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2E2C
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E2-C, AN UBIQUITIN CONJUGATING ENZYME REQUIRED FOR THE DESTRUCTION OF MITOTIC CYCLINS
Descriptor: UBIQUITIN CONJUGATING ENZYME
Authors:Jiang, F, Basavappa, R.
Deposit date:1999-01-19
Release date:1999-01-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the cyclin-specific ubiquitin-conjugating enzyme from clam, E2-C, at 2.0 A resolution.
Biochemistry, 38, 1999
2E2D
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Flexibility and variability of TIMP binding: X-ray structure of the complex between collagenase-3/MMP-13 and TIMP-2
Descriptor: CALCIUM ION, Matrix metallopeptidase 13, Metalloproteinase inhibitor 2, ...
Authors:Maskos, K, Lang, R, Tschesche, H, Bode, W.
Deposit date:2006-11-11
Release date:2007-03-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Flexibility and Variability of TIMP Binding: X-ray Structure of the Complex Between Collagenase-3/MMP-13 and TIMP-2
J.Mol.Biol., 366, 2007
2E2E
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TPR domain of NrfG mediates the complex formation between heme lyase and formate-dependent nitrite reductase in Escherichia Coli O157:H7
Descriptor: BETA-MERCAPTOETHANOL, Formate-dependent nitrite reductase complex nrfG subunit, IMIDAZOLE
Authors:Han, D, Kim, K, Oh, J, Park, J, Kim, Y.
Deposit date:2006-11-11
Release date:2007-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:TPR domain of NrfG mediates complex formation between heme lyase and formate-dependent nitrite reductase in Escherichia coli O157:H7.
Proteins, 70, 2008
2E2F
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Solution structure of DSP
Descriptor: Diapausin
Authors:Kouno, T, Mizuguchi, M, Suzuki, K, Kawano, K.
Deposit date:2006-11-12
Release date:2007-11-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The structure of a novel insect peptide explains its Ca2+ channel blocking and antifungal activities
Biochemistry, 46, 2007
2E2G
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Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (pre-oxidation form)
Descriptor: Probable peroxiredoxin
Authors:Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T.
Deposit date:2006-11-13
Release date:2007-11-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
2E2H
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RNA polymerase II elongation complex at 5 mM Mg2+ with GTP
Descriptor: 28-MER DNA template strand, 5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3', 5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3', ...
Authors:Wang, D, Bushnell, D.A, Westover, K.D, Kaplan, C.D, Kornberg, R.D.
Deposit date:2006-11-14
Release date:2006-12-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.95 Å)
Cite:Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
Cell(Cambridge,Mass.), 127, 2006
2E2I
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RNA polymerase II elongation complex in 5 mM Mg+2 with 2'-dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 28-MER DNA template strand, 5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3', ...
Authors:Wang, D, Bushnell, D.A, Westover, K.D, Kaplan, C.D, Kornberg, R.D.
Deposit date:2006-11-14
Release date:2006-12-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
Cell(Cambridge,Mass.), 127, 2006
2E2J
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RNA polymerase II elongation complex in 5 mM Mg+2 with GMPCPP
Descriptor: 27-MER DNA template strand, 5'-D(P*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*A)-3', 5'-R(P*AP*UP*CP*GP*AP*GP*AP*GP*G)-3', ...
Authors:Wang, D, Bushnell, D.A, Westover, K.D, Kaplan, C.D, Kornberg, R.D.
Deposit date:2006-11-14
Release date:2006-12-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
Cell(Cambridge,Mass.), 127, 2006
2E2K
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Helicobacter pylori formamidase AmiF contains a fine-tuned cysteine-glutamate-lysine catalytic triad
Descriptor: Formamidase
Authors:Wang, W.C, Hung, C.L.
Deposit date:2006-11-14
Release date:2007-02-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Helicobacter pylori formamidase AmiF reveals a cysteine-glutamate-lysine catalytic triad
J.Biol.Chem., 282, 2007
2E2L
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Helicobacter pylori formamidase AmiF contains a fine-tuned cysteine-glutamate-lysine catalytic triad
Descriptor: FORMAMIDE, Formamidase
Authors:Wang, W.C, Hung, C.L.
Deposit date:2006-11-14
Release date:2007-02-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of Helicobacter pylori formamidase AmiF reveals a cysteine-glutamate-lysine catalytic triad
J.Biol.Chem., 282, 2007
2E2M
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Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (sulfinic acid form)
Descriptor: Probable peroxiredoxin
Authors:Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T.
Deposit date:2006-11-14
Release date:2007-11-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
2E2N
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Crystal structure of Sulfolobus tokodaii hexokinase in the apo form
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEXOKINASE, SULFATE ION
Authors:Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T.
Deposit date:2006-11-15
Release date:2007-01-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii.
J.Biol.Chem., 282, 2007
2E2O
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Crystal structure of Sulfolobus tokodaii hexokinase in complex with glucose
Descriptor: HEXOKINASE, beta-D-glucopyranose
Authors:Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T.
Deposit date:2006-11-15
Release date:2007-01-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii.
J.Biol.Chem., 282, 2007
2E2P
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Crystal structure of Sulfolobus tokodaii hexokinase in complex with ADP
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, HEXOKINASE, ...
Authors:Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T.
Deposit date:2006-11-15
Release date:2007-01-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii.
J.Biol.Chem., 282, 2007
2E2Q
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Crystal structure of Sulfolobus tokodaii hexokinase in complex with xylose, Mg2+, and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, HEXOKINASE, MAGNESIUM ION, ...
Authors:Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T.
Deposit date:2006-11-15
Release date:2007-01-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii.
J.Biol.Chem., 282, 2007
2E2R
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Crystal structure of human estrogen-related receptor gamma ligand binding domain complex with bisphenol A
Descriptor: 4,4'-PROPANE-2,2-DIYLDIPHENOL, Estrogen-related receptor gamma, GLYCEROL
Authors:Matsushima, A, Kakuta, Y, Teramoto, T, Koshiba, T, Kimura, M, Shimohigashi, Y.
Deposit date:2006-11-16
Release date:2007-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Evidence for Endocrine Disruptor Bisphenol A Binding to Human Nuclear Receptor ERR{gamma}
J.Biochem.(Tokyo), 142, 2007
2E2S
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Solution structure of agelenin, an insecticidal peptide from the venom of Agelena opulenta
Descriptor: Agelenin
Authors:Yamaji, N.
Deposit date:2006-11-17
Release date:2007-08-07
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of agelenin, an insecticidal peptide isolated from the spider Agelena opulenta, and its structural similarities to insect-specific calcium channel inhibitors
Febs Lett., 581, 2007
2E2T
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Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with phenylhydrazine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Kuroda, S, Hayashi, H, Tanizawa, K.
Deposit date:2006-11-17
Release date:2007-11-20
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
2E2U
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Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with 4-hydroxybenzylhydrazine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Hayashi, H, Tanizawa, K.
Deposit date:2006-11-17
Release date:2007-11-20
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
2E2V
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Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with benzylhydrazine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Kuroda, S, Hayashi, H, Tanizawa, K.
Deposit date:2006-11-17
Release date:2007-11-20
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
2E2W
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Solution structure of the first BRCT domain of human DNA ligase IV
Descriptor: DNA ligase 4
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-11-17
Release date:2006-12-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the first BRCT domain of human DNA ligase IV
TO BE PUBLISHED
2E2X
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Sec14 Homology Module of Neurofibromin in complex with phosphatitylethanolamine
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Neurofibromin, PYROPHOSPHATE 2-
Authors:D'Angelo, I, Welti, S, Scheffzek, K.
Deposit date:2006-11-18
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The sec14 homology module of neurofibromin binds cellular glycerophospholipids: mass spectrometry and structure of a lipid complex
J.Mol.Biol., 366, 2007
2E2Y
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Crystal Structure of F43W/H64D/V68I Myoglobin
Descriptor: GLYCEROL, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ohki, T, Ueno, T, Hikage, T, Suzuki, A, Yamane, T, Watanabe, Y.
Deposit date:2006-11-18
Release date:2007-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Reactivities of oxo and peroxo intermediates studied by hemoprotein mutants
Acc.Chem.Res., 40, 2007
2E2Z
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Solution NMR structure of yeast Tim15, co-chaperone of mitochondrial Hsp70
Descriptor: Tim15, ZINC ION
Authors:Momose, T, Ohshima, C, Maeda, M, Endo, T.
Deposit date:2006-11-19
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural basis of functional cooperation of Tim15/Zim17 with yeast mitochondrial Hsp70
Embo Rep., 8, 2007
2E30
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Solution structure of the cytoplasmic region of Na+/H+ exchanger 1 complexed with essential cofactor calcineurin B homologous protein 1
Descriptor: CALCIUM ION, Calcium-binding protein p22, Sodium/hydrogen exchanger 1
Authors:Mishima, M, Wakabayashi, S, Kojima, C.
Deposit date:2006-11-19
Release date:2006-12-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the cytoplasmic region of Na+/H+ exchanger 1 complexed with essential cofactor calcineurin B homologous protein 1
J.Biol.Chem., 282, 2007

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