PDB: 2236 件ウェブページステータス検索Chemie searchBIRD

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3MII	Crystal structure of Y0R391Cp/HSP33 from Saccharomyces cerevisiae 分子名称: GLYCEROL, Probable chaperone protein HSP33, SULFATE ION, ... 著者 Guo, P.-C, Zhou, Y.-Y, Zhou, C.-Z, Li, W.-F. 登録日 2010-04-10 公開日 2010-12-08 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of Hsp33/YOR391Cp from the yeast Saccharomyces cerevisiae Acta Crystallogr.,Sect.F, 66, 2010
5SP3	PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000450476923 - (S,R) isomer 分子名称: Non-structural protein 3, [(2S,6R)-6-methyl-4-(9H-pyrimido[4,5-b]indol-4-yl)morpholin-2-yl]methanol 著者 Correy, G.J, Fraser, J.S. 登録日 2022-06-09 公開日 2022-07-13 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.01 Å) 主引用文献 Iterative computational design and crystallographic screening identifies potent inhibitors targeting the Nsp3 macrodomain of SARS-CoV-2. Proc.Natl.Acad.Sci.USA, 120, 2023
1IZY	Crystal structure of Hsp31 分子名称: Hsp31 著者 Cha, S.S, Lee, S.J. 登録日 2002-10-16 公開日 2003-10-16 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structures of human DJ-1 and Escherichia coli Hsp31, which share an evolutionarily conserved domain J.Biol.Chem., 278, 2003
3KKL	Crystal structure of functionally unknown HSP33 from Saccharomyces cerevisiae 分子名称: Probable chaperone protein HSP33 著者 Hwang, K.Y, Sung, M.W, Lee, W.H. 登録日 2009-11-05 公開日 2010-03-31 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Crystal structure of functionally unknown HSP33 from Saccharomyces cerevisiae To be Published
1IZZ	Crystal structure of Hsp31 分子名称: Hsp31 著者 Cha, S.S, Lee, S.J. 登録日 2002-10-16 公開日 2003-10-16 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Crystal structures of human DJ-1 and Escherichia coli Hsp31, which share an evolutionarily conserved domain J.Biol.Chem., 278, 2003
1HW7	HSP33, HEAT SHOCK PROTEIN WITH REDOX-REGULATED CHAPERONE ACTIVITY 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, HEAT SHOCK PROTEIN HSP33, SULFATE ION, ... 著者 Vijayalakshmi, J, Mukhergee, M.K, Graumann, J, Jakob, U, Saper, M.A. 登録日 2001-01-09 公開日 2001-05-16 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The 2.2 A crystal structure of Hsp33: a heat shock protein with redox-regulated chaperone activity. Structure, 9, 2001
5I22	Amphiphysin SH3 in complex with Chikungunya virus nsP3 peptide 分子名称: CHIKV nsP3 peptide, Myc box-dependent-interacting protein 1 著者 Tossavainen, H, Aitio, O, Hellman, M, Saksela, K, Permi, P. 登録日 2016-02-04 公開日 2016-06-15 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Structural Basis of the High Affinity Interaction between the Alphavirus Nonstructural Protein-3 (nsP3) and the SH3 Domain of Amphiphysin-2. J.Biol.Chem., 291, 2016
1N57	Crystal Structure of Chaperone Hsp31 分子名称: Chaperone Hsp31, MAGNESIUM ION 著者 Quigley, P.M, Korotkov, K, Baneyx, F, Hol, W.G.J. 登録日 2002-11-04 公開日 2003-03-18 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The 1.6A Crystal Structure of the Class of Chaperone Represented by Escherichia coli Hsp31 Reveals a Putative Catalytic Triad Proc.Natl.Acad.Sci.USA, 100, 2003
3PVI	D34G MUTANT OF PVUII ENDONUCLEASE COMPLEXED WITH COGNATE DNA SHOWS THAT ASP34 IS DIRECTLY INVOLVED IN DNA RECOGNITION AND INDIRECTLY INVOLVED IN CATALYSIS 分子名称: DNA (5'-D(*TP*GP*AP*CP*CP*AP*GP*CP*TP*GP*GP*TP*C)-3'), PROTEIN (PVUII ENDONUCLEASE) 著者 Horton, J.R, Cheng, X. 登録日 1998-10-09 公開日 1998-10-14 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Asp34 of PvuII endonuclease is directly involved in DNA minor groove recognition and indirectly involved in catalysis. J.Mol.Biol., 284, 1998
7TX5	Neutron crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ADP-ribose at 293 K (C2 crystal form) 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Papain-like protease nsp3 著者 Correy, G.J, Fraser, J.S, Kovalevsky, A. 登録日 2022-02-07 公開日 2022-02-23 最終更新日 2023-10-25 実験手法 NEUTRON DIFFRACTION (1.95 Å), X-RAY DIFFRACTION 主引用文献 The mechanisms of catalysis and ligand binding for the SARS-CoV-2 NSP3 macrodomain from neutron and x-ray diffraction at room temperature. Sci Adv, 8, 2022
7TX4	Neutron crystal structure of SARS-CoV-2 NSP3 macrodomain at 293 K (P21 crystal form) 分子名称: Papain-like protease nsp3 著者 Correy, G.J, Fraser, J.S, Kovalevsky, A. 登録日 2022-02-07 公開日 2022-02-23 最終更新日 2023-10-25 実験手法 NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION 主引用文献 The mechanisms of catalysis and ligand binding for the SARS-CoV-2 NSP3 macrodomain from neutron and x-ray diffraction at room temperature. Sci Adv, 8, 2022
6WKT	Cu(I)-bound Copper Storage Protein BsCsp3 分子名称: Csp3 著者 Chen, J.Z, Oken, A, Dennison, C, Lee, J, David, S. 登録日 2020-04-16 公開日 2021-04-21 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Cu(I)-bound Copper Storage Protein BsCsp3 To Be Published
1QVZ	Crystal structure of the S. cerevisiae YDR533c protein 分子名称: YDR533c protein 著者 Graille, M, Leulliot, N, Quevillon-Cheruel, S, van Tilbeurgh, H. 登録日 2003-08-29 公開日 2004-03-30 最終更新日 2021-11-10 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structure of the YDR533c S. cerevisiae protein, a class II member of the Hsp31 family STRUCTURE, 12, 2004
7W3R	USP34 catalytic domain 分子名称: Ubiquitin carboxyl-terminal hydrolase 34, ZINC ION 著者 Xu, G.L, Ming, Z.H. 登録日 2021-11-26 公開日 2022-06-01 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Structural Insights into the Catalytic Mechanism and Ubiquitin Recognition of USP34. J.Mol.Biol., 434, 2022
7W3U	USP34 catalytic domain in complex with UbPA 分子名称: Polyubiquitin-B, Ubiquitin carboxyl-terminal hydrolase 34, ZINC ION, ... 著者 Xu, G.L, Ming, Z.H. 登録日 2021-11-26 公開日 2022-06-01 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (3.13 Å) 主引用文献 Structural Insights into the Catalytic Mechanism and Ubiquitin Recognition of USP34. J.Mol.Biol., 434, 2022
1QVW	Crystal structure of the S. cerevisiae YDR533c protein 分子名称: GLYCEROL, YDR533c protein 著者 Graille, M, Leulliot, N, Quevillon-Cheruel, S, van Tilbeurgh, H. 登録日 2003-08-29 公開日 2004-03-30 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of the YDR533c S. cerevisiae protein, a class II member of the Hsp31 family STRUCTURE, 12, 2004
1QVV	Crystal structure of the S. cerevisiae YDR533c protein 分子名称: YDR533c protein 著者 Graille, M, Leulliot, N, Quevillon-Cheruel, S, van Tilbeurgh, H. 登録日 2003-08-29 公開日 2004-03-30 最終更新日 2020-07-15 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Crystal structure of the YDR533c S. cerevisiae protein, a class II member of the Hsp31 family STRUCTURE, 12, 2004
6W7H	Co-crystal structures of CHIKV nsP3 macrodomain with pyrimidone fragments 分子名称: 6-methyl-2-oxo-2,5-dihydropyrimidine-4-carboxylic acid, Nonstructural polyprotein 著者 Zhang, S, Garzan, A, Augelli-Szafran, C.E, Pathak, A.K, Wu, M. 登録日 2020-03-19 公開日 2021-01-13 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Pyrimidone inhibitors targeting Chikungunya Virus nsP3 macrodomain by fragment-based drug design. Plos One, 16, 2021
6W0T	Co-crystal structures of CHIKV nsP3 macrodomain with pyrimidone fragments 分子名称: 6-(2-methylpropyl)-2-oxidanylidene-5~{H}-pyrimidine-4-carboxylic acid, Non-structural protein 3 著者 Wu, M, Zhang, S. 登録日 2020-03-02 公開日 2021-01-13 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Pyrimidone inhibitors targeting Chikungunya Virus nsP3 macrodomain by fragment-based drug design. Plos One, 16, 2021
6W8M	Co-crystal structures of CHIKV nsP3 macrodomain with pyrimidone fragments 分子名称: 2-oxo-1,2-dihydroquinazoline-4-carboxylic acid, Nonstructural polyprotein 著者 Zhang, S, Garzan, A, Pathak, A.K, Augelli-Szafran, C.E, Wu, M. 登録日 2020-03-20 公開日 2021-01-13 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Pyrimidone inhibitors targeting Chikungunya Virus nsP3 macrodomain by fragment-based drug design. Plos One, 16, 2021
6W8K	Co-crystal structures of CHIKV nsP3 macrodomain with pyrimidone fragments 分子名称: 5,6-dimethyl-2-oxo-2,3-dihydropyrimidine-4-carboxylic acid, Nonstructural polyprotein 著者 Zhang, S, Garzan, A, Augelli-Szafran, C.E, Pathak, A.K, Wu, M. 登録日 2020-03-20 公開日 2021-01-13 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Pyrimidone inhibitors targeting Chikungunya Virus nsP3 macrodomain by fragment-based drug design. Plos One, 16, 2021
6W8Q	Co-crystal structures of CHIKV nsP3 macrodomain with pyrimidone fragments 分子名称: 2-oxo-1,2,5,6,7,8-hexahydroquinazoline-4-carboxylic acid, Nonstructural polyprotein 著者 Zhang, S, Garzan, A, Pathak, A.K, Augelli-Szafran, C.E, Wu, M. 登録日 2020-03-21 公開日 2021-01-13 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Pyrimidone inhibitors targeting Chikungunya Virus nsP3 macrodomain by fragment-based drug design. Plos One, 16, 2021
5FIG	APO-CSP3 (COPPER STORAGE PROTEIN 3) FROM BACILLUS SUBTILIS 分子名称: CSP3 著者 Vita, N, Landolfi, G, Basle, A, Platsaki, S, Waldron, K, Dennison, C. 登録日 2015-09-25 公開日 2016-10-12 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Bacterial cytosolic proteins with a high capacity for Cu(I) that protect against copper toxicity. Sci Rep, 6, 2016
5OHN	Crystal structure of USP30 in covalent complex with ubiquitin propargylamide (low resolution) 分子名称: Polyubiquitin-B, Ubiquitin carboxyl-terminal hydrolase 30,Ubiquitin carboxyl-terminal hydrolase 30, ZINC ION 著者 Gersch, M, Komander, D. 登録日 2017-07-17 公開日 2017-09-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Mechanism and regulation of the Lys6-selective deubiquitinase USP30. Nat. Struct. Mol. Biol., 24, 2017
5OHP	Crystal structure of USP30 (C77A) in complex with Lys6-linked diubiquitin 分子名称: Polyubiquitin-B, Ubiquitin carboxyl-terminal hydrolase 30, ZINC ION 著者 Gersch, M, Komander, D. 登録日 2017-07-17 公開日 2017-09-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Mechanism and regulation of the Lys6-selective deubiquitinase USP30. Nat. Struct. Mol. Biol., 24, 2017

 

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