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8JO2	Structural basis of transcriptional activation by the OmpR/PhoB-family response regulator PmrA Descriptor: DNA (65-MER), DNA-binding transcriptional regulator BasR, DNA-directed RNA polymerase subunit alpha, ... Authors: Lou, Y.-C, Huang, H.-Y, Chen, C, Wu, K.-P. Deposit date: 2023-06-06 Release date: 2023-08-30 Last modified: 2023-10-25 Method: ELECTRON MICROSCOPY (2.74 Å) Cite: Structural basis of transcriptional activation by the OmpR/PhoB-family response regulator PmrA. Nucleic Acids Res., 51, 2023
8TO6	Escherichia coli RNA polymerase unwinding intermediate (I1d) at the lambda PR promoter Descriptor: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Darst, S.A, Saecker, R.M, Mueller, A.U. Deposit date: 2023-08-02 Release date: 2024-07-03 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy. Nat.Struct.Mol.Biol., 2024
8TO1	Escherichia coli RNA polymerase unwinding intermediate (I1a) at the lambda PR promoter Descriptor: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Darst, S.A, Saecker, R.M, Mueller, A.U. Deposit date: 2023-08-02 Release date: 2024-07-03 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy. Nat.Struct.Mol.Biol., 2024
8TOE	Escherichia coli RNA polymerase unwinding intermediate (I1c) at the lambda PR promoter Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Darst, S.A, Saecker, R.M, Mueller, A.U. Deposit date: 2023-08-03 Release date: 2024-07-03 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy. Nat.Struct.Mol.Biol., 2024
8TOM	Escherichia coli RNA polymerase closed complex intermediate at the lambda PR promoter Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Darst, S.A, Saecker, R.M, Mueller, A.U. Deposit date: 2023-08-03 Release date: 2024-07-03 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy. Nat.Struct.Mol.Biol., 2024
8TO8	Escherichia coli RNA polymerase unwinding intermediate (I1b) at the lambda PR promoter Descriptor: (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Darst, S.A, Saecker, R.M, Mueller, A.U. Deposit date: 2023-08-03 Release date: 2024-07-03 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy. Nat.Struct.Mol.Biol., 2024
8W8N	Thermus thermophilus initiation transcription complex in the pre-translocated state Descriptor: DNA (21-MER), DNA (27-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Li, L, Zhang, Y. Deposit date: 2023-09-04 Release date: 2024-07-24 Method: X-RAY DIFFRACTION (2.693 Å) Cite: Nanopore tweezers show fractional-nucleotide translocation in sequence-dependent pausing by RNA polymerase. Proc.Natl.Acad.Sci.USA, 121, 2024
8W8P	Thermus thermophilus initiation transcription complex containing CMPcPP in the post-translocated state Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (21-MER), DNA (27-MER), ... Authors: Li, L, Zhang, Y. Deposit date: 2023-09-04 Release date: 2024-07-24 Method: X-RAY DIFFRACTION (3.165 Å) Cite: Nanopore tweezers show fractional-nucleotide translocation in sequence-dependent pausing by RNA polymerase. Proc.Natl.Acad.Sci.USA, 121, 2024
8W8O	Thermus thermophilus initiation complex in the half-translocated state Descriptor: DNA (21-MER), DNA (27-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Li, L, Zhang, Y. Deposit date: 2023-09-04 Release date: 2024-07-24 Method: X-RAY DIFFRACTION (2.512 Å) Cite: Nanopore tweezers show fractional-nucleotide translocation in sequence-dependent pausing by RNA polymerase. Proc.Natl.Acad.Sci.USA, 121, 2024
8U3B	Cryo-EM structure of E. coli NarL-transcription activation complex at 3.2A Descriptor: DNA (69-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Liu, B, Kompaniiets, D, Wang, D. Deposit date: 2023-09-07 Release date: 2024-01-17 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (3.23 Å) Cite: Structural basis for transcription activation by the nitrate-responsive regulator NarL. Nucleic Acids Res., 52, 2024
8X6F	Cryo-EM structure of Staphylococcus aureus sigA-dependent RNAP-promoter open complex Descriptor: DNA (71-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Yuan, L, Xu, L, Liu, Q, Feng, Y. Deposit date: 2023-11-21 Release date: 2024-06-05 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Structural basis of promoter recognition by Staphylococcus aureus RNA polymerase. Nat Commun, 15, 2024
8Y6U	Cryo-EM structure of E.coli transcription initiation complex with transcription factor GcvA Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Lin, W, Shi, J. Deposit date: 2024-02-03 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (3.97 Å) Cite: NMR analysis of a loop-bulge structure of UUCGA pentaloop. Biochem.Biophys.Res.Commun., 691, 2024

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