6N4N
 
 | | Crystal structure of the designed protein DNCR2/danoprevir/NS3a complex | | 分子名称: | (2R,6S,12Z,13aS,14aR,16aS)-6-[(tert-butoxycarbonyl)amino]-14a-[(cyclopropylsulfonyl)carbamoyl]-5,16-dioxo-1,2,3,5,6,7,8 ,9,10,11,13a,14,14a,15,16,16a-hexadecahydrocyclopropa[e]pyrrolo[1,2-a][1,4]diazacyclopentadecin-2-yl 4-fluoro-2H-isoindole-2-carboxylate, NS3 protease, Rosetta-designed danoprevir/NS3a complex reader 2, ... | | 著者 | Wang, Z, Foight, G.W, Baker, D, Maly, D.J. | | 登録日 | 2018-11-19 | | 公開日 | 2019-09-11 | | 最終更新日 | 2023-10-11 | | 実験手法 | X-RAY DIFFRACTION (2.29 Å) | | 主引用文献 | Multi-input chemical control of protein dimerization for programming graded cellular responses.
Nat.Biotechnol., 37, 2019
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8AGT
 | | Yeast RQC complex in state F | | 分子名称: | 25S rRNA, 5.8S rRNA, 5S rRNA, ... | | 著者 | Tesina, P, Buschauer, R, Beckmann, R. | | 登録日 | 2022-07-20 | | 公開日 | 2023-03-08 | | 最終更新日 | 2024-11-06 | | 実験手法 | ELECTRON MICROSCOPY (2.6 Å) | | 主引用文献 | Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control.
Mol.Cell, 83, 2023
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8AAF
 | | Yeast RQC complex in state G | | 分子名称: | 25S rRNA, 5.8S rRNA, 5S rRNA, ... | | 著者 | Tesina, P, Buschauer, R, Beckmann, R. | | 登録日 | 2022-07-01 | | 公開日 | 2023-03-08 | | 最終更新日 | 2024-10-23 | | 実験手法 | ELECTRON MICROSCOPY (2.5 Å) | | 主引用文献 | Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control.
Mol.Cell, 83, 2023
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8AGX
 | | Yeast RQC complex in state with the RING domain of Ltn1 in the IN position | | 分子名称: | 25S rRNA, 5.8S rRNA, 5S rRNA, ... | | 著者 | Tesina, P, Buschauer, R, Beckmann, R. | | 登録日 | 2022-07-20 | | 公開日 | 2023-03-08 | | 最終更新日 | 2024-11-13 | | 実験手法 | ELECTRON MICROSCOPY (2.4 Å) | | 主引用文献 | Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control.
Mol.Cell, 83, 2023
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6CYW
 | | Structure of sphingomyelin in complex with mouse CD1d | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ... | | 著者 | Zajonc, D.M, Wang, J. | | 登録日 | 2018-04-06 | | 公開日 | 2019-04-10 | | 最終更新日 | 2024-10-30 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Control of CD1d-restricted antigen presentation and inflammation by sphingomyelin.
Nat.Immunol., 20, 2019
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4F8D
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4FN3
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4FBI
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8AGZ
 | | Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position | | 分子名称: | 25S rRNA, 5.8S rRNA, 5S rRNA, ... | | 著者 | Tesina, P, Buschauer, R, Beckmann, R. | | 登録日 | 2022-07-20 | | 公開日 | 2023-03-08 | | 最終更新日 | 2024-10-09 | | 実験手法 | ELECTRON MICROSCOPY (2.6 Å) | | 主引用文献 | Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control.
Mol.Cell, 83, 2023
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8AGV
 | | Yeast RQC complex in state H | | 分子名称: | 25S rRNA, 5.8S rRNA, 5S rRNA, ... | | 著者 | Tesina, P, Buschauer, R, Beckmann, R. | | 登録日 | 2022-07-20 | | 公開日 | 2023-03-08 | | 最終更新日 | 2024-10-23 | | 実験手法 | ELECTRON MICROSCOPY (2.6 Å) | | 主引用文献 | Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control.
Mol.Cell, 83, 2023
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8AGW
 | | Yeast RQC complex in state D | | 分子名称: | 25S rRNA, 5.8S rRNA, 5S rRNA, ... | | 著者 | Tesina, P, Buschauer, R, Beckmann, R. | | 登録日 | 2022-07-20 | | 公開日 | 2023-03-08 | | 最終更新日 | 2024-07-24 | | 実験手法 | ELECTRON MICROSCOPY (2.6 Å) | | 主引用文献 | Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control.
Mol.Cell, 83, 2023
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8AGU
 | | Yeast RQC complex in state E | | 分子名称: | 25S rRNA, 5.8S rRNA, 5S rRNA, ... | | 著者 | Tesina, P, Buschauer, R, Beckmann, R. | | 登録日 | 2022-07-20 | | 公開日 | 2023-03-08 | | 最終更新日 | 2024-11-13 | | 実験手法 | ELECTRON MICROSCOPY (2.7 Å) | | 主引用文献 | Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control.
Mol.Cell, 83, 2023
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8WG3
 | | mouse TMEM63b in LMNG-CHS micelle | | 分子名称: | 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, CHOLESTEROL HEMISUCCINATE, CSC1-like protein 2,Green fluorescent protein | | 著者 | Miyata, Y, Takahashi, K, Lee, Y, Sultan, C.S, Kuribayashi, R, Takahashi, M, Hata, K, Bamba, T, Izumi, Y, Liu, K, Uemura, T, Nomura, N, Iwata, S, Nagata, S, Nishizawa, T, Segawa, K. | | 登録日 | 2023-09-20 | | 公開日 | 2024-09-25 | | 最終更新日 | 2025-10-22 | | 実験手法 | ELECTRON MICROSCOPY (3.4 Å) | | 主引用文献 | Membrane structure-responsive lipid scrambling by TMEM63B to control plasma membrane lipid distribution.
Nat.Struct.Mol.Biol., 32, 2025
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8WG4
 | | mouse TMEM63b in DDM-CHS micelle with YN9303-24 Fab | | 分子名称: | 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, CHOLESTEROL HEMISUCCINATE, CSC1-like protein 2,Green fluorescent protein | | 著者 | Miyata, Y, Takahashi, K, Lee, Y, Sultan, C.S, Kuribayashi, R, Takahashi, M, Hata, K, Bamba, T, Izumi, Y, Liu, K, Uemura, T, Nomura, N, Iwata, S, Nagata, S, Nishizawa, T, Segawa, K. | | 登録日 | 2023-09-20 | | 公開日 | 2024-09-25 | | 最終更新日 | 2025-10-22 | | 実験手法 | ELECTRON MICROSCOPY (3.5 Å) | | 主引用文献 | Membrane structure-responsive lipid scrambling by TMEM63B to control plasma membrane lipid distribution.
Nat.Struct.Mol.Biol., 32, 2025
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4OYT
 | | Crystal structure of ternary complex of Plasmodium vivax SHMT with D-serine and folinic acid | | 分子名称: | (2R)-2-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-oxidanyl-propanoic acid, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ... | | 著者 | Chitnumsub, P, Jaruwat, A, Leartsakulpanich, U. | | 登録日 | 2014-02-13 | | 公開日 | 2014-12-10 | | 最終更新日 | 2023-09-27 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Structures of Plasmodium vivax serine hydroxymethyltransferase: implications for ligand-binding specificity and functional control.
Acta Crystallogr.,Sect.D, 70, 2014
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4PFF
 | | Crystal structure of Plasmodium vivax SHMT with PLP Schiff base | | 分子名称: | PYRIDOXAL-5'-PHOSPHATE, Serine hydroxymethyltransferase, putative | | 著者 | Chitnumsub, P, Jaruwat, A, Leartsakulpanich, U. | | 登録日 | 2014-04-29 | | 公開日 | 2014-12-17 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Structures of Plasmodium vivax serine hydroxymethyltransferase: implications for ligand-binding specificity and functional control.
Acta Crystallogr.,Sect.D, 70, 2014
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4PFN
 | | Crystal structure of Plasmodium vivax SHMT with L-serine Schiff base | | 分子名称: | CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE, SERINE, ... | | 著者 | Chitnumsub, P, Jaruwat, A, Leartsakulpanich, U. | | 登録日 | 2014-04-30 | | 公開日 | 2014-12-17 | | 最終更新日 | 2023-09-27 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Structures of Plasmodium vivax serine hydroxymethyltransferase: implications for ligand-binding specificity and functional control.
Acta Crystallogr.,Sect.D, 70, 2014
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4WU8
 | | Structure of trPtNAP-NCP145 | | 分子名称: | DNA (145-MER), Histone H2A type 1, Histone H2B 1.1, ... | | 著者 | Chua, E.Y.D, Davey, C.A. | | 登録日 | 2014-10-31 | | 公開日 | 2015-09-02 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (2.45 Å) | | 主引用文献 | Stereochemical control of nucleosome targeting by platinum-intercalator antitumor agents.
Nucleic Acids Res., 43, 2015
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4WU9
 | | Structure of cisPtNAP-NCP145 | | 分子名称: | DNA (145-MER), Histone H2A type 1, Histone H2B 1.1, ... | | 著者 | Chua, E.Y.D, Davey, G.E, Chin, C.F, Droge, P, Ang, W.H, Davey, C.A. | | 登録日 | 2014-10-31 | | 公開日 | 2015-09-02 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | | 主引用文献 | Stereochemical control of nucleosome targeting by platinum-intercalator antitumor agents.
Nucleic Acids Res., 43, 2015
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5GUX
 | | Cytochrome c-dependent nitric oxide reductase (cNOR) from Pseudomonas aeruginosa in complex with xenon | | 分子名称: | Antibody fab fragment heavy chain, Antibody fab fragment light chain, CALCIUM ION, ... | | 著者 | Ishii, S, Terasaka, E, Sugimoto, H, Shiro, Y, Tosha, T. | | 登録日 | 2016-08-31 | | 公開日 | 2017-08-16 | | 最終更新日 | 2024-11-13 | | 実験手法 | X-RAY DIFFRACTION (3.3 Å) | | 主引用文献 | Dynamics of nitric oxide controlled by protein complex in bacterial system.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
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1V9Y
 | | Crystal Structure of the heme PAS sensor domain of Ec DOS (ferric form) | | 分子名称: | Heme pas sensor protein, PROTOPORPHYRIN IX CONTAINING FE | | 著者 | Kurokawa, H, Lee, D.S, Watanabe, M, Sagami, I, Mikami, B, Raman, C.S, Shimizu, T. | | 登録日 | 2004-02-04 | | 公開日 | 2004-05-25 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (1.32 Å) | | 主引用文献 | A redox-controlled molecular switch revealed by the crystal structure of a bacterial heme PAS sensor.
J.Biol.Chem., 279, 2004
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1V9Z
 | | Crystal Structure of the heme PAS sensor domain of Ec DOS (Ferrous Form) | | 分子名称: | Heme pas sensor protein, PROTOPORPHYRIN IX CONTAINING FE | | 著者 | Kurokawa, H, Lee, D.S, Watanabe, M, Sagami, I, Mikami, B, Raman, C.S, Shimizu, T. | | 登録日 | 2004-02-04 | | 公開日 | 2004-05-25 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | A redox-controlled molecular switch revealed by the crystal structure of a bacterial heme PAS sensor.
J.Biol.Chem., 279, 2004
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4XLO
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7KEN
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5HK7
 | | Bacterial sodium channel pore, 2.95 Angstrom resolution | | 分子名称: | 2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}ethyl heptadecanoate, CHLORIDE ION, Ion transport protein, ... | | 著者 | Shaya, D, Findeisen, F, Rohaim, A, Minor, D.L. | | 登録日 | 2016-01-14 | | 公開日 | 2016-03-09 | | 最終更新日 | 2023-09-27 | | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | | 主引用文献 | Unfolding of a Temperature-Sensitive Domain Controls Voltage-Gated Channel Activation.
Cell, 164, 2016
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