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5IU1
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N-terminal PAS domain homodimer of PpANR MAP3K from Physcomitrella patens.
分子名称: CTR1-like protein, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Stevenson, R.R, Trinh, C.H, Edwards, T.A, Cuming, A.C.
登録日2016-03-17
公開日2016-06-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance.
Plant Cell, 28, 2016
3UMD
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BU of 3umd by Molmil
Structure of pB intermediate of Photoactive yellow protein (PYP) at pH 4.
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Tripathi, S, Srajer, V, Purwar, N, Henning, R, Schmidt, M.
登録日2011-11-13
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献pH Dependence of the Photoactive Yellow Protein Photocycle Investigated by Time-Resolved Crystallography.
Biophys.J., 102, 2012
7AV6
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BU of 7av6 by Molmil
FAST in a domain-swapped dimer form
分子名称: FORMIC ACID, Photoactive yellow protein
著者Bukhdruker, S, Remeeva, A, Ruchkin, D, Gorbachev, D, Povarova, N, Mineev, K, Goncharuk, S, Baranov, M, Mishin, A, Borshchevskiy, V.
登録日2020-11-04
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献NanoFAST: structure-based design of a small fluorogen-activating protein with only 98 amino acids.
Chem Sci, 12, 2021
6ZJ8
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BU of 6zj8 by Molmil
Structure of the PAS domain from Bordetella pertussis BvgS
分子名称: Virulence sensor protein BvgS
著者Clantin, B, Dupre, E, Jacob-Dubuisson, F, Villeret, V.
登録日2020-06-28
公開日2020-11-11
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insight into the role of the PAS domainfor signal transduction in sensor-kinase BvgS.
J.Bacteriol., 203, 2021
6UMZ
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BU of 6umz by Molmil
Crystal structure of photoactive yellow protein (PYP); 3-Br-p-coumaric acid chromophore
分子名称: (2E)-3-(3-bromo-4-hydroxyphenyl)prop-2-enoic acid, Photoactive yellow protein
著者Lin, C.-Y, Romei, M.G, Boxer, S.G.
登録日2019-10-10
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Structural and spectroscopic characterization of photoactive yellow protein and photoswitchable fluorescent protein constructs containing heavy atoms.
J Photochem Photobiol A Chem, 401, 2020
4EW7
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The crystal structure of conjugative transfer PAS_like domain from Salmonella enterica subsp. enterica serovar Typhimurium
分子名称: ACETIC ACID, CHLORIDE ION, Conjugative transfer: regulation, ...
著者Wu, R, Jedrzejczak, R.P, Brown, R.N, Cort, J.R, Heffron, F, Nakayasu, E.S, Adkins, J.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)
登録日2012-04-26
公開日2012-09-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献The crystal structure of conjugative transfer PAS_like domain from Salmonella enterica subsp. enterica serovar Typhimurium
To be Published
9AZ7
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BU of 9az7 by Molmil
Chloride Sites in Photoactive Yellow Protein
分子名称: 4'-HYDROXYCINNAMIC ACID, CHLORIDE ION, Photoactive yellow protein
著者Dyda, F, Schotte, F, Anfinrud, P, Cho, H.S.
登録日2024-03-10
公開日2024-03-20
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Watching a signaling protein function: What has been learned over four decades of time-resolved studies of photoactive yellow protein.
Struct Dyn., 11, 2024
9AZ9
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Chloride Sites in Photoactive Yellow Protein (Chloride-Free Reference Structure)
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Dyda, F, Schotte, F, Anfinrud, P, Cho, H.S.
登録日2024-03-10
公開日2024-03-20
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Watching a signaling protein function: What has been learned over four decades of time-resolved studies of photoactive yellow protein.
Struct Dyn., 11, 2024
1F9I
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BU of 1f9i by Molmil
CRYSTAL STRUCTURE OF THE PHOTOACTIVE YELLOW PROTEIN MUTANT Y42F
分子名称: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
著者Brudler, R, Meyer, T.E, Genick, U.K, Tollin, G, Getzoff, E.D.
登録日2000-07-10
公開日2000-07-21
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Coupling of hydrogen bonding to chromophore conformation and function in photoactive yellow protein.
Biochemistry, 39, 2000
2QWS
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BU of 2qws by Molmil
Neutron and X-ray structural studies of short hydrogen bonds in Photoactive Yellow Protein (PYP)
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Fisher, S.Z, Langan, P.
登録日2007-08-10
公開日2008-03-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Neutron and X-ray structural studies of short hydrogen bonds in photoactive yellow protein (PYP)
Acta Crystallogr.,Sect.D, 63, 2007
7SJJ
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BU of 7sjj by Molmil
Crystal structure of photoactive yellow protein (PYP); F96oCNF construct
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Weaver, J.B, Kirsh, J.M, Boxer, S.G.
登録日2021-10-17
公開日2022-05-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Nitrile Infrared Intensities Characterize Electric Fields and Hydrogen Bonding in Protic, Aprotic, and Protein Environments.
J.Am.Chem.Soc., 144, 2022
2QJ7
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BU of 2qj7 by Molmil
PYP ultra-high resolution of a bacterial photoreceptor
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Coureux, P.D, Fan, Z.P, Stojanoff, V, Genick, U.K.
登録日2007-07-06
公開日2008-05-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Picometer-scale conformational heterogeneity separates functional from nonfunctional States of a photoreceptor protein.
Structure, 16, 2008
1F98
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BU of 1f98 by Molmil
CRYSTAL STRUCTURE OF THE PHOTOACTIVE YELLOW PROTEIN MUTANT T50V
分子名称: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
著者Brudler, R, Meyer, T.E, Genick, U.K, Tollin, G, Getzoff, E.D.
登録日2000-07-07
公開日2000-07-21
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Coupling of hydrogen bonding to chromophore conformation and function in photoactive yellow protein.
Biochemistry, 39, 2000
4WLA
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BU of 4wla by Molmil
Time Resolved Serial Femtosecond Crystallography Captures High Resolution Intermediates of PYP
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Tenboer, J, Schmidt, M.
登録日2014-10-06
公開日2014-12-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein.
Science, 346, 2014
4WL9
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BU of 4wl9 by Molmil
Time Resolved Serial Femtosecond Crystallography Captures High Resolution Intermediates of PYP
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Tenboer, J, Schmidt, M.
登録日2014-10-06
公開日2014-12-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein.
Science, 346, 2014
6UMY
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BU of 6umy by Molmil
Crystal structure of photoactive yellow protein (PYP); F96(4-IF) construct
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Lin, C.-Y, Romei, M.G, Boxer, S.G.
登録日2019-10-10
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (0.923 Å)
主引用文献Structural and spectroscopic characterization of photoactive yellow protein and photoswitchable fluorescent protein constructs containing heavy atoms.
J Photochem Photobiol A Chem, 401, 2020
2D01
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BU of 2d01 by Molmil
Wild Type Photoactive Yellow Protein, P65 Form
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Shimizu, N, Kamikubo, H, Yamazaki, Y, Imamoto, Y, Kataoka, M.
登録日2005-07-21
公開日2006-04-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献The Crystal Structure of the R52Q Mutant Demonstrates a Role for R52 in Chromophore pK(a) Regulation in Photoactive Yellow Protein
Biochemistry, 45, 2006
2D02
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BU of 2d02 by Molmil
R52Q Mutant of Photoactive Yellow Protein, P65 Form
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Shimizu, N, Kamikubo, H, Yamazaki, Y, Imamoto, Y, Kataoka, M.
登録日2005-07-21
公開日2006-04-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献The Crystal Structure of the R52Q Mutant Demonstrates a Role for R52 in Chromophore pK(a) Regulation in Photoactive Yellow Protein
Biochemistry, 45, 2006
7SPV
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BU of 7spv by Molmil
Crystal structure of photoactive yellow protein (PYP); F92oCNF construct
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Weaver, J.B, Kirsh, J.M, Boxer, S.G.
登録日2021-11-03
公開日2022-05-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Nitrile Infrared Intensities Characterize Electric Fields and Hydrogen Bonding in Protic, Aprotic, and Protein Environments.
J.Am.Chem.Soc., 144, 2022
7SPW
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BU of 7spw by Molmil
Crystal structure of photoactive yellow protein (PYP); F62oCNF construct
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Weaver, J.B, Kirsh, J.M, Boxer, S.G.
登録日2021-11-03
公開日2022-05-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Nitrile Infrared Intensities Characterize Electric Fields and Hydrogen Bonding in Protic, Aprotic, and Protein Environments.
J.Am.Chem.Soc., 144, 2022
7SPX
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BU of 7spx by Molmil
Crystal structure of photoactive yellow protein (PYP); F28oCNF construct
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Weaver, J.B, Kirsh, J.M, Boxer, S.G.
登録日2021-11-03
公開日2022-05-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Nitrile Infrared Intensities Characterize Electric Fields and Hydrogen Bonding in Protic, Aprotic, and Protein Environments.
J.Am.Chem.Soc., 144, 2022
6UN2
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BU of 6un2 by Molmil
Crystal structure of photoactive yellow protein (PYP); C69U construct (selenocysteine incorporation)
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Lin, C.-Y, Romei, M.G, Boxer, S.G.
登録日2019-10-10
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Structural and spectroscopic characterization of photoactive yellow protein and photoswitchable fluorescent protein constructs containing heavy atoms.
J Photochem Photobiol A Chem, 401, 2020
6UN0
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BU of 6un0 by Molmil
Crystal structure of photoactive yellow protein (PYP); F96(4-IF) construct with 3-Br-p-coumaric acid chromophore
分子名称: (2E)-3-(3-bromo-4-hydroxyphenyl)prop-2-enoic acid, Photoactive yellow protein
著者Lin, C.-Y, Romei, M.G, Boxer, S.G.
登録日2019-10-10
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献Structural and spectroscopic characterization of photoactive yellow protein and photoswitchable fluorescent protein constructs containing heavy atoms.
J Photochem Photobiol A Chem, 401, 2020
3PHY
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BU of 3phy by Molmil
PHOTOACTIVE YELLOW PROTEIN, DARK STATE (UNBLEACHED), SOLUTION STRUCTURE, NMR, 26 STRUCTURES
分子名称: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
著者Dux, P, Rubinstenn, G, Vuister, G.W, Boelens, R, Mulder, F.A.A, Hard, K, Hoff, W.D, Kroon, A, Crielaard, W, Hellingwerf, K.J, Kaptein, R.
登録日1998-02-06
公開日1998-05-27
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Solution structure and backbone dynamics of the photoactive yellow protein.
Biochemistry, 37, 1998
8AO0
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Solution structure of nanoFAST/HBR-DOM2 complex
分子名称: (5~{Z})-5-[(2,5-dimethoxy-4-oxidanyl-phenyl)methylidene]-2-sulfanylidene-1,3-thiazolidin-4-one, Photoactive yellow protein
著者Lushpa, V.A, Goncharuk, M.V, Goncharuk, S.A, Baleeva, N.S, Baranov, M.S, Mineev, K.S.
登録日2022-08-08
公開日2022-11-23
実験手法SOLUTION NMR
主引用文献Spatial Structure of NanoFAST in the Apo State and in Complex with its Fluorogen HBR-DOM2.
Int J Mol Sci, 23, 2022

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