PDB: 117 件ウェブページステータス検索Chemie searchBIRD

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9JEW	Crystal structure of a cupin protein (tm1459, C106V mutant) in iron (Fe) substituted form 分子名称: Cupin type-2 domain-containing protein, FE (III) ION 著者 Fujieda, N, Ichihashi, H, Kurisu, G, Itoh, S. 登録日 2024-09-03 公開日 2025-05-07 最終更新日 2025-07-02 実験手法 X-RAY DIFFRACTION (1.08 Å) 主引用文献 Unusual Self-Hydroxylation in 4-Histidine Tetrad-Supporting Nonheme Iron Center. Chem Asian J, 20, 2025
8ZYH	Crystal structure of a cupin protein (tm1459, I49C-4py/H52A/H54A/C106D mutant) in copper (Cu) substituted form 分子名称: 4-THIOPYRIDINE, COPPER (II) ION, Cupin type-2 domain-containing protein, ... 著者 Morita, Y, Kubo, H, Matsumoto, R, Fujieda, N. 登録日 2024-06-17 公開日 2024-09-04 最終更新日 2025-03-19 実験手法 X-RAY DIFFRACTION (1.07 Å) 主引用文献 A thiopyridine-bound mirror-image copper center in an artificial non-heme metalloenzyme. J.Inorg.Biochem., 260, 2024
8ZYG	Crystal structure of a cupin protein (tm1459, I49C-4py/H52A/C106D mutant) in copper (Cu) substituted form 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, Cupin type-2 domain-containing protein, ... 著者 Morita, Y, Kubo, H, Matsumoto, R, Fujieda, N. 登録日 2024-06-17 公開日 2024-09-04 最終更新日 2025-03-19 実験手法 X-RAY DIFFRACTION (1.08 Å) 主引用文献 A thiopyridine-bound mirror-image copper center in an artificial non-heme metalloenzyme. J.Inorg.Biochem., 260, 2024
8OZ8	Crystal Structure of an Hydroxynitrile lyase variant (H96A) from Granulicella tundricola 分子名称: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 3-CARBOXY-N,N,N-TRIMETHYLPROPAN-1-AMINIUM, BROMIDE ION, ... 著者 Bento, I, Coloma, J, Hagedoorn, P.-L, Hanefeld, U. 登録日 2023-05-08 公開日 2024-04-10 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Can a Hydroxynitrile Lyase Catalyze an Oxidative Cleavage? Acs Catalysis, 13, 2023
8HLF	Crystal structure of DddK-DMSOP complex 分子名称: 3-[dimethyl(oxidanyl)-$l^{4}-sulfanyl]propanoic acid, MANGANESE (II) ION, Novel protein with potential Cupin domain 著者 Peng, M, Li, C.Y, Zhang, Y.Z. 登録日 2022-11-30 公開日 2023-10-04 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 DMSOP-cleaving enzymes are diverse and widely distributed in marine microorganisms. Nat Microbiol, 8, 2023
8E8W	Crystal structure of SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697 mononuclear Fe(II) structure on the HDO cofactor assembly pathway 分子名称: Cupin domain-containing diiron protein, FE (II) ION 著者 McBride, M.J, Boal, A.K. 登録日 2022-08-25 公開日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697 mononuclear Fe(II) structure on the HDO cofactor assembly pathway To Be Published
8CH4	Crystal structure of the ring cleaving dioxygenase 5-nitrosalicylate 1,2-dioxygenase from Bradyrhizobium sp. 分子名称: 5-nitrosalicylic acid 1,2-dioxygenase, FE (III) ION 著者 Ferraroni, M, Stolz, A, Eppinger, E. 登録日 2023-02-07 公開日 2023-07-05 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of the monocupin ring-cleaving dioxygenase 5-nitrosalicylate 1,2-dioxygenase from Bradyrhizobium sp. Acta Crystallogr D Struct Biol, 79, 2023
7ZYC	BeKdgF with Zn 分子名称: Cupin, GLYCEROL, ZINC ION 著者 Fredslund, F, Teze, D, Welner, D.H. 登録日 2022-05-24 公開日 2023-06-14 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 BeKdgF with Ca To Be Published
7ZYB	BeKdgF with Ca 分子名称: CALCIUM ION, Cupin, GLYCEROL 著者 Fredslund, F, Teze, D, Welner, D.H. 登録日 2022-05-24 公開日 2023-06-14 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 BeKdgF with Ca To Be Published
8HJZ	Crystal structure of a cupin protein (tm1459, H52A/H58Q mutant) in copper (Cu) substituted form 分子名称: COPPER (II) ION, Cupin_2 domain-containing protein 著者 Matsumoto, R, Kurisu, G, Fujieda, N. 登録日 2022-11-24 公開日 2023-06-14 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 An artificial metallolyase with pliable 2-His-1-carboxylate facial triad for stereoselective Michael addition. Chem Sci, 14, 2023
8HJX	Crystal structure of a cupin protein (tm1459, H52A/H58E mutant) in copper (Cu) substituted form 分子名称: COPPER (II) ION, Cupin_2 domain-containing protein 著者 Matsumoto, R, Kurisu, G, Fujieda, N. 登録日 2022-11-24 公開日 2023-06-14 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 An artificial metallolyase with pliable 2-His-1-carboxylate facial triad for stereoselective Michael addition. Chem Sci, 14, 2023
8HJY	Crystal structure of a cupin protein (tm1459, H52A/H58E/F104W mutant) in copper (Cu) substituted form 分子名称: COPPER (II) ION, Cupin_2 domain-containing protein 著者 Matsumoto, R, Kurisu, G, Fujieda, N. 登録日 2022-11-24 公開日 2023-06-14 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 An artificial metallolyase with pliable 2-His-1-carboxylate facial triad for stereoselective Michael addition. Chem Sci, 14, 2023
8AWN	Crystal structure of a manganese-containing cupin (tm1459) from Thermotoga maritima, variant C106Q 分子名称: CHLORIDE ION, Cupin_2 domain-containing protein 著者 Grininger, C, Steiner, K, Gruber, K, Pavkov-Keller, T. 登録日 2022-08-30 公開日 2023-03-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Engineering TM1459 for Stabilisation against Inactivation by Amino Acid Oxidation Chem Ing Tech, 2023
8AWP	Crystal structure of a manganese-containing cupin (tm1459) from Thermotoga maritima, variant 208 (V19I/R23H/M38I/I60F/C106Q) 分子名称: Cupin_2 domain-containing protein 著者 Grininger, C, Steiner, K, Gruber, K, Pavkov-Keller, T. 登録日 2022-08-30 公開日 2023-03-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.595 Å) 主引用文献 Engineering TM1459 for Stabilisation against Inactivation by Amino Acid Oxidation Chem Ing Tech, 2023
8AWO	Crystal structure of a manganese-containing cupin (tm1459) from Thermotoga maritima, variant AIFQ (Y7A/M38I/Y83F/C106Q) 分子名称: Cupin_2 domain-containing protein 著者 Grininger, C, Steiner, K, Gruber, K, Pavkov-Keller, T. 登録日 2022-08-30 公開日 2023-03-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Engineering TM1459 for Stabilisation against Inactivation by Amino Acid Oxidation Chem Ing Tech, 2023
8HFB	Evolved variant of quercetin 2,4-dioxygenase from Bacillus subtilis 分子名称: 1,2-ETHANEDIOL, GLYCEROL, NICKEL (II) ION, ... 著者 Eom, H, Song, W.J. 登録日 2022-11-10 公開日 2023-03-08 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Underlying Role of Hydrophobic Environments in Tuning Metal Elements for Efficient Enzyme Catalysis. J.Am.Chem.Soc., 145, 2023
7ZVM	Thermococcus barophilus phosphomannose isomerase protein structure at 1.6 A 分子名称: MAGNESIUM ION, Mannose-6-phosphate isomerase 著者 Hoh, F, Calio, A. 登録日 2022-05-16 公開日 2022-08-24 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Unravelling the Adaptation Mechanisms to High Pressure in Proteins. Int J Mol Sci, 23, 2022
7ZVY	Thermococcus kadokarensis phosphomannose isomerase 分子名称: Cupin_2 domain-containing protein, ZINC ION 著者 Hoh, f, Calio, A. 登録日 2022-05-17 公開日 2022-08-24 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 Unravelling the Adaptation Mechanisms to High Pressure in Proteins. Int J Mol Sci, 23, 2022
6XCV	Crystal structure of apo SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697 分子名称: Cupin domain-containing diiron protein 著者 McBride, M.J, Boal, A.K. 登録日 2020-06-09 公開日 2021-01-13 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Structure and assembly of the diiron cofactor in the heme-oxygenase-like domain of the N -nitrosourea-producing enzyme SznF. Proc.Natl.Acad.Sci.USA, 118, 2021
6VZY	Crystal structure of SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697 with a diiron(II) central domain cofactor 分子名称: Cupin domain-containing diiron protein, FE (II) ION 著者 McBride, M.J, Boal, A.K. 登録日 2020-02-28 公開日 2021-01-13 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Structure and assembly of the diiron cofactor in the heme-oxygenase-like domain of the N -nitrosourea-producing enzyme SznF. Proc.Natl.Acad.Sci.USA, 118, 2021
6L2F	Crystal structure of a cupin protein (tm1459, H54AH58A mutant) in copper (Cu) substituted form 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, COPPER (II) ION, ... 著者 Fujieda, N, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S. 登録日 2019-10-03 公開日 2020-04-01 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.23 Å) 主引用文献 Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes. Angew.Chem.Int.Ed.Engl., 59, 2020
6L2D	Crystal structure of a cupin protein (tm1459) in copper (Cu) substituted form 分子名称: COPPER (II) ION, Cupin_2 domain-containing protein 著者 Fujieda, N, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S. 登録日 2019-10-03 公開日 2020-04-01 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.198 Å) 主引用文献 Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes. Angew.Chem.Int.Ed.Engl., 59, 2020
6L2E	Crystal structure of a cupin protein (tm1459, H52A mutant) in copper (Cu) substituted form 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, Cupin_2 domain-containing protein 著者 Fujieda, N, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S. 登録日 2019-10-03 公開日 2020-04-01 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.201 Å) 主引用文献 Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes. Angew.Chem.Int.Ed.Engl., 59, 2020
6A53	Crystal structure of DddK 分子名称: MANGANESE (II) ION, Novel protein with potential Cupin domain 著者 Zhang, Y.Z, Li, C.Y. 登録日 2018-06-21 公開日 2019-02-20 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure-Function Analysis Indicates that an Active-Site Water Molecule Participates in Dimethylsulfoniopropionate Cleavage by DddK. Appl. Environ. Microbiol., 85, 2019
6A55	Crystal structure of DddK mutant Y122A 分子名称: 3-(dimethyl-lambda~4~-sulfanyl)propanoic acid, MANGANESE (II) ION, Novel protein with potential Cupin domain 著者 Zhang, Y.Z, Li, C.Y. 登録日 2018-06-21 公開日 2019-02-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure-Function Analysis Indicates that an Active-Site Water Molecule Participates in Dimethylsulfoniopropionate Cleavage by DddK. Appl. Environ. Microbiol., 85, 2019

 

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