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4EP7
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Functional implications from the Cid1 poly(U) polymerase crystal structure
分子名称: MAGNESIUM ION, Poly(A) RNA polymerase protein cid1, URIDINE 5'-TRIPHOSPHATE
著者Munoz-Tello, P, Gabus, C, Thore, S.
登録日2012-04-17
公開日2012-06-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2805 Å)
主引用文献Functional implications from the cid1 poly(u) polymerase crystal structure.
Structure, 20, 2012
4UD4
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Structural Plasticity of Cid1 Provides a Basis for its RNA Terminal Uridylyl Transferase Activity
分子名称: GLYCEROL, POLY(A) RNA POLYMERASE PROTEIN CID1
著者Yates, L.A, Durrant, B.P, Fleurdepine, S, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
登録日2014-12-07
公開日2015-03-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural plasticity of Cid1 provides a basis for its distributive RNA terminal uridylyl transferase activity.
Nucleic Acids Res., 43, 2015
4UD5
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Structural Plasticity of Cid1 Provides a Basis for its RNA Terminal Uridylyl Transferase Activity
分子名称: POLY(A) RNA POLYMERASE PROTEIN CID1
著者Yates, L.A, Durrant, B.P, Fleurdepine, S, Harlos, K, Norbury, C.J, Gilbert, R.J.C.
登録日2014-12-07
公開日2015-03-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structural Plasticity of Cid1 Provides a Basis for its Distributive RNA Terminal Uridylyl Transferase Activity.
Nucleic Acids Res., 43, 2015
4NKU
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Structure of Cid1 in complex with its short product ApU
分子名称: 5'-R(*AP*U)-3', BROMIDE ION, MAGNESIUM ION, ...
著者Munoz-Tello, P, Gabus, C, Thore, S.
登録日2013-11-13
公開日2013-12-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献A critical switch in the enzymatic properties of the Cid1 protein deciphered from its product-bound crystal structure.
Nucleic Acids Res., 42, 2014
4NKT
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Structure of Cid1 in complex with the UTP analog UMPNPP
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, BROMIDE ION, MAGNESIUM ION, ...
著者Munoz-Tello, P, Gabus, C, Thore, S.
登録日2013-11-13
公開日2013-12-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A critical switch in the enzymatic properties of the Cid1 protein deciphered from its product-bound crystal structure.
Nucleic Acids Res., 42, 2014
4FH3
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Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity
分子名称: Poly(A) RNA polymerase protein cid1
著者Lunde, B.M, Magler, I, Meinhart, A.
登録日2012-06-05
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity.
Nucleic Acids Res., 40, 2012
4FHW
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Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity - MgGTP bound
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Poly(A) RNA polymerase protein cid1
著者Lunde, B.M, Magler, I, Meinhart, A.
登録日2012-06-06
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity.
Nucleic Acids Res., 40, 2012
4FHX
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Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity - H336N mutant bound to MgATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Poly(A) RNA polymerase protein cid1
著者Lunde, B.M, Magler, I, Meinhart, A.
登録日2012-06-07
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity.
Nucleic Acids Res., 40, 2012
4FHV
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Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity - MgCTP bound
分子名称: CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Poly(A) RNA polymerase protein cid1
著者Lunde, B.M, Magler, I, Meinhart, A.
登録日2012-06-06
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity.
Nucleic Acids Res., 40, 2012
4FH5
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Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity - MgUTP bound
分子名称: MAGNESIUM ION, Poly(A) RNA polymerase protein cid1, URIDINE 5'-TRIPHOSPHATE
著者Lunde, B.M, Magler, I, Meinhart, A.
登録日2012-06-05
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity.
Nucleic Acids Res., 40, 2012
4FHY
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Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity - Mg 3'-dATP bound
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Poly(A) RNA polymerase protein cid1
著者Lunde, B.M, Magler, I, Meinhart, A.
登録日2012-06-07
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity.
Nucleic Acids Res., 40, 2012
4FHP
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Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity - CaUTP bound
分子名称: CALCIUM ION, GLYCEROL, Poly(A) RNA polymerase protein cid1, ...
著者Lunde, B.M, Magler, I, Meinhart, A.
登録日2012-06-06
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity.
Nucleic Acids Res., 40, 2012
3ED1
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Crystal Structure of Rice GID1 complexed with GA3
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GIBBERELLIN A3, Gibberellin receptor GID1, ...
著者Shimada, A, Nakatsu, T, Ueguchi-Tanaka, M, Kato, H, Matsuoka, M.
登録日2008-09-02
公開日2008-11-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for gibberellin recognition by its receptor GID1.
Nature, 456, 2008
3EBL
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Crystal Structure of Rice GID1 complexed with GA4
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GIBBERELLIN A4, Gibberellin receptor GID1, ...
著者Shimada, A, Nakatsu, T, Ueguchi-Tanaka, M, Kato, H, Matsuoka, M.
登録日2008-08-28
公開日2008-11-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for gibberellin recognition by its receptor GID1.
Nature, 456, 2008
8XBS
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C. elegans apo-SID1 structure
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gong, D.S.
登録日2023-12-07
公開日2024-06-05
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Structural basis for double-stranded RNA recognition by SID1.
Nucleic Acids Res., 52, 2024
8XC1
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C. elegans SID1 in complex with dsRNA
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gong, D.S.
登録日2023-12-07
公開日2024-06-05
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Structural basis for double-stranded RNA recognition by SID1.
Nucleic Acids Res., 52, 2024
2JRZ
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Solution structure of the Bright/ARID domain from the human JARID1C protein.
分子名称: Histone demethylase JARID1C
著者Koehler, C, Bishop, S, Dowler, E.F, Diehl, A, Schmieder, P, Leidert, M, Sundstrom, M, Arrowsmith, C.H, Wiegelt, J, Edwards, A, Oschkinat, H, Ball, L.J, Structural Genomics Consortium (SGC)
登録日2007-06-29
公開日2007-07-10
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Backbone and sidechain 1H, 13C and 15N resonance assignments of the Bright/ARID domain from the human JARID1C (SMCX) protein.
Biomol.Nmr Assign., 2, 2008
4XOH
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Mechanistic insights into anchorage of the contractile ring from yeast to humans
分子名称: Division mal foutue 1 protein
著者Chen, Z, Wu, J.-Q, Wang, J, Guan, R, Sun, L, Lee, I.-J, Liu, Y, Chen, M.
登録日2015-01-16
公開日2015-07-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Mechanistic insights into the anchorage of the contractile ring by anillin and mid1
Dev.Cell, 33, 2015
5FPL
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Crystal structure of human JARID1B in complex with CCT363901
分子名称: 1,2-ETHANEDIOL, 8-[4-(2-azanylethyl)pyrazol-1-yl]-3H-pyrido[3,4-d]pyrimidin-4-one, DIMETHYL SULFOXIDE, ...
著者Srikannathasan, V, Yann-Vai, L.B, Nowak, R, Johansson, C, Gileadi, C, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A, Brennan, P, Huber, K, Oppermann, U.
登録日2015-12-02
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献8-Substituted Pyrido[3,4-D]Pyrimidin-4(3H)-One Derivatives as Potent, Cell Permeable, Kdm4 (Jmjd2) and Kdm5 (Jarid1) Histone Lysine Demethylase Inhibitors.
J.Med.Chem., 59, 2016
7WUG
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GID subcomplex: Gid12 bound Substrate Receptor Scaffolding module
分子名称: Glucose-induced degradation protein 8, HLJ1_G0042170.mRNA.1.CDS.1, Vacuolar import and degradation protein 24, ...
著者Qiao, S, Cheng, J.D, Schulman, B.A.
登録日2022-02-08
公開日2022-06-08
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structures of Gid12-bound GID E3 reveal steric blockade as a mechanism inhibiting substrate ubiquitylation.
Nat Commun, 13, 2022
7VGW
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Yeast gid10 with Pro-peptide
分子名称: BJ4_G0041530.mRNA.1.CDS.1
著者Shin, J.S, Park, S.H, Kim, L, Heo, J, Song, H.K.
登録日2021-09-19
公開日2022-07-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of yeast Gid10 in complex with Pro/N-degron.
Biochem.Biophys.Res.Commun., 582, 2021
7Y63
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ApoSIDT2-pH7.4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SID1 transmembrane family member 2, ...
著者Gong, D.S.
登録日2022-06-18
公開日2023-06-21
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Structural insight into the human SID1 transmembrane family member 2 reveals its lipid hydrolytic activity.
Nat Commun, 14, 2023
7Y68
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SIDT2-pH5.5 plus miRNA
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SID1 transmembrane family member 2, ...
著者Gong, D.S.
登録日2022-06-18
公開日2023-06-21
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Structural insight into the human SID1 transmembrane family member 2 reveals its lipid hydrolytic activity.
Nat Commun, 14, 2023
7Y69
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ApoSIDT2-pH5.5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SID1 transmembrane family member 2, ...
著者Gong, D.S.
登録日2022-06-18
公開日2023-06-21
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Structural insight into the human SID1 transmembrane family member 2 reveals its lipid hydrolytic activity.
Nat Commun, 14, 2023
5IM8
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Solution Structure of the Microtubule-Targeting COS Domain of MID1
分子名称: E3 ubiquitin-protein ligase Midline-1
著者Wright, K.M, Du, H, Dagnachew, M, Massiah, M.A.
登録日2016-03-05
公開日2016-07-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the microtubule-targeting COS domain of MID1.
Febs J., 283, 2016

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