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6AJW
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BU of 6ajw by Molmil
Crystal structure of BRD4 in complex with DMSO (Cocktail No. 4)
Descriptor: Bromodomain-containing protein 4, DIMETHYL SULFOXIDE, SODIUM ION
Authors:Yokoyama, T, Matsumoto, K, Nabeshima, Y, Mizuguchi, M.
Deposit date:2018-08-28
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Structural and thermodynamic characterization of the binding of isoliquiritigenin to the first bromodomain of BRD4.
Febs J., 286, 2019
5W2W
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BU of 5w2w by Molmil
INFLUENZA VIRUS NEURAMINIDASE N9 IN COMPLEX WITH 8-DEOXYGENATED 2,3-DIFLUORO-N-ACETYLNEURAMINIC ACID
Descriptor: (2R,3R,4R,5R,6R)-5-acetamido-6-[(1R)-1,3-bis(oxidanyl)propyl]-2,3-bis(fluoranyl)-4-oxidanyl-oxane-2-carboxylic acid, (2~{R},3~{R},4~{R},5~{R})-3-acetamido-2-[(1~{R})-1,3-bis(oxidanyl)propyl]-5-fluoranyl-4-oxidanyl-2,3,4,5-tetrahydropyran-1-ium-6-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Streltsov, V.A, Mckimm-Breschkin, J, Barrett, S, Pilling, P, Hader, S, Watt, A.G.
Deposit date:2017-06-07
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Functional Analysis of Anti-Influenza Activity of 4-, 7-, 8- and 9-Deoxygenated 2,3-Difluoro- N-acetylneuraminic Acid Derivatives.
J. Med. Chem., 61, 2018
7NPW
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BU of 7npw by Molmil
Cryo-EM structure of Human excitatory amino acid transporters-1 (EAAT1) in potassium buffer
Descriptor: Excitatory amino acid transporter 1
Authors:Kumar, A, Reyes, N.
Deposit date:2021-02-28
Release date:2021-10-13
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.99 Å)
Cite:The ion-coupling mechanism of human excitatory amino acid transporters.
Embo J., 41, 2022
5FJ1
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BU of 5fj1 by Molmil
Structure of the standard kink turn HmKt-7 as stem loop in P212121 space group
Descriptor: HMKT-7, MAGNESIUM ION, SODIUM ION
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2015-10-05
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
5FKE
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BU of 5fke by Molmil
SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is GU
Descriptor: BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2015-10-15
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
6SL8
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BU of 6sl8 by Molmil
Diaminobutyrate acetyltransferase EctA from Paenibacillus lautus in complex with its substrate L-2,4-diaminobutyric acid (DAB)
Descriptor: 2,4-DIAMINOBUTYRIC ACID, GLYCEROL, L-2,4-diaminobutyric acid acetyltransferase, ...
Authors:Richter, A.A, Kobus, S, Czech, L, Hoeppner, A, Bremer, E, Smits, S.H.J.
Deposit date:2019-08-19
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine.
J.Biol.Chem., 295, 2020
6AWR
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BU of 6awr by Molmil
Structure of PR 10 Allergen Ara h 8.01 in complex with ANS
Descriptor: 8-ANILINO-1-NAPHTHALENE SULFONATE, Ara h 8 allergen, SODIUM ION, ...
Authors:Offermann, L.R, McBride, J, Hurlburt, B.K, Maleki, S.J, Pote, S.S, Perdue, M, Chruszcz, M.
Deposit date:2017-09-06
Release date:2018-09-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of PR-10 Allergen Ara h 8.01.
To Be Published
5G0C
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BU of 5g0c by Molmil
An unusual natural product primary sulfonamide: synthesis, carbonic anhydrase inhibition and protein x-ray structure of Psammaplin C
Descriptor: CARBONIC ANHYDRASE 2, ETHANOL, SODIUM ION, ...
Authors:Mujumdar, P, Supuran, C.T, Peat, T.S, Poulsen, S.A.
Deposit date:2016-03-17
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structures of Psammaplin C.
J.Med.Chem., 59, 2016
4I2R
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BU of 4i2r by Molmil
2.15 Angstroms X-ray crystal structure of NAD- and alternative substrate-bound 2-aminomuconate 6-semialdehyde dehydrogenase from Pseudomonas fluorescens
Descriptor: (2E,4E)-2-hydroxy-6-oxohexa-2,4-dienoic acid, 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Huo, L, Davis, I, Chen, L, Liu, A.
Deposit date:2012-11-22
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action.
Nat Commun, 6, 2015
5FOK
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BU of 5fok by Molmil
Crystal structure of the siderophore receptor PiuA from Pseudomonas aeruginosa
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, IRON TRANSPORT OUTER MEMBRANE RECEPTOR, SODIUM ION, ...
Authors:Moynie, L, Naismith, J.H.
Deposit date:2015-11-23
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Function of the PiuA and PirA Siderophore-Drug Receptors from Pseudomonas aeruginosa and Acinetobacter baumannii.
Antimicrob. Agents Chemother., 61, 2017
4I25
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BU of 4i25 by Molmil
2.00 Angstroms X-ray crystal structure of NAD- and substrate-bound 2-aminomuconate 6-semialdehyde dehydrogenase from Pseudomonas fluorescens
Descriptor: (2E,4E)-2-amino-6-oxohexa-2,4-dienoic acid, 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Huo, L, Davis, I, Chen, L, Liu, A.
Deposit date:2012-11-21
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action.
Nat Commun, 6, 2015
5WJO
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BU of 5wjo by Molmil
Crystal structure of the unliganded PG90 TCR
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PG90 TCR alpha chain, ...
Authors:Shahine, A, Gras, S, Rossjohn, J.
Deposit date:2017-07-24
Release date:2017-10-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A molecular basis of human T cell receptor autoreactivity toward self-phospholipids.
Sci Immunol, 2, 2017
5WN4
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BU of 5wn4 by Molmil
APE1 exonuclease substrate complex with a C/T mismatch
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Freudenthal, B.D, Whitaker, A.M.
Deposit date:2017-07-31
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular snapshots of APE1 proofreading mismatches and removing DNA damage.
Nat Commun, 9, 2018
5FKH
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BU of 5fkh by Molmil
SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is CU
Descriptor: BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2015-10-15
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function.
Nucleic Acids Res., 44, 2016
3DIO
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BU of 3dio by Molmil
Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, IRIDIUM HEXAMINE SOAK
Descriptor: IRIDIUM HEXAMMINE ION, LYSINE, PENTAETHYLENE GLYCOL, ...
Authors:Serganov, A.A.
Deposit date:2008-06-20
Release date:2008-09-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into amino acid binding and gene control by a lysine riboswitch.
Nature, 455, 2008
6BEM
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BU of 6bem by Molmil
Ternary complex crystal structure of DNA polymerase Beta with S-isomer of beta-gamma-CHCL-dCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, 5'-O-[(R)-{[(R)-[(S)-chloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-2'-deoxycytidine, CHLORIDE ION, ...
Authors:Batra, V.K, Wilson, S.H.
Deposit date:2017-10-25
Release date:2018-10-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Mapping Functional Substrate-Enzyme Interactions in the pol beta Active Site through Chemical Biology: Structural Responses to Acidity Modification of Incoming dNTPs.
Biochemistry, 57, 2018
6AWT
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BU of 6awt by Molmil
Structure of PR 10 Allergen in complex with epicatechin
Descriptor: (2R,3R)-2-(3,4-dihydroxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol, BENZOIC ACID, PR 10 protein, ...
Authors:Offermann, L.R, Perdue, M, McBride, J, Hurlburt, B.K, Maleki, S.J, Pote, S.S, Chruszcz, M.
Deposit date:2017-09-06
Release date:2018-09-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of PR-10 Allergen Ara h 8.01.
To Be Published
6SXC
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BU of 6sxc by Molmil
Crystal structure of the Voltage-Gated Sodium Channel NavMs (F208L) in complex with 4-hydroxytamoxifen (2.5 Angstrom resolution)
Descriptor: 4-HYDROXYTAMOXIFEN, DODECAETHYLENE GLYCOL, HEGA-10, ...
Authors:Sula, A, Hollingworth, D, Wallace, B.A.
Deposit date:2019-09-25
Release date:2021-02-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A tamoxifen receptor within a voltage-gated sodium channel.
Mol.Cell, 81, 2021
6B2Y
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BU of 6b2y by Molmil
Apo YiuA Crystal Form 2
Descriptor: SODIUM ION, Solute-binding periplasmic protein of iron/siderophore ABC transporter
Authors:Radka, C.D, DeLucas, L.J, Aller, S.G.
Deposit date:2017-09-20
Release date:2017-11-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:The crystal structure of the Yersinia pestis iron chaperone YiuA reveals a basic triad binding motif for the chelated metal.
Acta Crystallogr D Struct Biol, 73, 2017
5FAY
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BU of 5fay by Molmil
Y208F mutant of choline TMA-lyase
Descriptor: CHOLINE ION, Choline trimethylamine-lyase, MALONATE ION, ...
Authors:Funk, M.A, Drennan, C.L.
Deposit date:2015-12-12
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase.
Cell Chem Biol, 23, 2016
5WLG
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BU of 5wlg by Molmil
Crystal Structure of H-2Db with the GAP501 peptide (SQL)
Descriptor: Beta-2-microglobulin, CHLORIDE ION, GAP50 peptide, ...
Authors:Gras, S, Farenc, C, Josephs, T, Rossjohn, J.
Deposit date:2017-07-26
Release date:2017-11-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A T Cell Receptor Locus Harbors a Malaria-Specific Immune Response Gene.
Immunity, 47, 2017
4FZZ
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BU of 4fzz by Molmil
Exonuclease X in complex with 5' overhanging duplex DNA
Descriptor: DNA (5'-D(*GP*TP*CP*AP*TP*TP*GP*TP*GP*GP*AP*TP*CP*CP*GP*AP*G)-3'), Exodeoxyribonuclease 10, SODIUM ION
Authors:Wang, T, Sun, H, Cheng, F, Bi, L, Jiang, T.
Deposit date:2012-07-08
Release date:2013-07-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Recognition and processing of double-stranded DNA by ExoX, a distributive 3'-5' exonuclease
Nucleic Acids Res., 41, 2013
5EFO
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BU of 5efo by Molmil
X-ray structure uridine phosphorylase from Vibrio cholerae in complex with cytidine and cytosine at 1.63A.
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, ...
Authors:Prokofev, I.I, Lashkov, A.A, Gabdoulkhakov, A.G, Betzel, C, Mikhailov, A.M.
Deposit date:2015-10-24
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:X-ray structure uridine phosphorylase from Vibrio cholerae in complex with uridine at 2.24 A resolution
To Be Published
4GFI
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BU of 4gfi by Molmil
Crystal structure of EFI-502318, an enolase family member from Agrobacterium tumefaciens with homology to dipeptide epimerases (bound sodium, L-Ala-L-Glu with ordered loop)
Descriptor: ALANINE, CHLORIDE ION, GLUTAMIC ACID, ...
Authors:Vetting, M.W, Bouvier, J.T, Morisco, L.L, Wasserman, S.R, Sojitra, S, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-08-03
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of EFI-502318, an enolase family member from Agrobacterium tumefaciens with homology to dipeptide epimerases (bound sodium, l-ala-l-glu with ordered loop)
To be Published
4G8T
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BU of 4g8t by Molmil
Crystal structure of a glucarate dehydratase related protein, from actinobacillus succinogenes, target EFI-502312, with sodium and sulfate bound, ordered loop
Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, ...
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-07-23
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a glucarate dehydratase related protein, from actinobacillus succinogenes, target efi-502312, with sodium and sulfate bound, ordered loop
TO BE PUBLISHED

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