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3JWP
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BU of 3jwp by Molmil
Crystal structure of Plasmodium falciparum SIR2A (PF13_0152) in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, TRIETHYLENE GLYCOL, Transcriptional regulatory protein sir2 homologue, ...
Authors:Wernimont, A.K, Hutchinson, A, Lin, Y.H, MacKenzie, F, Senisterra, G, Allali-Hassanali, A, Vedadi, M, Ravichandran, M, Cossar, D, Kozieradzki, I, Zhao, Y, Schapira, M, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Hui, R, Qiu, W, Brand, V, Structural Genomics Consortium (SGC)
Deposit date:2009-09-18
Release date:2009-10-20
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of Plasmodium falciparum SIR2A (PF13_0152) in complex with AMP
TO BE PUBLISHED
7QDV
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BU of 7qdv by Molmil
Crystal structure of outer surface protein BBA14 (OrfD) from Borrelia burgdorferi
Descriptor: BBA14 (OrfD)
Authors:Brangulis, K.
Deposit date:2021-11-30
Release date:2022-03-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Analysis of the Outer Membrane Lipoprotein BBA14 (OrfD) and the Corresponding Paralogous Gene Family 143 (PFam143) from Borrelia burgdorferi.
Pathogens, 11, 2022
7L8E
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BU of 7l8e by Molmil
BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-1 from animal Rh.33172 (Wk38 time point)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Antanasijevic, A, Sewall, L.M, Ward, A.B.
Deposit date:2020-12-31
Release date:2021-08-04
Last modified:2021-09-08
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM.
Nat Commun, 12, 2021
5M4L
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BU of 5m4l by Molmil
Crystal Structure of Wild-Type Human Prolidase with Mg ions and LeuPro ligand
Descriptor: GLYCEROL, HYDROXIDE ION, LEUCINE, ...
Authors:Wilk, P, Weiss, M.S, Mueller, U, Dobbek, H.
Deposit date:2016-10-18
Release date:2017-07-12
Last modified:2020-04-22
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Substrate specificity and reaction mechanism of human prolidase.
FEBS J., 284, 2017
6ZN0
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BU of 6zn0 by Molmil
Crystal structure of cAMP-dependent protein kinase A (CHO PKA) in complex with isonicotinamidine
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, DIMETHYL SULFOXIDE, ISONICOTINAMIDINE, ...
Authors:Oebbeke, M, Heine, A, Klebe, G.
Deposit date:2020-07-06
Release date:2020-12-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 60, 2021
3JWY
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BU of 3jwy by Molmil
Structure of endothelial nitric oxide synthase heme domain complexed with N1-{(3'R,4'S)-4'-[(6"-amino-4"-methylpyridin-2"-yl)methyl]pyrrolidin-3'-yl}-N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, CACODYLIC ACID, ...
Authors:Delker, S.L, Li, H, Poulos, T.L.
Deposit date:2009-09-18
Release date:2010-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Unexpected binding modes of nitric oxide synthase inhibitors effective in the prevention of a cerebral palsy phenotype in an animal model.
J.Am.Chem.Soc., 132, 2010
7QIS
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BU of 7qis by Molmil
CRYSTAL STRUCTURE OF THE P1 difluoroethylglycine (DfeGly) BPTI MUTANT- BOVINE CHYMOTRYPSIN COMPLEX
Descriptor: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ...
Authors:Dimos, N, Leppkes, J, Koksch, B, Wahl, M.C, Loll, B.
Deposit date:2021-12-15
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Fluorine-induced polarity increases inhibitory activity of BPTI towards chymotrypsin.
Rsc Chem Biol, 3, 2022
7TJ7
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BU of 7tj7 by Molmil
Cardiac thin filament decorated with C1 Ig-domain and regulatory M-domain of cardiac myosin binding protein C (cMyBP-C)
Descriptor: Myosin-binding protein C, cardiac-type, cardiac actin, ...
Authors:Risi, C.M, Galkin, V.E.
Deposit date:2022-01-14
Release date:2022-11-23
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Cryo-Electron Microscopy Reveals Cardiac Myosin Binding Protein-C M-Domain Interactions with the Thin Filament.
J.Mol.Biol., 434, 2022
7LU4
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BU of 7lu4 by Molmil
Crystal structure of bacterial glycyl tRNA synthetase in complex with glycine
Descriptor: GLYCINE, Multifunctional fusion protein
Authors:Torres-Larios, A.
Deposit date:2021-02-20
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of bacterial glycyl tRNA synthetase in complex with glycine
To Be Published
7QIT
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BU of 7qit by Molmil
CRYSTAL STRUCTURE OF THE P1 trifluoroethylglycine (TfeGly) BPTI MUTANT- BOVINE CHYMOTRYPSIN COMPLEX
Descriptor: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ...
Authors:Dimos, N, Leppkes, J, Koksch, B, Wahl, M.C, Loll, B.
Deposit date:2021-12-15
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Fluorine-induced polarity increases inhibitory activity of BPTI towards chymotrypsin.
Rsc Chem Biol, 3, 2022
2YG2
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BU of 2yg2 by Molmil
Structure of apolioprotein M in complex with Sphingosine 1-Phosphate
Descriptor: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, APOLIPOPROTEIN M, CITRATE ANION
Authors:Christoffersen, C, Obinata, H, Gowda, S, Galvani, S, Ahnstrom, J, Sevvana, M, Egerer-Sieber, C, Muller, Y.A, Hla, T, Nielsen, L, Dahlback, B.
Deposit date:2011-04-11
Release date:2011-06-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Endothelium-Protective Sphingosine-1-Phosphate Provided by Hdl-Associated Apolipoprotein M.
Proc.Natl.Acad.Sci.USA, 108, 2011
7TIJ
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BU of 7tij by Molmil
Cardiac F-actin decorated with regulatory M-domain of cardiac myosin binding protein C
Descriptor: Myosin-binding protein C, cardiac-type, cardiac actin
Authors:Risi, C.M, Galkin, V.E.
Deposit date:2022-01-13
Release date:2022-11-23
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Cryo-Electron Microscopy Reveals Cardiac Myosin Binding Protein-C M-Domain Interactions with the Thin Filament.
J.Mol.Biol., 434, 2022
2FUB
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BU of 2fub by Molmil
Crystal structure of urate oxidase at 140 MPa
Descriptor: 8-AZAXANTHINE, CYSTEINE, Uricase
Authors:Colloc'h, N, Girard, E, Fourme, R.
Deposit date:2006-01-26
Release date:2006-02-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High pressure macromolecular crystallography: The 140-MPa crystal structure at 2.3 A resolution of urate oxidase, a 135-kDa tetrameric assembly
Biochim.Biophys.Acta, 1764, 2006
8RBS
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BU of 8rbs by Molmil
Emiliania huxleyi virus 201 (EhV-201) asymmetrical unit of capsid proteins predicted by AlphaFold2 fitted into the cryo-EM density of EhV-201 virion composite map.
Descriptor: Major capsid protein, Penton protein
Authors:Homola, M, Buttner, C.R, Fuzik, T, Novacek, J, Chaillet, M, Forster, F, Plevka, P.
Deposit date:2023-12-04
Release date:2023-12-20
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (18 Å)
Cite:Structure and replication cycle of a virus infecting climate-modulating alga Emiliania huxleyi.
Sci Adv, 10, 2024
2YI9
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BU of 2yi9 by Molmil
Structure of the RNA polymerase VP1 from Infectious Pancreatic Necrosis Virus in complex with magnesium
Descriptor: CHLORIDE ION, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Graham, S.C, Sarin, L.P, Bahar, M.W, Myers, R.A, Stuart, D.I, Bamford, D.H, Grimes, J.M.
Deposit date:2011-05-11
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The N-Terminus of the RNA Polymerase from Infectious Pancreatic Necrosis Virus is the Determinant of Genome Attachment.
Plos Pathog., 7, 2011
2FUF
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BU of 2fuf by Molmil
Crystal structure of the SV40 large T antigen origin-binding domain
Descriptor: CITRATE ANION, Large T antigen
Authors:Meinke, G, Bullock, P.A, Bohm, A.
Deposit date:2006-01-26
Release date:2006-08-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of the simian virus 40 large T-antigen origin-binding domain.
J.Virol., 80, 2006
8RBT
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BU of 8rbt by Molmil
Emiliania huxleyi virus 201 (EhV-201) capsid proteins predicted by AlphaFold2 fitted into a cryo-EM density map of the EhV-201 virion capsid.
Descriptor: Major capsid protein, Penton protein
Authors:Homola, M, Buttner, C.R, Fuzik, T, Novacek, J, Chaillet, M, Forster, F, Plevka, P.
Deposit date:2023-12-04
Release date:2023-12-20
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Structure and replication cycle of a virus infecting climate-modulating alga Emiliania huxleyi.
Sci Adv, 10, 2024
3J1V
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BU of 3j1v by Molmil
A refined model of the prototypical Salmonella typhimurium T3SS basal body reveals the molecular basis for its assembly
Descriptor: Protein InvG
Authors:Sgourakis, N.G, Bergeron, J.R.C, Strynadka, N.J.C, Baker, D.
Deposit date:2012-07-08
Release date:2013-05-22
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (11.7 Å)
Cite:A Refined Model of the Prototypical Salmonella SPI-1 T3SS Basal Body Reveals the Molecular Basis for Its Assembly.
Plos Pathog., 9, 2013
2YKT
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BU of 2ykt by Molmil
Crystal structure of the I-BAR domain of IRSp53 (BAIAP2) in complex with an EHEC derived Tir peptide
Descriptor: BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2, SULFATE ION, TRANSLOCATED INTIMIN RECEPTOR PROTEIN
Authors:de Groot, J.C, Schlueter, K, Carius, Y, Quedenau, C, Vingadassalom, D, Faix, J, Weiss, S.M, Reichelt, J, Standfuss-Gabisch, C, Lesser, C.F, Leong, J.M, Heinz, D.W, Buessow, K, Stradal, T.E.B.
Deposit date:2011-05-30
Release date:2011-09-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural Basis for Complex Formation between Human Irsp53 and the Translocated Intimin Receptor Tir of Enterohemorrhagic E. Coli.
Structure, 19, 2011
7THQ
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BU of 7thq by Molmil
Crystal structure of PltF trapped with PigG using a proline adenosine vinylsulfonamide inhibitor
Descriptor: 5'-deoxy-5'-({(2S)-2-({2-[(N-{(2R)-4-[(dioxo-lambda~5~-phosphanyl)oxy]-2-hydroxy-3,3-dimethylbutanoyl}-beta-alanyl)amino]ethyl}sulfanyl)-2-[(2S)-pyrrolidin-2-yl]ethanesulfonyl}amino)adenosine, AZIDE ION, L-proline--[L-prolyl-carrier protein] ligase, ...
Authors:Corpuz, J.C, Podust, L.M.
Deposit date:2022-01-11
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Essential Role of Loop Dynamics in Type II NRPS Biomolecular Recognition.
Acs Chem.Biol., 17, 2022
6ZU3
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BU of 6zu3 by Molmil
Crystal structure of a cyclodipeptide synthase from Bacillus thermoamylovorans
Descriptor: Cyclodipeptide synthase, BtCDPS
Authors:Harding, C.J, Czekster, C.M.
Deposit date:2020-07-21
Release date:2021-01-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Bypassing the requirement for aminoacyl-tRNA by a cyclodipeptide synthase enzyme.
Rsc Chem Biol, 2, 2021
2NBZ
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BU of 2nbz by Molmil
Solution structure of the K domain of EMCV IRES
Descriptor: IRES RNA 40-MER
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
7U1M
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BU of 7u1m by Molmil
Crystal structure of NTMT1 in complex with compound YD206
Descriptor: (1R,3S,4R)-1-azabicyclo[2.2.2]octan-3-yl {2-[2-(4-fluorophenyl)-1,3-thiazol-4-yl]propan-2-yl}carbamate, N-terminal Xaa-Pro-Lys N-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Yadav, R, Noinaj, N.
Deposit date:2022-02-21
Release date:2022-12-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Venglustat Inhibits Protein N-Terminal Methyltransferase 1 in a Substrate-Competitive Manner.
J.Med.Chem., 65, 2022
5MCY
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BU of 5mcy by Molmil
The structure of the mature HIV-1 CA pentamer in intact virus particles
Descriptor: Capsid protein p24
Authors:Mattei, S, Glass, B, Hagen, W.J.H, Kraeusslich, H.-G, Briggs, J.A.G.
Deposit date:2016-11-10
Release date:2016-12-28
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:The structure and flexibility of conical HIV-1 capsids determined within intact virions.
Science, 354, 2016
7BZD
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BU of 7bzd by Molmil
Structure of Bacillus subtilis HxlR, wild type
Descriptor: HTH-type transcriptional activator HxlR
Authors:Zhu, R, Chen, P.R.
Deposit date:2020-04-27
Release date:2021-02-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.612 Å)
Cite:Genetically encoded formaldehyde sensors inspired by a protein intra-helical crosslinking reaction.
Nat Commun, 12, 2021

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