9
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BU of 1tv9 by Molmil
HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A MISMATCHED TEMPLATE ADENINE AND INCOMING CYTIDINE
Descriptor: 5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
Authors:Krahn, J.M, Beard, W.M, Wilson, S.H.
Deposit date:2004-06-29
Release date:2004-11-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:STRUCTURAL INSIGHTS INTO DNA POLYMERASE BETA DETERRENTS FOR MISINCORPORATION SUPPORT OF AN INDUCED-FIT MECHANISM FOR FIDELITY
Structure, 12, 2004
4FDZ
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BU of 4fdz by Molmil
EutL from Clostridium perfringens, Crystallized Under Reducing Conditions
Descriptor: Ethanolamine utilization protein, SODIUM ION
Authors:Thompson, M.C, Cascio, D, Crowley, C.S, Kopstein, J.S, Yeates, T.O.
Deposit date:2012-05-29
Release date:2013-05-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein.
Protein Sci., 24, 2015
4F5Q
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BU of 4f5q by Molmil
Closed ternary complex of R283K DNA polymerase beta
Descriptor: 2'-deoxy-5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]cytidine, DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(P*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ...
Authors:Freudenthal, B.D, Beard, W.A, Wilson, S.H.
Deposit date:2012-05-13
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures of dNTP Intermediate States during DNA Polymerase Active Site Assembly.
Structure, 20, 2012
4FAV
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BU of 4fav by Molmil
Crystal Structure of WT MauG in Complex with Pre-Methylamine Dehydrogenase Aged 50 Days
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Yukl, E.T, Wilmot, C.M.
Deposit date:2012-05-22
Release date:2013-03-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Diradical intermediate within the context of tryptophan tryptophylquinone biosynthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
3GRD
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BU of 3grd by Molmil
Crystal structure of NTF2-superfamily protein with unknown function (NP_977240.1) from BACILLUS CEREUS ATCC 10987 at 1.25 A resolution
Descriptor: ACETATE ION, SODIUM ION, uncharacterized NTF2-superfamily protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-03-25
Release date:2009-04-07
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of NTF2-superfamily protein with unknown function (NP_977240.1) from BACILLUS CEREUS ATCC 10987 at 1.25 A resolution
To be published
3GSH
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BU of 3gsh by Molmil
Three-dimensional structure of a post translational modified barley LTP1
Descriptor: (12E)-10-oxooctadec-12-enoic acid, Non-specific lipid-transfer protein 1, SODIUM ION, ...
Authors:Lascombe, M.B, Prange, T, Bakan, B, Marion, D.
Deposit date:2009-03-27
Release date:2009-12-15
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of oxylipin-conjugated barley LTP1 highlights the unique plasticity of the hydrophobic cavity of these plant lipid-binding proteins.
Biochem.Biophys.Res.Commun., 390, 2009
3GNK
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BU of 3gnk by Molmil
Calcium bound to the Holliday junction sequence d(TCGGCGCCGA)4
Descriptor: 5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3', CALCIUM ION, SODIUM ION
Authors:Naseer, A, Cardin, C.J.
Deposit date:2009-03-17
Release date:2009-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Calcium bound to the Holliday junction sequence d(TCGGCGCCGA)4
To be Published
2QFP
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BU of 2qfp by Molmil
Crystal structure of red kidney bean purple acid phosphatase in complex with fluoride
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FE (III) ION, FLUORIDE ION, ...
Authors:Guddat, L.W, Schenk, G.S, Gahan, L.R, Elliot, T.W, Leung, E.
Deposit date:2007-06-27
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of a purple acid phosphatase, representing different steps of this enzyme's catalytic cycle.
Bmc Struct.Biol., 8, 2008
2NQL
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BU of 2nql by Molmil
Crystal structure of a member of the enolase superfamily from Agrobacterium tumefaciens
Descriptor: GLYCEROL, Isomerase/lactonizing enzyme, SODIUM ION, ...
Authors:Patskovsky, Y, Ramagopal, U, Toro, R, Sauder, J.M, Dickey, M, Adams, J.M, Ozyurt, S, Wasserman, S.R, Gerlt, J, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-10-31
Release date:2006-11-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Enolase from Agrobacterium Tumefaciens C58
To be Published
2E54
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BU of 2e54 by Molmil
Crystal structure of acetylornithine aminotransferase from Thermotoga maritima
Descriptor: 1,2-ETHANEDIOL, Acetylornithine aminotransferase, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-19
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of acetylornithine aminotransferase from Thermotoga maritima
To be Published
2E7U
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BU of 2e7u by Molmil
Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Thermus thermophilus HB8
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, GLYCEROL, Glutamate-1-semialdehyde 2,1-aminomutase, ...
Authors:Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-14
Release date:2007-07-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Thermus thermophilus HB8
To be Published
2QK9
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BU of 2qk9 by Molmil
Human RNase H catalytic domain mutant D210N in complex with 18-mer RNA/DNA hybrid
Descriptor: 5'-D(*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*GP*CP*AP*CP*T)-3', 5'-R(*AP*GP*UP*GP*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*C)-3', CITRATE ANION, ...
Authors:Nowotny, M, Gaidamakov, S.A, Ghirlando, R, Cerritelli, S.M, Crouch, R.J, Yang, W.
Deposit date:2007-07-10
Release date:2007-11-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure of Human RNase H1 Complexed with an RNA/DNA Hybrid: Insight into HIV Reverse Transcription
Mol.Cell, 28, 2007
2R37
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BU of 2r37 by Molmil
Crystal structure of human glutathione peroxidase 3 (selenocysteine to glycine mutant)
Descriptor: CHLORIDE ION, Glutathione peroxidase 3, SODIUM ION
Authors:Pilka, E.S, Guo, K, Gileadi, O, Rojkowa, A, von Delft, F, Pike, A.C.W, Kavanagh, K.L, Johannson, C, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2007-08-29
Release date:2007-09-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of human glutathione peroxidase 3 (selenocysteine to glycine mutant).
TO BE PUBLISHED
6WOX
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BU of 6wox by Molmil
Thermus thermophilus RNA polymerase initially transcribing complex with 2'dCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (25-MER), DNA (5'-D(P*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*GP*CP*AP*G)-3'), ...
Authors:Shin, Y, Murakami, K.S.
Deposit date:2020-04-26
Release date:2020-06-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:The mechanism of the nucleo-sugar selection by multi-subunit RNA polymerases.
Nat Commun, 12, 2021
3V3R
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BU of 3v3r by Molmil
Crystal Structure of GES-11
Descriptor: Extended spectrum class A beta-lactamase GES-11, IODIDE ION, SODIUM ION
Authors:Delbruck, H, Hoffmann, K.M.V, Bebrone, C.
Deposit date:2011-12-14
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Kinetic and crystallographic studies of extended-spectrum GES-11, GES-12, and GES-14 beta-lactamases.
Antimicrob.Agents Chemother., 56, 2012
6WSA
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BU of 6wsa by Molmil
Crystal structure of a betaine aldehyde dehydrogenase from Burkholderia pseudomallei without cofactor
Descriptor: 1,2-ETHANEDIOL, NAD/NADP-dependent betaine aldehyde dehydrogenase, SODIUM ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-04-30
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of betaine aldehyde dehydrogenase from Burkholderia pseudomallei.
Acta Crystallogr.,Sect.F, 78, 2022
5X7G
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BU of 5x7g by Molmil
Crystal Structure of Paenibacillus sp. 598K cycloisomaltooligosaccharide glucanotransferase
Descriptor: CALCIUM ION, Cycloisomaltooligosaccharide glucanotransferase, GLYCEROL, ...
Authors:Fujimoto, Z, Kishine, N, Suzuki, N, Suzuki, R, Momma, M, Funane, K.
Deposit date:2017-02-26
Release date:2017-04-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Isomaltooligosaccharide-binding structure ofPaenibacillussp. 598K cycloisomaltooligosaccharide glucanotransferase
Biosci. Rep., 37, 2017
6WU3
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BU of 6wu3 by Molmil
Structure of VcINDY-Na+ in amphipol
Descriptor: VcINDY
Authors:Sauer, D.B, Marden, J.J, Song, J.M, Wang, D.N.
Deposit date:2020-05-04
Release date:2020-09-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Structural basis for the reaction cycle of DASS dicarboxylate transporters.
Elife, 9, 2020
6WYF
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BU of 6wyf by Molmil
Crystal structure of Human H-chain Ferritin variant 157C Delta C-star Modified with a RAFT Agent Soaked in an Acrylate Solution
Descriptor: CALCIUM ION, FE (III) ION, Ferritin heavy chain, ...
Authors:Bailey, J.B, Zhang, L.
Deposit date:2020-05-12
Release date:2020-11-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Anisotropic Dynamics and Mechanics of Macromolecular Crystals Containing Lattice-Patterned Polymer Networks.
J.Am.Chem.Soc., 142, 2020

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