3EHV
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4WZP
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![BU of 4wzp by Molmil](/molmil-images/mine/4wzp) | Ser65 phosphorylated ubiquitin, major conformation | Descriptor: | SULFATE ION, ubiquitin | Authors: | Wauer, T, Wagstaff, J, Freund, S.M.V, Komander, D. | Deposit date: | 2014-11-20 | Release date: | 2015-01-14 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Ubiquitin Ser65 phosphorylation affects ubiquitin structure, chain assembly and hydrolysis. Embo J., 34, 2015
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1ZW7
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![BU of 1zw7 by Molmil](/molmil-images/mine/1zw7) | Elimination of the C-cap in Ubiquitin Structure, Dynamics and Thermodynamic Consequences | Descriptor: | Ubiquitin | Authors: | Ermolenko, D.N, Dangi, B, Gronenborn, A.M, Makhatadze, G.I. | Deposit date: | 2005-06-03 | Release date: | 2006-05-16 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Elimination of the C-cap in ubiquitin-structure, dynamics and thermodynamic consequences. Biophys.Chem., 126, 2007
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2BGF
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3EEC
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![BU of 3eec by Molmil](/molmil-images/mine/3eec) | X-ray structure of human ubiquitin Cd(II) adduct | Descriptor: | CADMIUM ION, Ubiquitin | Authors: | Falini, G, Fermani, S, Tosi, G, Arnesano, F, Natile, G. | Deposit date: | 2008-09-04 | Release date: | 2009-03-10 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Structural probing of Zn(II), Cd(II) and Hg(II) binding to human ubiquitin. Chem.Commun.(Camb.), 45, 2008
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3EFU
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2D3G
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![BU of 2d3g by Molmil](/molmil-images/mine/2d3g) | Double sided ubiquitin binding of Hrs-UIM | Descriptor: | ubiquitin, ubiquitin interacting motif from hepatocyte growth factor-regulated tyrosine kinase substrate | Authors: | Hirano, S, Kawasaki, M, Kato, R, Wakatsuki, S. | Deposit date: | 2005-09-28 | Release date: | 2005-12-20 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Double-sided ubiquitin binding of Hrs-UIM in endosomal protein sorting Nat.Struct.Mol.Biol., 13, 2006
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2DAF
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![BU of 2daf by Molmil](/molmil-images/mine/2daf) | Solution Structure of the Novel Identified Ubiquitin-like Domain in the Human Hypothetical Protein FLJ35834 | Descriptor: | FLJ35834 protein | Authors: | Zhao, C, Kigawa, T, Saito, K, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-12-14 | Release date: | 2006-06-14 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution Structure of the Novel Identified Ubiquitin-like Domain in the Human Hypothetical Protein FLJ35834 To be Published
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3B08
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![BU of 3b08 by Molmil](/molmil-images/mine/3b08) | Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin | Descriptor: | Polyubiquitin-C, RanBP-type and C3HC4-type zinc finger-containing protein 1, ZINC ION, ... | Authors: | Sato, Y, Fujita, H, Yoshikawa, A, Yamashita, M, Yamagata, A, Kaiser, S.E, Iwai, K, Fukai, S. | Deposit date: | 2011-06-07 | Release date: | 2011-12-14 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.701 Å) | Cite: | Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex Proc.Natl.Acad.Sci.USA, 108, 2011
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2DEN
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1NDD
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![BU of 1ndd by Molmil](/molmil-images/mine/1ndd) | STRUCTURE OF NEDD8 | Descriptor: | CHLORIDE ION, PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8), SULFATE ION | Authors: | Whitby, F.G, Xia, G, Pickart, C.M, Hill, C.P. | Deposit date: | 1998-08-21 | Release date: | 1999-02-23 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Crystal structure of the human ubiquitin-like protein NEDD8 and interactions with ubiquitin pathway enzymes. J.Biol.Chem., 273, 1998
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1L2N
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![BU of 1l2n by Molmil](/molmil-images/mine/1l2n) | Smt3 Solution Structure | Descriptor: | Ubiquitin-like protein SMT3 | Authors: | Sheng, W, Liao, X. | Deposit date: | 2002-02-22 | Release date: | 2002-03-06 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure of a yeast ubiquitin-like protein Smt3: the role of structurally less defined sequences in protein-protein recognitions. Protein Sci., 11, 2002
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1OGW
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![BU of 1ogw by Molmil](/molmil-images/mine/1ogw) | Synthetic Ubiquitin with fluoro-Leu at 50 and 67 | Descriptor: | UBIQUITIN | Authors: | Alexeev, D, Ramage, R, Young, D.W, Sawyer, L. | Deposit date: | 2003-05-13 | Release date: | 2003-05-30 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.32 Å) | Cite: | Synthesis, Structural and Biological Studies of Ubiquitin Mutants Containing (2S, 4S)-5-Fluoroleucine Residues Strategically Placed in the Hydrophobic Core Chembiochem, 4, 2003
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1P1A
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![BU of 1p1a by Molmil](/molmil-images/mine/1p1a) | NMR structure of ubiquitin-like domain of hHR23B | Descriptor: | UV excision repair protein RAD23 homolog B | Authors: | Ryu, K.S, Lee, K.J, Bae, S.H, Kim, B.K, Kim, K.A, Choi, B.S. | Deposit date: | 2003-04-11 | Release date: | 2004-07-13 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Binding surface mapping of intra- and interdomain interactions among hHR23B, ubiquitin, and polyubiquitin binding site 2 of S5a J.Biol.Chem., 278, 2003
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1P98
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1M94
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![BU of 1m94 by Molmil](/molmil-images/mine/1m94) | Solution Structure of the Yeast Ubiquitin-Like Modifier Protein Hub1 | Descriptor: | Protein YNR032c-a | Authors: | Ramelot, T.A, Cort, J.R, Yee, A.A, Semesi, A, Edwards, A.M, Arrowsmith, C.H, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG) | Deposit date: | 2002-07-26 | Release date: | 2002-12-11 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution Structure of the Yeast Ubiquitin-Like Modifier Protein Hub1 J.STRUCT.FUNCT.GENOM., 4, 2003
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1MG8
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![BU of 1mg8 by Molmil](/molmil-images/mine/1mg8) | NMR structure of ubiquitin-like domain in murine Parkin | Descriptor: | Parkin | Authors: | Tashiro, M, Okubo, S, Shimotakahara, S, Hatanaka, H, Yasuda, H, Kainosho, M, Yokoyama, S, Shindo, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2002-08-15 | Release date: | 2003-04-08 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | NMR structure of ubiquitin-like domain in PARKIN: Gene product of familial Parkinson's disease. J.Biomol.NMR, 25, 2003
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1P0R
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![BU of 1p0r by Molmil](/molmil-images/mine/1p0r) | Solution Structure of UBL5 a human Ubiquitin-Like Protein | Descriptor: | ubiquitin-like 5 | Authors: | McNally, T, Huang, Q, Janis, R.S, Liu, Z, Olejniczak, E.T, Reilly, R.M. | Deposit date: | 2003-04-10 | Release date: | 2003-10-28 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Structural analysis of UBL5, a novel ubiquitin-like modifier Protein Sci., 12, 2003
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7CAP
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![BU of 7cap by Molmil](/molmil-images/mine/7cap) | Cyclic Lys48-linked triubiquitin | Descriptor: | Ubiquitin, ZINC ION | Authors: | Hiranyakorn, M, Yanaka, S, Satoh, T, Wilasri, T, Jityuti, B, Yagi-Utsumi, T, Kato, K. | Deposit date: | 2020-06-09 | Release date: | 2020-08-19 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.33 Å) | Cite: | NMR Characterization of Conformational Interconversions of Lys48-Linked Ubiquitin Chains. Int J Mol Sci, 21, 2020
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7KEO
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![BU of 7keo by Molmil](/molmil-images/mine/7keo) | Crystal structure of K29-linked di-ubiquitin in complex with synthetic antigen binding fragment | Descriptor: | PHOSPHATE ION, Synthetic antigen binding fragment, heavy chain, ... | Authors: | Yu, Y, Zheng, Q, Erramilli, S, Pan, M, Kossiakoff, A, Liu, L, Zhao, M. | Deposit date: | 2020-10-11 | Release date: | 2021-07-28 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | K29-linked ubiquitin signaling regulates proteotoxic stress response and cell cycle. Nat.Chem.Biol., 17, 2021
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7F0N
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7EAL
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7EAO
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7EB9
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7E62
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![BU of 7e62 by Molmil](/molmil-images/mine/7e62) | Mouse TAB2 NZF in complex with Lys6-linked diubiquitin | Descriptor: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, TGF-beta-activated kinase 1 and MAP3K7-binding protein 2, Ubiquitin, ... | Authors: | Sato, Y, Li, Y, Okatsu, K, Fukai, S. | Deposit date: | 2021-02-21 | Release date: | 2021-08-18 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.99 Å) | Cite: | Structural basis for specific recognition of K6-linked polyubiquitin chains by the TAB2 NZF domain. Biophys.J., 120, 2021
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