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6TDY
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BU of 6tdy by Molmil
Cryo-EM structure of Euglena gracilis mitochondrial ATP synthase, OSCP/F1/c-ring in rotational state 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Muhleip, A, Amunts, A.
Deposit date:2019-11-10
Release date:2019-11-27
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Structure of a mitochondrial ATP synthase with bound native cardiolipin.
Elife, 8, 2019
9D1O
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BU of 9d1o by Molmil
Lucilia cuprina alpha esterase 7 directed evolution round 4
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Frkic, R.L, Fraser, N, Mabbitt, P.D, Jackson, C.J.
Deposit date:2024-08-07
Release date:2025-08-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Lucilia cuprina alpha esterase 7 directed evolution round 4
To Be Published
9D1N
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BU of 9d1n by Molmil
Lucilia cuprina alpha esterase 7 directed evolution round 3
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Frkic, R.L, Fraser, N, Mabbitt, P.D, Jackson, C.J.
Deposit date:2024-08-07
Release date:2025-08-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Lucilia cuprina alpha esterase 7 directed evolution round 3
To Be Published
6DFR
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BU of 6dfr by Molmil
CRYSTAL STRUCTURES OF ESCHERICHIA COLI DIHYDROFOLATE REDUCTASE. THE NADP+ HOLOENZYME AND THE FOLATE(DOT)NADP+ TERNARY COMPLEX. SUBSTRATE BINDING AND A MODEL FOR THE TRANSITION STATE
Descriptor: CALCIUM ION, DIHYDROFOLATE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Bystroff, C, Oatley, S.J, Kraut, J.
Deposit date:1988-10-21
Release date:1990-07-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of Escherichia coli dihydrofolate reductase: the NADP+ holoenzyme and the folate.NADP+ ternary complex. Substrate binding and a model for the transition state.
Biochemistry, 29, 1990
8R32
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BU of 8r32 by Molmil
Crystal structure of the GluK2 ligand-binding domain in complex with L-glutamate and BPAM344 at 1.60 A resolution
Descriptor: 4-cyclopropyl-7-fluoro-3,4-dihydro-2H-1,2,4-benzothiadiazine 1,1-dioxide, CHLORIDE ION, GLUTAMIC ACID, ...
Authors:Bay, Y, Jeppesen, M.E, Frydenvang, K, Kastrup, J.S.
Deposit date:2023-11-08
Release date:2024-09-18
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The positive allosteric modulator BPAM344 and L-glutamate introduce an active-like structure of the ligand-binding domain of GluK2.
Febs Lett., 598, 2024
9GXH
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BU of 9gxh by Molmil
Nanobody bound to TBA G-quadruplex
Descriptor: 1,2-ETHANEDIOL, Nanobody, POTASSIUM ION, ...
Authors:Hadzi, S, Pevec, M.
Deposit date:2024-09-30
Release date:2025-06-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of G-quadruplex recognition by a camelid antibody fragment.
Nucleic Acids Res., 53, 2025
6Q78
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BU of 6q78 by Molmil
The structure of GH26C from Muricauda sp. MAR_2010_75
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GH26C
Authors:Robb, C.S, Hehemann, J.H.
Deposit date:2018-12-13
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The structure of GH26C from Muricauda sp. MAR_2010_75
To Be Published
9DH0
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BU of 9dh0 by Molmil
The Cryo-EM structure of recombinantly expressed hUGDH in complex with UDP-4-keto-xylose
Descriptor: (2R,3R,4R)-3,4-dihydroxy-5-oxooxan-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name), UDP-glucose 6-dehydrogenase
Authors:Kadirvelraj, R, Walsh Jr, R.M, Wood, Z.W.
Deposit date:2024-09-03
Release date:2025-03-05
Last modified:2025-03-12
Method:ELECTRON MICROSCOPY (2.38 Å)
Cite:Cryo-EM Structure of Recombinantly Expressed hUGDH Unveils a Hidden, Alternative Allosteric Inhibitor.
Biochemistry, 64, 2025
6DVN
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BU of 6dvn by Molmil
Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with DDK-137
Descriptor: 1,2-ETHANEDIOL, Hdac6 protein, N-[2-(benzylamino)-2-oxoethyl]-4-(dimethylamino)-N-{[4-(hydroxycarbamoyl)phenyl]methyl}benzamide, ...
Authors:Osko, J.D, Christianson, D.W.
Deposit date:2018-06-24
Release date:2018-08-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Histone Deacetylase 6-Selective Inhibitors and the Influence of Capping Groups on Hydroxamate-Zinc Denticity.
J. Med. Chem., 61, 2018
6QHO
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BU of 6qho by Molmil
Dual specificity mitogen-activated protein kinase kinase 7 in complex with pyrazolopyrimidine 1a
Descriptor: 1-[(3~{R})-3-(4-azanylpyrazolo[3,4-d]pyrimidin-1-yl)piperidin-1-yl]propan-1-one, Dual specificity mitogen-activated protein kinase kinase 7
Authors:Wolle, P, Mueller, M.P, Rauh, D.
Deposit date:2019-01-17
Release date:2019-05-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Characterization of Covalent Pyrazolopyrimidine-MKK7 Complexes and a Report on a Unique DFG-in/Leu-in Conformation of Mitogen-Activated Protein Kinase Kinase 7 (MKK7).
J.Med.Chem., 62, 2019
8Z11
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BU of 8z11 by Molmil
Cryo-EM structure of haptophyte photosystem I
Descriptor: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:He, F.Y, Zhao, L.S, Li, K, Zhang, Y.Z, Liu, L.N.
Deposit date:2024-04-10
Release date:2025-01-22
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Structural insights into the assembly and energy transfer of haptophyte photosystem I-light-harvesting supercomplex.
Proc.Natl.Acad.Sci.USA, 121, 2024
8AGP
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BU of 8agp by Molmil
Halogenated product of limonene epoxide turnover by epoxide hydrolase from metagenomic source ch65
Descriptor: (1~{S},2~{S},4~{R})-2-chloranyl-1-methyl-4-prop-1-en-2-yl-cyclohexan-1-ol, 1,2-ETHANEDIOL, Alpha/beta epoxide hydrolase, ...
Authors:Isupov, M.N, De Rose, S.A, Mitchell, D, Littlechild, J.A.
Deposit date:2022-07-20
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Complexes of epoxide hydrolase from metagenomic source ch65
To Be Published
6ECP
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BU of 6ecp by Molmil
The human methylenetetrahydrofolate dehydrogenase/cyclohydrolase (FolD) complexed with NADP and inhibitor LY249543
Descriptor: Methylenetetrahydrofolate dehydrogenase cyclohydrolase, N-(4-{2-[(6S)-2-amino-4-oxo-1,4,5,6,7,8-hexahydropyrido[2,3-d]pyrimidin-6-yl]ethyl}benzoyl)-L-glutamic acid, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Bueno, R.V, Dawson, A, Hunter, W.N.
Deposit date:2018-08-08
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An assessment of three human methylenetetrahydrofolate dehydrogenase/cyclohydrolase-ligand complexes following further refinement.
Acta Crystallogr F Struct Biol Commun, 75, 2019
1LRT
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BU of 1lrt by Molmil
CRYSTAL STRUCTURE OF TERNARY COMPLEX OF TRITRICHOMONAS FOETUS INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE: STRUCTURAL CHARACTERIZATION OF NAD+ SITE IN MICROBIAL ENZYME
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-METHYLENE-THIAZOLE-4-CARBOXYAMIDE-ADENINE DINUCLEOTIDE, INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE, ...
Authors:Gan, L, Petsko, G.A, Hedstrom, L.
Deposit date:2002-05-15
Release date:2003-07-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a ternary complex of Tritrichomonas foetus inosine 5'-monophosphate dehydrogenase: NAD+ orients the active site loop for catalysis
Biochemistry, 41, 2003
6JWL
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BU of 6jwl by Molmil
Crystal structure of EGFR 696-1022 L858R in complex with AZD9291
Descriptor: Epidermal growth factor receptor, N-(2-{[2-(dimethylamino)ethyl](methyl)amino}-4-methoxy-5-{[4-(1-methyl-1H-indol-3-yl)pyrimidin-2-yl]amino}phenyl)prop-2-enamide
Authors:Yun, C.H, Zhu, S.J, Yan, X.E.
Deposit date:2019-04-21
Release date:2020-04-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:Structural Basis of AZD9291 Selectivity for EGFR T790M.
J.Med.Chem., 63, 2020
6QFT
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BU of 6qft by Molmil
Structure of the mitogen activated kinase kinase 7 in complex with pyrazolopyrimidin 1b
Descriptor: 1-[(3~{R})-3-(4-azanyl-3-iodanyl-pyrazolo[3,4-d]pyrimidin-1-yl)piperidin-1-yl]propan-1-one, Dual specificity mitogen-activated protein kinase kinase 7
Authors:Wolle, P, Mueller, M.P, Rauh, D.
Deposit date:2019-01-10
Release date:2019-05-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Characterization of Covalent Pyrazolopyrimidine-MKK7 Complexes and a Report on a Unique DFG-in/Leu-in Conformation of Mitogen-Activated Protein Kinase Kinase 7 (MKK7).
J.Med.Chem., 62, 2019
7QXK
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BU of 7qxk by Molmil
As isolated MSOX movie series dataset 1 (0.4 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain)
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
Authors:Rose, S.L, Baba, S, Okumura, H, Antonyuk, S.V, Sasaki, D, Tosha, T, Kumasaka, T, Eady, R.R, Yamamoto, M, Hasnain, S.S.
Deposit date:2022-01-26
Release date:2022-08-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases.
Proc.Natl.Acad.Sci.USA, 119, 2022
5KDT
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BU of 5kdt by Molmil
Structure of the human GluN1/GluN2A LBD in complex with GNE0723
Descriptor: (1~{R},2~{R})-2-[7-[[5-chloranyl-3-(trifluoromethyl)pyrazol-1-yl]methyl]-5-oxidanylidene-2-(trifluoromethyl)-[1,3]thiazolo[3,2-a]pyrimidin-3-yl]cyclopropane-1-carbonitrile, ACETATE ION, GLUTAMIC ACID, ...
Authors:Wallweber, H.J.A, Lupardus, P.J.
Deposit date:2016-06-08
Release date:2016-07-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Discovery of GluN2A-Selective NMDA Receptor Positive Allosteric Modulators (PAMs): Tuning Deactivation Kinetics via Structure-Based Design.
J. Med. Chem., 59, 2016
9GJX
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BU of 9gjx by Molmil
Bacillus licheniformis nitroreductase
Descriptor: 1,2-ETHANEDIOL, 5-(AZIRIDIN-1-YL)-2,4-DINITROBENZAMIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Crennell, S.J, Danson, M.J, Emptage, C.
Deposit date:2024-08-23
Release date:2025-09-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Bacillus licheniformis nitroreductase and analysis of prodrug specificity
To Be Published
4ZF3
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BU of 4zf3 by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, H148D; circular permutant ( 50-51)
Descriptor: Green fluorescent protein
Authors:Oltrogge, L.M, Boxer, S.G.
Deposit date:2015-04-21
Release date:2015-06-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Short Hydrogen Bonds and Proton Delocalization in Green Fluorescent Protein (GFP).
Acs Cent.Sci., 1, 2015
8WFM
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BU of 8wfm by Molmil
Crystal structure of Omicron BA.1 in complex with a neutralizing antibody scFv T11
Descriptor: Spike protein S1, T11 scFv
Authors:Terekhov, S.S, Mokrushina, Y.A, Zhang, M, Zhang, N, Gabibov, A, Guo, Y.
Deposit date:2023-09-19
Release date:2024-09-25
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Crystal structure of Omicron BA.1 in complex with a neutralizing antibody scFv T11
To Be Published
1LXC
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BU of 1lxc by Molmil
Crystal Structure of E. Coli Enoyl Reductase-NAD+ with a Bound Acrylamide Inhibitor
Descriptor: 3-(6-AMINOPYRIDIN-3-YL)-N-METHYL-N-[(1-METHYL-1H-INDOL-2-YL)METHYL]ACRYLAMIDE, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Miller, W.H, Seefeld, M.A, Newlander, K.A, Uzinskas, I.N, Burgess, W.J, Heerding, D.A, Yuan, C.C.K, Head, M.S, Payne, D.J, Rittenhouse, S.F, Moore, T.D, Pearson, S.C, Dewolf, V, Berry, W.E, Keller, P.M, Polizzi, B.J, Qiu, X, Janson, C.A, Huffman, W.F.
Deposit date:2002-06-05
Release date:2002-09-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of aminopyridine-based inhibitors of bacterial enoyl-ACP reductase (FabI).
J.Med.Chem., 45, 2002
8DT5
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BU of 8dt5 by Molmil
X-ray structure of human acetylcholinesterase ternary complex with paraoxon and oxime RS170B (POX-hAChE-RS170B)
Descriptor: 4-carbamoyl-1-(3-{2-[(E)-(hydroxyimino)methyl]-1H-imidazol-1-yl}propyl)pyridin-1-ium, Acetylcholinesterase, DIETHYL PHOSPHONATE, ...
Authors:Kovalevsky, A.Y, Gerlits, O, Radic, Z.
Deposit date:2022-07-25
Release date:2022-11-02
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and dynamic effects of paraoxon binding to human acetylcholinesterase by X-ray crystallography and inelastic neutron scattering.
Structure, 30, 2022
6A0I
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BU of 6a0i by Molmil
Crystal structure of human protein N-terminal asparagine amidohydrolase (NTAN1) C75S mutant
Descriptor: GLYCEROL, PHOSPHATE ION, Protein N-terminal asparagine amidohydrolase
Authors:Park, J.S, Han, B.W.
Deposit date:2018-06-05
Release date:2019-12-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.996 Å)
Cite:Structural Analyses on the Deamidation of N-Terminal Asn in the Human N-Degron Pathway.
Biomolecules, 10, 2020
6HIB
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BU of 6hib by Molmil
The ATAD2 bromodomain in complex with compound 14
Descriptor: 1-azanyl-~{N}-[5-(5-azanylpyridin-3-yl)-4-ethanoyl-1,3-thiazol-2-yl]cyclobutane-1-carboxamide, ATPase family AAA domain-containing protein 2, SULFATE ION
Authors:Sledz, P, Caflisch, A.
Deposit date:2018-08-29
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.029 Å)
Cite:Hitting a Moving Target: Simulation and Crystallography Study of ATAD2 Bromodomain Blockers.
Acs Med.Chem.Lett., 11, 2020

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