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3FOO
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BU of 3foo by Molmil
A Triangular Cytochrome b562 Superstructure Mediated by Ni Coordination - Monoclinic Form
Descriptor: N-1,10-phenanthrolin-5-ylacetamide, NICKEL (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Radford, R.J, Tezcan, F.A.
Deposit date:2008-12-30
Release date:2009-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A superprotein triangle driven by nickel(II) coordination: exploiting non-natural metal ligands in protein self-assembly
J.Am.Chem.Soc., 131, 2009
3ASV
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BU of 3asv by Molmil
The Closed form of serine dehydrogenase complexed with NADP+
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PHOSPHATE ION, Short-chain dehydrogenase/reductase SDR
Authors:Yamazawa, R, Nakajima, Y, Yoshimoto, T, Ito, K.
Deposit date:2010-12-21
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of serine dehydrogenase from Escherichia coli: important role of the C-terminal region for closed-complex formation.
J.Biochem., 149, 2011
1KG8
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BU of 1kg8 by Molmil
X-ray structure of an early-M intermediate of bacteriorhodopsin
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, RETINAL, bacteriorhodopsin
Authors:Facciotti, M.T, Rouhani, S, Burkard, F.T, Betancourt, F.M, Downing, K.H, Rose, R.B, McDermott, G, Glaeser, R.M.
Deposit date:2001-11-26
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of an early intermediate in the M-state phase of the bacteriorhodopsin photocycle.
Biophys.J., 81, 2001
2PPX
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BU of 2ppx by Molmil
Crystal structure of a HTH XRE-family like protein from Agrobacterium tumefaciens
Descriptor: GLYCEROL, SULFATE ION, Uncharacterized protein Atu1735
Authors:Cuff, M.E, Skarina, T, Onopriyenko, O, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-04-30
Release date:2007-05-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a HTH XRE-family like protein from Agrobacterium tumefaciens.
TO BE PUBLISHED
1KGM
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BU of 1kgm by Molmil
SOLUTION STRUCTURE OF THE SMALL SERINE PROTEASE INHIBITOR SGCI
Descriptor: SERINE PROTEASE INHIBITOR I
Authors:Gaspari, Z, Patthy, A, Graf, L, Perczel, A.
Deposit date:2001-11-28
Release date:2001-12-12
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Comparative structure analysis of proteinase inhibitors from the desert locust, Schistocerca gregaria.
Eur.J.Biochem., 269, 2002
1KNI
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Stabilizing Disulfide Bridge Mutant of T4 Lysozyme
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, LYSOZYME
Authors:Jacobson, R.H, Matsumura, M, Faber, H.R, Matthews, B.W.
Deposit date:2001-12-18
Release date:2001-12-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a stabilizing disulfide bridge mutant that closes the active-site cleft of T4 lysozyme.
Protein Sci., 1, 1992
3FQ4
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BU of 3fq4 by Molmil
Crystal structure of the Calx-beta domain of integrin beta4
Descriptor: Integrin beta-4
Authors:Alonso-Garcia, N, Ingles-Prieto, A, de Pereda, J.M.
Deposit date:2009-01-07
Release date:2009-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.487 Å)
Cite:Structure of the Calx-beta domain of the integrin beta4 subunit: insights into function and cation-independent stability
Acta Crystallogr.,Sect.D, 65, 2009
1KOZ
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BU of 1koz by Molmil
SOLUTION STRUCTURE OF OMEGA-GRAMMOTOXIN SIA
Descriptor: Voltage-dependent Channel Inhibitor
Authors:Takeuchi, K, Park, E.J, Lee, C.W, Kim, J.I, Takahashi, H, Swartz, K.J, Shimada, I.
Deposit date:2001-12-25
Release date:2002-08-28
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of omega-grammotoxin SIA, a gating modifier of P/Q and N-type Ca(2+) channel.
J.Mol.Biol., 321, 2002
1KPU
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BU of 1kpu by Molmil
High resolution crystal structure of the MHC class I complex H-2Kb/VSV8
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rudolph, M.G, Wilson, I.A.
Deposit date:2002-01-02
Release date:2003-06-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High Resolution Crystal Structure of H-2Kb/VSV8
To be Published
3U2U
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Crystal Structure of Human Glycogenin-1 (GYG1) complexed with manganese, UDP and maltotetraose
Descriptor: GLYCEROL, Glycogenin-1, MANGANESE (II) ION, ...
Authors:Chaikuad, A, Froese, D.S, Krysztofinska, E, von Delft, F, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Oppermann, U, Yue, W.W, Structural Genomics Consortium (SGC)
Deposit date:2011-10-04
Release date:2011-11-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Conformational plasticity of glycogenin and its maltosaccharide substrate during glycogen biogenesis.
Proc.Natl.Acad.Sci.USA, 108, 2011
1KKL
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L.casei HprK/P in complex with B.subtilis HPr
Descriptor: CALCIUM ION, HprK protein, PHOSPHOCARRIER PROTEIN HPR
Authors:Fieulaine, S, Morera, S, Poncet, S, Galinier, A, Janin, J, Deutscher, J, Nessler, S.
Deposit date:2001-12-10
Release date:2002-08-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-ray structure of a bifunctional protein kinase in complex with its protein substrate HPr.
Proc.Natl.Acad.Sci.USA, 99, 2002
3F2E
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BU of 3f2e by Molmil
Crystal structure of Yellowstone SIRV coat protein C-terminus
Descriptor: CITRIC ACID, SIRV coat protein
Authors:Taurog, R.E, Szymczyna, B.R, Williamson, J.R, Johnson, J.E.
Deposit date:2008-10-29
Release date:2009-04-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.668 Å)
Cite:Synergy of NMR, computation, and X-ray crystallography for structural biology.
Structure, 17, 2009
3UBQ
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Influenza hemagglutinin from the 2009 pandemic in complex with ligand 3SLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, ...
Authors:Xu, R, Wilson, I.A.
Deposit date:2011-10-24
Release date:2011-11-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of the Hemagglutinin Receptor Specificity from the 2009 H1N1 Influenza Pandemic.
J.Virol., 86, 2012
1KRJ
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BU of 1krj by Molmil
Engineering Calcium-binding site into Cytochrome c Peroxidase (CcP)
Descriptor: Cytochrome c Peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bonagura, C.A, Bhaskar, B, Sundaramoorthy, M, Poulos, T.L.
Deposit date:2002-01-09
Release date:2002-01-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conversion of an engineered potassium-binding site into a calcium-selective site in cytochrome c peroxidase.
J.Biol.Chem., 274, 1999
3GLF
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BU of 3glf by Molmil
Crystal Structure of the Ecoli Clamp Loader Bound to Primer-Template DNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (5'-D(*CP*TP*GP*GP*CP*CP*TP*AP*TP*A)-3'), ...
Authors:Simonetta, K.R, Kuriyan, J.
Deposit date:2009-03-12
Release date:2009-05-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.388 Å)
Cite:The mechanism of ATP-dependent primer-template recognition by a clamp loader complex.
Cell(Cambridge,Mass.), 137, 2009
2QCU
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BU of 2qcu by Molmil
Crystal structure of Glycerol-3-phosphate Dehydrogenase from Escherichia coli
Descriptor: 1,2-ETHANEDIOL, Aerobic glycerol-3-phosphate dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Yeh, J.I, Chinte, U, Du, S.
Deposit date:2007-06-19
Release date:2008-04-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of glycerol-3-phosphate dehydrogenase, an essential monotopic membrane enzyme involved in respiration and metabolism.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3GVD
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BU of 3gvd by Molmil
Crystal Structure of Serine Acetyltransferase CysE from Yersinia pestis
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, ACETIC ACID, CYSTEINE, ...
Authors:Kim, Y, Zhou, M, Peterson, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-03-30
Release date:2009-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Serine Acetyltransferase CysE from Yersinia pestis
To be Published
3H06
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BU of 3h06 by Molmil
Crystal structure of the binding domain of the AMPA subunit GluR2 bound to the willardiine antagonist, UBP282
Descriptor: 4-({3-[(2R)-2-amino-2-carboxyethyl]-2,6-dioxo-3,6-dihydropyrimidin-1(2H)-yl}methyl)benzoic acid, Glutamate receptor 2
Authors:Ahmed, A.H, Oswald, R.E.
Deposit date:2009-04-08
Release date:2009-05-05
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanisms of antagonism of the GluR2 AMPA receptor: structure and dynamics of the complex of two willardiine antagonists with the glutamate binding domain.
Biochemistry, 48, 2009
2QGA
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BU of 2qga by Molmil
Plasmodium vivax adenylosuccinate lyase Pv003765 with AMP bound
Descriptor: ADENOSINE MONOPHOSPHATE, Adenylosuccinate lyase, CALCIUM ION, ...
Authors:Lunin, V.V, Wernimont, A.K, Lew, J, Kozieradzki, I, Bochkarev, A, Arrowsmith, C.H, Sundstrom, M, Weigelt, J, Edwards, A.E, Hui, R, Hills, T, Altamentova, S, Structural Genomics Consortium (SGC)
Deposit date:2007-06-28
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Plasmodium vivax adenylosuccinate lyase Pv003765 with AMP bound
To be Published
2QJI
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M. jannaschii ADH synthase complexed with dihydroxyacetone phosphate and glycerol
Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, GLYCEROL, Putative aldolase MJ0400
Authors:Ealick, S.E, Morar, M.
Deposit date:2007-07-07
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid synthase, a catalyst in the archaeal pathway for the biosynthesis of aromatic amino acids.
Biochemistry, 46, 2007
1KG9
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BU of 1kg9 by Molmil
Structure of a "mock-trapped" early-M intermediate of bacteriorhosopsin
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, RETINAL, bacteriorhodopsin
Authors:Facciotti, M.T, Rouhani, S, Burkard, F.T, Betancourt, F.M, Downing, K.H, Rose, R.B, McDermott, G, Glaeser, R.M.
Deposit date:2001-11-26
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure of an early intermediate in the M-state phase of the bacteriorhodopsin photocycle.
Biophys.J., 81, 2001
1KRI
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BU of 1kri by Molmil
NMR Solution Structures of the Rhesus Rotavirus VP4 Sialic Acid Binding Domain without Ligand
Descriptor: VP4
Authors:Dormitzer, P.R, Sun, Z.-Y.J, Wagner, G, Harrison, S.C.
Deposit date:2002-01-09
Release date:2002-03-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The Rhesus Rotavirus VP4 Sialic Acid Binding Domain has a Galectin Fold with a Novel Carbohydrate Binding Site
Embo J., 21, 2002
3C3Z
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BU of 3c3z by Molmil
Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycin
Descriptor: HIV-1 subtype F genomic RNA, RIBOSTAMYCIN
Authors:Freisz, S, Lang, K, Micura, R, Dumas, P, Ennifar, E.
Deposit date:2008-01-29
Release date:2008-05-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site.
Angew.Chem.Int.Ed.Engl., 47, 2008
3U33
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BU of 3u33 by Molmil
Crystal Structure of the E. coli adaptive response protein AidB in the space group P3(2)
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Putative acyl-CoA dehydrogenase AidB
Authors:Wong, C, Jost, M, Drennan, C.L.
Deposit date:2011-10-04
Release date:2011-11-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Flavin-induced oligomerization in Escherichia coli adaptive response protein AidB.
Biochemistry, 50, 2011
2QJK
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Crystal Structure Analysis of mutant rhodobacter sphaeroides bc1 with stigmatellin and antimycin
Descriptor: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE, (2R,3S,6S,7R,8R)-3-{[3-(FORMYLAMINO)-2-HYDROXYBENZOYL]AMINO}-8-HEXYL-2,6-DIMETHYL-4,9-DIOXO-1,5-DIOXONAN-7-YL (2S)-2-METHYLBUTANOATE, 2-O-octyl-beta-D-glucopyranose, ...
Authors:Esser, L.
Deposit date:2007-07-07
Release date:2007-12-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Inhibitor-complexed structures of the cytochrome bc1 from the photosynthetic bacterium Rhodobacter sphaeroides.
J.Biol.Chem., 283, 2008

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