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PDB: 211 results

8IWW
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BU of 8iww by Molmil
hSPCA1 in the CaE1P-ADP state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Calcium-transporting ATPase type 2C member 1, ...
Authors:Liu, Z.M, Wu, M.Q, Wu, C.
Deposit date:2023-03-31
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Structure and transport mechanism of the human calcium pump SPCA1.
Cell Res., 33, 2023
8IWS
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BU of 8iws by Molmil
hSPCA1 in the CaE2P state
Descriptor: BERYLLIUM TRIFLUORIDE ION, CALCIUM ION, Calcium-transporting ATPase type 2C member 1, ...
Authors:Liu, Z.M, Wu, M.Q, Wu, C.
Deposit date:2023-03-31
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Structure and transport mechanism of the human calcium pump SPCA1.
Cell Res., 33, 2023
8IWR
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BU of 8iwr by Molmil
hSPCA1 in the CaE1-ATP state
Descriptor: CALCIUM ION, Calcium-transporting ATPase type 2C member 1, MAGNESIUM ION, ...
Authors:Liu, Z.M, Wu, M.Q, Wu, C.
Deposit date:2023-03-31
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structure and transport mechanism of the human calcium pump SPCA1.
Cell Res., 33, 2023
8IWP
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BU of 8iwp by Molmil
hSPCA1 in the CaE1 state
Descriptor: CALCIUM ION, Calcium-transporting ATPase type 2C member 1
Authors:Liu, Z.M, Wu, M.Q, Wu, C.
Deposit date:2023-03-30
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Structure and transport mechanism of the human calcium pump SPCA1.
Cell Res., 33, 2023
7EFL
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BU of 7efl by Molmil
Crystal structure of the gastric proton pump K791S in (BYK)E2BeF state
Descriptor: (7R,8R,9S)-2,3-dimethyl-9-phenyl-7,8,9,10-tetrahydroimidazo[1,2-h][1,7]naphthyridine-7,8-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, ...
Authors:Abe, K, Yamamoto, K, Irie, K.
Deposit date:2021-03-22
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Gastric proton pump with two occluded K + engineered with sodium pump-mimetic mutations.
Nat Commun, 12, 2021
7EFM
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BU of 7efm by Molmil
Crystal structure of the gastric proton pump K791S/E820D/Y340N in (BYK)E2BeF state
Descriptor: (7R,8R,9S)-2,3-dimethyl-9-phenyl-7,8,9,10-tetrahydroimidazo[1,2-h][1,7]naphthyridine-7,8-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, ...
Authors:Abe, K, Yamamoto, K, Irie, K.
Deposit date:2021-03-22
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Gastric proton pump with two occluded K + engineered with sodium pump-mimetic mutations.
Nat Commun, 12, 2021
7EFN
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BU of 7efn by Molmil
Crystal structure of the gastric proton pump K791S/E820D/Y340N/E936V in (BYK)E2BeF state
Descriptor: (7R,8R,9S)-2,3-dimethyl-9-phenyl-7,8,9,10-tetrahydroimidazo[1,2-h][1,7]naphthyridine-7,8-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, ...
Authors:Abe, K, Yamamoto, K, Irie, K.
Deposit date:2021-03-22
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Gastric proton pump with two occluded K + engineered with sodium pump-mimetic mutations.
Nat Commun, 12, 2021
7E7S
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BU of 7e7s by Molmil
WT transporter state1
Descriptor: CALCIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2
Authors:Zhang, Y, Watanabe, S, Tsutsumi, A, Inaba, K.
Deposit date:2021-02-27
Release date:2021-09-08
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM analysis provides new mechanistic insight into ATP binding to Ca 2+ -ATPase SERCA2b.
Embo J., 40, 2021
7D94
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BU of 7d94 by Molmil
Crystal Structure of the Na+,K+-ATPase in the E2P state with bound one Mg2+ and one Rb+ in the presence of bufalin
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kanai, R, Cornelius, F, Ogawa, H, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-12
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
7DDF
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BU of 7ddf by Molmil
Crystal structures of Na+,K+-ATPase in complex with beryllium fluoride
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ogawa, H, Cornelius, F, Kanai, R, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-29
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (4.62 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
7E20
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BU of 7e20 by Molmil
Cryo EM structure of a K+-bound Na+,K+-ATPase in the E2 state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guo, Y.Y, Zhang, Y.Y, Yan, R.H, Huang, B.D, Ye, F.F, Wu, L.S, Chi, X.M, Zhou, Q.
Deposit date:2021-02-04
Release date:2022-06-15
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures of recombinant human sodium-potassium pump determined in three different states.
Nat Commun, 13, 2022
7E21
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BU of 7e21 by Molmil
Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state with ATP-gamma-S
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guo, Y.Y, Zhang, Y.Y, Yan, R.H, Huang, B.D, Ye, F.F, Wu, L.S, Chi, X.M, Zhou, Q.
Deposit date:2021-02-04
Release date:2022-06-15
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of recombinant human sodium-potassium pump determined in three different states.
Nat Commun, 13, 2022
7E1Z
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BU of 7e1z by Molmil
Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guo, Y.Y, Zhang, Y.Y, Yan, R.H, Huang, B.D, Ye, F.F, Wu, L.S, Chi, X.M, Zhou, Q.
Deposit date:2021-02-04
Release date:2022-06-15
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures of recombinant human sodium-potassium pump determined in three different states.
Nat Commun, 13, 2022
7DDK
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BU of 7ddk by Molmil
Crystal structures of Na+,K+-ATPase in complex with rostafuroxin
Descriptor: (3S,5R,8R,9S,10S,13S,14S,17S)-17-(furan-3-yl)-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,15,16-dodecahydro-1H-cyclopenta[a]phenanthrene-3,14,17-triol, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ogawa, H, Cornelius, F, Kanai, R, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-29
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
7ET1
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BU of 7et1 by Molmil
Cryo-EM structure of the gastric proton pump K791S/E820D/Y340N/E936V/Y799W mutant in K+-occluded (K+)E2-AlF state
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Abe, K.
Deposit date:2021-05-12
Release date:2021-09-01
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Gastric proton pump with two occluded K + engineered with sodium pump-mimetic mutations.
Nat Commun, 12, 2021
7D91
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BU of 7d91 by Molmil
Crystal Structure of the Na+,K+-ATPase in the E2P state with bound Mg2+ (P4(3)2(1)2 symmetry)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kanai, R, Cornelius, F, Ogawa, H, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-12
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
7DDH
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BU of 7ddh by Molmil
Crystal structures of Na+,K+-ATPase in complex with digoxin
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ogawa, H, Cornelius, F, Kanai, R, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-29
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.46 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
7DDL
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BU of 7ddl by Molmil
Crystal structures of Na+,K+-ATPase in complex with bufalin
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ogawa, H, Cornelius, F, Kanai, R, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-29
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
7D92
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BU of 7d92 by Molmil
Crystal Structure of the Na+,K+-ATPase in the E2P state with bound Mg2+ and anthroylouabain (P4(3)2(1)2 symmetry)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kanai, R, Cornelius, F, Ogawa, H, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-12
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
7D93
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BU of 7d93 by Molmil
Crystal Structure of the Na+,K+-ATPase in the E2P state with bound Mg2+ and anthroylouabain (P2(1)2(1)2(1) symmetry)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kanai, R, Cornelius, F, Ogawa, H, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-12
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
7DDI
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BU of 7ddi by Molmil
Crystal structures of Na+,K+-ATPase in complex with digitoxin
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ogawa, H, Cornelius, F, Kanai, R, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-29
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.72 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
2YN9
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BU of 2yn9 by Molmil
Cryo-EM structure of gastric H+,K+-ATPase with bound rubidium
Descriptor: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
Authors:Abe, K, Tani, K, Friedrich, T, Fujiyoshi, Y.
Deposit date:2012-10-13
Release date:2012-11-07
Last modified:2014-07-16
Method:ELECTRON CRYSTALLOGRAPHY (8 Å)
Cite:Cryo-Em Structure of Gastric H+,K+-ATPase with a Single Occupied Cation-Binding Site.
Proc.Natl.Acad.Sci.USA, 109, 2012
2YFY
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BU of 2yfy by Molmil
SERCA in the HnE2 State Complexed With Debutanoyl Thapsigargin
Descriptor: DEBUTANOYL THAPSIGARGIN, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Sonntag, Y, Musgaard, M, Olesen, C, Schiott, B, Moller, J.V, Nissen, P, Thogersen, L.
Deposit date:2011-04-11
Release date:2011-06-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mutual Adaptation of a Membrane Protein and its Lipid Bilayer During Conformational Changes.
Nat.Commun., 2, 2011
2ZBG
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BU of 2zbg by Molmil
Calcium pump crystal structure with bound AlF4 and TG in the absence of calcium
Descriptor: MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
Authors:Toyoshima, C, Ogawa, H, Norimatsu, Y.
Deposit date:2007-10-20
Release date:2007-12-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:How processing of aspartylphosphate is coupled to lumenal gating of the ion pathway in the calcium pump
Proc.Natl.Acad.Sci.Usa, 104, 2007
2ZBD
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BU of 2zbd by Molmil
Crystal Structure of the SR Calcium Pump with Bound Aluminium Fluoride, ADP and Calcium
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Toyoshima, C, Nomura, H, Tsuda, T, Ogawa, H, Norimatsu, Y.
Deposit date:2007-10-20
Release date:2007-11-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Lumenal gating mechanism revealed in calcium pump crystal structures with phosphate analogues
Nature, 432, 2004

222415

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