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PDB: 116 results

8OZ8
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BU of 8oz8 by Molmil
Crystal Structure of an Hydroxynitrile lyase variant (H96A) from Granulicella tundricola
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 3-CARBOXY-N,N,N-TRIMETHYLPROPAN-1-AMINIUM, BROMIDE ION, ...
Authors:Bento, I, Coloma, J, Hagedoorn, P.-L, Hanefeld, U.
Deposit date:2023-05-08
Release date:2024-04-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Can a Hydroxynitrile Lyase Catalyze an Oxidative Cleavage?
Acs Catalysis, 13, 2023
4BIF
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BU of 4bif by Molmil
Biochemical and structural characterisation of a novel manganese- dependent hydroxynitrile lyase from bacteria
Descriptor: CUPIN 2 CONSERVED BARREL DOMAIN PROTEIN, MANGANESE (II) ION
Authors:Hajnal, I, Lyskowski, A, Hanefeld, U, Gruber, K, Schwab, H, Steiner, K.
Deposit date:2013-04-10
Release date:2013-09-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Biochemical and Structural Characterisation of a Novel Bacterial Manganese-Dependent Hydroxynitrile Lyase.
FEBS J., 280, 2013
4UXA
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BU of 4uxa by Molmil
Improved variant of (R)-selective manganese-dependent hydroxynitrile lyase from bacteria
Descriptor: CUPIN 2 CONSERVED BARREL DOMAIN PROTEIN, MANGANESE (II) ION
Authors:Pavkov-Keller, T, Wiedner, R, Kothbauer, B, Gruber-Khadjawi, M, Schwab, H, Steiner, K, Gruber, K.
Deposit date:2014-08-21
Release date:2015-01-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Improving the Properties of Bacterial R-Selective Hydroxynitrile Lyases for Industrial Applications
Chemcatchem, 2015
4MV2
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BU of 4mv2 by Molmil
Crystal structure of plu4264 protein from Photorhabdus luminescens
Descriptor: NICKEL (II) ION, SODIUM ION, plu4264
Authors:Michalska, K, Li, H, Jedrzejczak, R, Babnigg, G, Bingman, C.A, Yennamalli, R, Weerth, S, Thomas, M.G, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2013-09-23
Release date:2013-10-02
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (1.349 Å)
Cite:Structure of a cupin protein Plu4264 from Photorhabdus luminescens subsp. laumondii TTO1 at 1.35 angstrom resolution.
Proteins, 83, 2015
6A53
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BU of 6a53 by Molmil
Crystal structure of DddK
Descriptor: MANGANESE (II) ION, Novel protein with potential Cupin domain
Authors:Zhang, Y.Z, Li, C.Y.
Deposit date:2018-06-21
Release date:2019-02-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Function Analysis Indicates that an Active-Site Water Molecule Participates in Dimethylsulfoniopropionate Cleavage by DddK.
Appl. Environ. Microbiol., 85, 2019
8ZYG
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BU of 8zyg by Molmil
Crystal structure of a cupin protein (tm1459, I49C-4py/H52A/C106D mutant) in copper (Cu) substituted form
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, Cupin type-2 domain-containing protein, ...
Authors:Morita, Y, Kubo, H, Matsumoto, R, Fujieda, N.
Deposit date:2024-06-17
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Copper center in artificial non-heme metalloenzyme
To Be Published
8CH4
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BU of 8ch4 by Molmil
Crystal structure of the ring cleaving dioxygenase 5-nitrosalicylate 1,2-dioxygenase from Bradyrhizobium sp.
Descriptor: 5-nitrosalicylic acid 1,2-dioxygenase, FE (III) ION
Authors:Ferraroni, M, Stolz, A, Eppinger, E.
Deposit date:2023-02-07
Release date:2023-07-05
Last modified:2023-07-12
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the monocupin ring-cleaving dioxygenase 5-nitrosalicylate 1,2-dioxygenase from Bradyrhizobium sp.
Acta Crystallogr D Struct Biol, 79, 2023
8ZYH
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BU of 8zyh by Molmil
Crystal structure of a cupin protein (tm1459, I49C-4py/H52A/H54A/C106D mutant) in copper (Cu) substituted form
Descriptor: COPPER (II) ION, Cupin type-2 domain-containing protein, HEXAETHYLENE GLYCOL
Authors:Morita, Y, Kubo, H, Matsumoto, R, Fujieda, N.
Deposit date:2024-06-17
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Copper center in artificial non-heme metalloenzyme
To Be Published
7ZVM
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BU of 7zvm by Molmil
Thermococcus barophilus phosphomannose isomerase protein structure at 1.6 A
Descriptor: MAGNESIUM ION, Mannose-6-phosphate isomerase
Authors:Hoh, F, Calio, A.
Deposit date:2022-05-16
Release date:2022-08-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Unravelling the Adaptation Mechanisms to High Pressure in Proteins.
Int J Mol Sci, 23, 2022
7ZVY
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BU of 7zvy by Molmil
Thermococcus kadokarensis phosphomannose isomerase
Descriptor: Cupin_2 domain-containing protein, ZINC ION
Authors:Hoh, f, Calio, A.
Deposit date:2022-05-17
Release date:2022-08-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Unravelling the Adaptation Mechanisms to High Pressure in Proteins.
Int J Mol Sci, 23, 2022
6A54
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BU of 6a54 by Molmil
Crystal structure of DddK mutant Y64A
Descriptor: MANGANESE (II) ION, Novel protein with potential Cupin domain
Authors:Zhang, Y.Z, Li, C.Y.
Deposit date:2018-06-21
Release date:2019-02-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Function Analysis Indicates that an Active-Site Water Molecule Participates in Dimethylsulfoniopropionate Cleavage by DddK.
Appl. Environ. Microbiol., 85, 2019
6A55
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BU of 6a55 by Molmil
Crystal structure of DddK mutant Y122A
Descriptor: 3-(dimethyl-lambda~4~-sulfanyl)propanoic acid, MANGANESE (II) ION, Novel protein with potential Cupin domain
Authors:Zhang, Y.Z, Li, C.Y.
Deposit date:2018-06-21
Release date:2019-02-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Function Analysis Indicates that an Active-Site Water Molecule Participates in Dimethylsulfoniopropionate Cleavage by DddK.
Appl. Environ. Microbiol., 85, 2019
1O4T
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BU of 1o4t by Molmil
Crystal structure of a predicted oxalate decarboxylase (tm1287) from thermotoga maritima at 1.95 A resolution
Descriptor: MANGANESE (II) ION, OXALATE ION, putative oxalate decarboxylase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2003-07-03
Release date:2003-07-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of a putative oxalate decarboxylase (TM1287) from Thermotoga maritima at 1.95 A resolution
Proteins, 56, 2004
4Q29
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BU of 4q29 by Molmil
Ensemble Refinement of plu4264 protein from Photorhabdus luminescens
Descriptor: NICKEL (II) ION, SODIUM ION, plu4264 protein
Authors:Wang, F, Michalska, K, Li, H, Jedrzejczak, R, Babnigg, G, Bingman, C.A, Yennamalli, R, Weerth, S, Miller, M.D, Thomas, M.G, Joachimiak, A, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro), Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-04-07
Release date:2014-05-07
Last modified:2015-02-11
Method:X-RAY DIFFRACTION (1.349 Å)
Cite:Structure of a cupin protein Plu4264 from Photorhabdus luminescens subsp. laumondii TTO1 at 1.35 angstrom resolution.
Proteins, 83, 2015
6B8W
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BU of 6b8w by Molmil
1.9 Angstrom Resolution Crystal Structure of Cupin_2 Domain (pfam 07883) of XRE Family Transcriptional Regulator from Enterobacter cloacae.
Descriptor: MANGANESE (II) ION, THIOCYANATE ION, XRE family transcriptional regulator
Authors:Minasov, G, Wawrzak, Z, Skarina, T, McChesney, C, Grimshaw, S, Sandoval, J, Satchell, K.J.F, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-10-09
Release date:2017-10-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:1.9 Angstrom Resolution Crystal Structure of Cupin_2 Domain (pfam 07883) of XRE Family Transcriptional Regulator from Enterobacter cloacae.
To Be Published
2H0V
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BU of 2h0v by Molmil
Crystal structure of a putative quercetin 2,3-dioxygenase (yxag, bsu39980) from bacillus subtilis at 2.60 A resolution
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-05-15
Release date:2006-05-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of (2636545) from Bacillus subtilis at 2.60 A resolution
To be published
4RD7
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BU of 4rd7 by Molmil
The crystal structure of a Cupin 2 conserved barrel domain protein from Salinispora arenicola CNS-205
Descriptor: Cupin 2 conserved barrel domain protein, GLYCEROL, SULFATE ION
Authors:Tan, K, Gu, M, Clancy, S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-09-18
Release date:2014-10-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.571 Å)
Cite:The crystal structure of a Cupin 2 conserved barrel domain protein from Salinispora arenicola CNS-205
To be Published
2I45
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BU of 2i45 by Molmil
Crystal structure of protein NMB1881 from Neisseria meningitidis
Descriptor: Hypothetical protein
Authors:Chang, C, Hatzos, C, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-08-21
Release date:2006-09-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of protein NMB1881 from Neisseria meningitidis
To be Published
1SQ4
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BU of 1sq4 by Molmil
Crystal Structure of the Putative Glyoxylate Induced Protein from Pseudomonas aeruginosa, Northeast Structural Genomics Target PaR14
Descriptor: Glyoxylate-induced Protein, THIOCYANATE ION
Authors:Forouhar, F, Chen, Y, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2004-03-17
Release date:2004-04-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of the Putative Glyoxylate Induced Protein from Pseudomonas aeruginosa, Northeast Structural Genomics Target PaR14
To be Published
6L2F
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BU of 6l2f by Molmil
Crystal structure of a cupin protein (tm1459, H54AH58A mutant) in copper (Cu) substituted form
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, COPPER (II) ION, ...
Authors:Fujieda, N, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-10-03
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes.
Angew.Chem.Int.Ed.Engl., 59, 2020
5J4F
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BU of 5j4f by Molmil
Crystal structure of the N-terminally His6-tagged HP0902, an uncharacterized protein from Helicobacter pylori 26695
Descriptor: Uncharacterized protein
Authors:Sim, D.-W, Lee, W.-C, Kim, H.Y, Kim, J.-H, Won, H.-S.
Deposit date:2016-04-01
Release date:2017-02-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural identification of the lipopolysaccharide-binding capability of a cupin-family protein from Helicobacter pylori
FEBS Lett., 590, 2016
6L2D
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BU of 6l2d by Molmil
Crystal structure of a cupin protein (tm1459) in copper (Cu) substituted form
Descriptor: COPPER (II) ION, Cupin_2 domain-containing protein
Authors:Fujieda, N, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-10-03
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.198 Å)
Cite:Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes.
Angew.Chem.Int.Ed.Engl., 59, 2020
6L2E
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BU of 6l2e by Molmil
Crystal structure of a cupin protein (tm1459, H52A mutant) in copper (Cu) substituted form
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, Cupin_2 domain-containing protein
Authors:Fujieda, N, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
Deposit date:2019-10-03
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.201 Å)
Cite:Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes.
Angew.Chem.Int.Ed.Engl., 59, 2020
5J4G
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BU of 5j4g by Molmil
Crystal structure of the C-terminally His6-tagged HP0902, an uncharacterized protein from Helicobacter pylori 26695
Descriptor: Uncharacterized protein
Authors:Sim, D.W, Lee, W.C, Kim, H.Y, Kim, J.H, Won, H.S.
Deposit date:2016-04-01
Release date:2017-02-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural identification of the lipopolysaccharide-binding capability of a cupin-family protein from Helicobacter pylori
FEBS Lett., 590, 2016
5J7M
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BU of 5j7m by Molmil
Crystal structure of Cupin 2 conserved barrel domain protein from Kribbella flavida DSM 17836
Descriptor: ACETATE ION, Cupin 2 conserved barrel domain protein, DI(HYDROXYETHYL)ETHER, ...
Authors:Chang, C, Cuff, M, Chhor, G, Endres, M, Joachimiak, A.
Deposit date:2016-04-06
Release date:2016-04-27
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of Cupin 2 conserved barrel domain protein from Kribbella flavida DSM 17836
To Be Published

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