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1N0X
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BU of 1n0x by Molmil
Crystal Structure of a Broadly Neutralizing Anti-HIV-1 Antibody in Complex with a Peptide Mimotope
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, B2.1 peptide, GLYCEROL, ...
Authors:Saphire, E.O, Montero, M, Menendez, A, Irving, M.B, Zwick, M.B, Parren, P.W.H.I, Burton, D.R, Scott, J.K, Wilson, I.A.
Deposit date:2002-10-15
Release date:2004-04-13
Last modified:2017-06-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of a Broadly Neutralizing Anti-HIV-1 Antibody in Complex with a Peptide Mimotope
To be Published
2HFG
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BU of 2hfg by Molmil
Crystal structure of hBR3 bound to CB3s-Fab
Descriptor: CB3s Fab heavy chain, CB3s Fab light chain (kappa), Tumor necrosis factor receptor superfamily member 13C
Authors:Hymowitz, S.G.
Deposit date:2006-06-23
Release date:2006-11-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Synthetic anti-BR3 antibodies that mimic BAFF binding and target both human and murine B cells.
Blood, 108, 2006
5DUT
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BU of 5dut by Molmil
Influenza A virus H5 hemagglutinin globular head
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Zuo, T, Sun, J, Wang, G, Zhou, P, Wang, X, Zhang, L.
Deposit date:2015-09-20
Release date:2015-12-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Comprehensive analysis of antibody recognition in convalescent humans from highly pathogenic avian influenza H5N1 infection
Nat Commun, 6, 2015
4E9O
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BU of 4e9o by Molmil
Vaccinia D8L ectodomain structure
Descriptor: IMV membrane protein, IODIDE ION
Authors:Matho, M.H, Zajonc, D.M.
Deposit date:2012-03-21
Release date:2012-06-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural and Biochemical Characterization of the Vaccinia Virus Envelope Protein D8 and Its Recognition by the Antibody LA5.
J.Virol., 86, 2012
3IYW
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BU of 3iyw by Molmil
West Nile virus in complex with Fab fragments of MAb CR4354 (fitted coordinates of envelope proteins and Fab fragments of one icosahedral ASU)
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-alpha-D-glucopyranose, CR4354 Fab fragment X1, heavy chain H, ...
Authors:Rossmann, M.G, Kaufmann, B.
Deposit date:2010-06-18
Release date:2010-11-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (13.7 Å)
Cite:Neutralization of West Nile virus by cross-linking of its surface proteins with Fab fragments of the human monoclonal antibody CR4354.
Proc.Natl.Acad.Sci.USA, 107, 2010
6E3H
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BU of 6e3h by Molmil
Crystal structure of S9-3-37 bound to H5 influenza hemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Wu, N.C, Wilson, I.A.
Deposit date:2018-07-14
Release date:2018-09-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The D3-9 gene segment encodes for recurring and adaptable binding motifs in broadly neutralizing antibodies to influenza virus
Cell Host Microbe, 2018
7X38
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BU of 7x38 by Molmil
Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb 8A10 (CVB1-E:8A10)
Descriptor: 8A10 heavy chain, 8A10 light chain, VP2, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-02-28
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X3F
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BU of 7x3f by Molmil
Cryo-EM structure of Coxsackievirus B1 A-particle in complex with nAb 9A3 (CVB1-A:9A3)
Descriptor: 9A3 heavy chain, 9A3 light chain, VP2, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-02-28
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X42
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BU of 7x42 by Molmil
Cryo-EM structure of Coxsackievirus B1 pre-A-particle in complex with nAb 8A10 (classified from CVB1 mature virion in complex with 8A10 and 2E6)
Descriptor: 8A10 heavy chain, 8A10 light chain, Capsid protein VP0, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-01
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X49
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BU of 7x49 by Molmil
Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 8A10 (classified from CVB1 mature virion in complex with 8A10 and 9A3)
Descriptor: 8A10 heavy chain, 8A10 light chain, Capsid protein VP4, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-02
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X2W
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BU of 7x2w by Molmil
Cryo-EM structure of Coxsackievirus B1 pre-A particle in complex with nAb 8A10 (CVB1-pre-A:8A10)
Descriptor: 8A10 heavy chain, 8A10 light chain, Capsid protein VP4, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-02-26
Release date:2022-09-28
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X37
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BU of 7x37 by Molmil
Cryo-EM structure of Coxsackievirus B1 A particle in complex with nAb 2E6 (CVB1-A:2E6)
Descriptor: 2E6 heavy chain, 2E6 light chain, VP2, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-02-28
Release date:2022-09-28
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X40
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BU of 7x40 by Molmil
Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 8A10 (classified from CVB1 mature virion in complex with 8A10 and 2E6)
Descriptor: 8A10 heavy chain, 8A10 light chain, Capsid protein VP4, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-01
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X46
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BU of 7x46 by Molmil
Cryo-EM structure of Coxsackievirus B1 A-particle in complex with nAb 2E6 (classified from CVB1 mature virion in complex with 8A10 and 2E6)
Descriptor: 2E6 heavy chain, 2E6 light chain, VP2, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-02
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X47
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BU of 7x47 by Molmil
Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb 2E6 (classified from CVB1 mature virion in complex with 8A10 and 2E6)
Descriptor: 2E6 heavy chain, 2E6 light chain, Genome polyprotein, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-02
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X3C
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BU of 7x3c by Molmil
Cryo-EM structure of Coxsackievirus B1 muture virion in complex with nAbs 8A10 and 5F5 (CVB1-M:8A10:5F5)
Descriptor: 5F5 heavy chain, 5F5 light chain, 8A10 heavy chain, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-02-28
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X4K
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BU of 7x4k by Molmil
Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb 9A3 (classified from CVB1 mature virion in complex with 8A10 and 9A3)
Descriptor: 9A3 heavy chain, 9A3 light chain, Genome polyprotein, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-02
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.82 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
8DMI
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BU of 8dmi by Molmil
Lymphocytic choriomeningitis virus glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein G1, ...
Authors:Moon-Walker, A, Hastie, K.M, Zyla, D.S, Saphire, E.O.
Deposit date:2022-07-08
Release date:2023-04-12
Last modified:2023-05-03
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structural basis for antibody-mediated neutralization of lymphocytic choriomeningitis virus.
Cell Chem Biol, 30, 2023
7X4M
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BU of 7x4m by Molmil
Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 8A10 (classified from CVB1 mature virion in complex with 8A10, 2E6 and 9A3)
Descriptor: 8A10 heavy chain, 8A10 light chain, Capsid protein VP4, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-02
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X3Y
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BU of 7x3y by Molmil
Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb 9A3 (CVB1-E:9A3)
Descriptor: 9A3 heavy chain, 9A3 light chain, VP2, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-01
Release date:2023-06-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
1S4H
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BU of 1s4h by Molmil
NMR structure of cross-reactive peptides from L. braziliensis
Descriptor: 60S acidic ribosomal protein P2
Authors:Soares, M.R, Bisch, P.M, Campos de Carvalho, A.C, Valente, A.P, Almeida, F.C.L.
Deposit date:2004-01-16
Release date:2004-03-16
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Correlation between conformation and antibody binding: NMR structure of cross-reactive peptides from T. cruzi, human and L. braziliensis
Febs Lett., 560, 2004
7X35
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BU of 7x35 by Molmil
Cryo-EM structure of Coxsackievirus B1 A-particle in complex with nAb 8A10 (CVB1-A:8A10)
Descriptor: 8A10 heavy chain, 8A10 light chain, VP2, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-02-28
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
1S4J
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BU of 1s4j by Molmil
NMR structure of cross-reactive peptides from Homo sapiens
Descriptor: 60S acidic ribosomal protein P2
Authors:Soares, M.R, Bisch, P.M, Campos de Carvalho, A.C, Valente, A.P, Almeida, F.C.L.
Deposit date:2004-01-16
Release date:2004-03-16
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Correlation between conformation and antibody binding: NMR structure of cross-reactive peptides from T. cruzi, human and L. braziliensis
Febs Lett., 560, 2004
3NPS
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BU of 3nps by Molmil
Crystal structure of membrane-type serine protease 1 (MT-SP1) in complex with the Fab Inhibitor S4
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, S4 FAB HEAVY CHAIN, ...
Authors:Baharuddin, A.
Deposit date:2010-06-29
Release date:2011-07-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A reverse binding motif that contributes to specific protease inhibition by antibodies.
J.Mol.Biol., 415, 2012
4HFU
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BU of 4hfu by Molmil
Crystal structure of Fab 8M2 in complex with a H2N2 influenza virus hemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab 8M2 heavy chain, Fab 8M2 light chain, ...
Authors:Xu, R, Wilson, I.A.
Deposit date:2012-10-05
Release date:2013-02-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.106 Å)
Cite:A recurring motif for antibody recognition of the receptor-binding site of influenza hemagglutinin.
Nat.Struct.Mol.Biol., 20, 2013

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