PDB: 10962 件ウェブページステータス検索Chemie searchBIRD

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2N41	Solution NMR Structure of DE NOVO DESIGNED PROTEIN Top7NNSTYCC, Northeast Structural Genomics Consortium (NESG) Target OR34 分子名称: OR34 著者 Liu, G, Chan, K, Basanta, B, Xiao, R, Janjua, H, Kogan, S, Maglaqui, M, Ciccosanti, C, Acton, T.B, Kornhaber, G, Everett, J.K, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2015-06-16 公開日 2016-03-02 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution NMR Structure of DE NOVO DESIGNED PROTEIN Top7NNSTYCC, Northeast Structural Genomics Consortium (NESG) Target OR34 To be Published
2FN9	Thermotoga maritima Ribose Binding Protein Unliganded Form 分子名称: ribose ABC transporter, periplasmic ribose-binding protein 著者 Cuneo, M.J, Changela, A, Tian, Y, Beese, L.S, Hellinga, H.W. 登録日 2006-01-10 公開日 2007-01-16 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Ligand-induced conformational changes in a thermophilic ribose-binding protein. Bmc Struct.Biol., 8, 2008
2FN8	Thermotoga maritima Ribose Binding Protein Ribose Bound Form 分子名称: beta-D-ribopyranose, ribose ABC transporter, periplasmic ribose-binding protein 著者 Cuneo, M.J, Changela, A. 登録日 2006-01-10 公開日 2007-01-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Ligand-induced conformational changes in a thermophilic ribose-binding protein. Bmc Struct.Biol., 8, 2008
3V10	Crystal structure of the collagen binding domain of Erysipelothrix rhusiopathiae surface protein RspB 分子名称: Rhusiopathiae surface protein B 著者 Ponnuraj, K, Swarmistha devi, A, Ogawa, Y, Shimoji, Y, Subramainan, B. 登録日 2011-12-09 公開日 2012-10-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Collagen adhesin-nanoparticle interaction impairs adhesin's ligand binding mechanism Biochim.Biophys.Acta, 1820, 2012
6DXQ	Crystal structure of the LigJ Hydratase product complex with 4-carboxy-4-hydroxy-2-oxoadipate 分子名称: (2S)-2-hydroxy-4-oxobutane-1,2,4-tricarboxylic acid, 4-oxalomesaconate hydratase, ZINC ION 著者 Mabanglo, M.F, Raushel, F.M. 登録日 2018-06-29 公開日 2018-09-26 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Structure and Reaction Mechanism of the LigJ Hydratase: An Enzyme Critical for the Bacterial Degradation of Lignin in the Protocatechuate 4,5-Cleavage Pathway. Biochemistry, 57, 2018
3VG3	Cadmium derivative of human LFABP 分子名称: CADMIUM ION, Fatty acid-binding protein, liver, ... 著者 Sharma, A, Yogavel, M, Sharma, A. 登録日 2011-08-03 公開日 2012-06-20 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Utility of anion and cation combinations for phasing of protein structures. J.Struct.Funct.Genom., 13, 2012
3VG7	Structure of human LFABP at high resolution from S-SAD 分子名称: Fatty acid-binding protein, liver, PALMITIC ACID 著者 Sharma, A, Yogavel, M, Sharma, A. 登録日 2011-08-03 公開日 2012-08-01 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 Utility of anion and cation combinations for phasing of protein structures. J.Struct.Funct.Genom., 13, 2012
3W20	Crystal Structure of a Novel N-Substituted L-Amino Acid Dioxygenase from Burkholderia ambifaria AMMD 分子名称: Putative uncharacterized protein, ZINC ION 著者 Qin, H.M, Miyakawa, T, Jia, M.Z, Nakamura, A, Ohtsuka, J, Xue, Y.L, Kawashima, T, Kasahara, T, Hibi, M, Ogawa, J, Tanokura, M. 登録日 2012-11-26 公開日 2013-07-17 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Crystal Structure of a Novel N-Substituted L-Amino Acid Dioxygenase from Burkholderia ambifaria AMMD Plos One, 8, 2013
3VJ7	Crystal structure of the carboxy-terminal ribonuclease domain of Colicin E5 R33Q mutant 分子名称: 2'-DEOXYURIDINE 3'-MONOPHOSPHATE, 2-AMINO-9-(2-DEOXY-3-O-PHOSPHONOPENTOFURANOSYL)-1,9-DIHYDRO-6H-PURIN-6-ONE, Colicin-E5 著者 Yajima, S, Inoue, S, Fushinobu, S, Ogawa, T, Hidaka, M, Masaki, H. 登録日 2011-10-13 公開日 2011-11-02 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Identification of the catalytic residues of sequence-specific and histidine-free ribonuclease colicin E5 J.Biochem., 152, 2012
3VG4	Cadmium derivative of human LFABP 分子名称: CADMIUM ION, Fatty acid-binding protein, liver, ... 著者 Sharma, A, Yogavel, M, Sharma, A. 登録日 2011-08-03 公開日 2012-06-20 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Utility of anion and cation combinations for phasing of protein structures. J.Struct.Funct.Genom., 13, 2012
3VHQ	Crystal structure of the Ca6 site mutant of Pro-SA-subtilisin 分子名称: CALCIUM ION, Tk-subtilisin 著者 Uehara, R, Takeuchi, Y, Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. 登録日 2011-09-01 公開日 2012-07-11 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Requirement of Ca(2+) Ions for the Hyperthermostability of Tk-Subtilisin from Thermococcus kodakarensis Biochemistry, 51, 2012
3RT7	Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima in complex with ADP-glucose 分子名称: ADENOSINE-5'-DIPHOSPHATE-GLUCOSE, GLYCEROL, MAGNESIUM ION, ... 著者 Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W. 登録日 2011-05-03 公開日 2011-06-22 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Identification of unknown protein function using metabolite cocktail screening. Structure, 20, 2012
3VV6	Crystal Structure of beta secetase in complex with 2-amino-3-methyl-6-((1S, 2R)-2-phenylcyclopropyl)pyrimidin-4(3H)-one 分子名称: 2-amino-3-methyl-6-[(1S,2R)-2-phenylcyclopropyl]pyrimidin-4(3H)-one, Beta-secretase 1, GLYCEROL, ... 著者 Yonezawa, S, Yamamoto, T, Yamakawa, H, Muto, C, Hosono, M, Hattori, K, Higashino, K, Sakagami, M, Togame, H, Tanaka, Y, Nakano, T, Takemoto, H, Arisawa, M, Shuto, S. 登録日 2012-07-17 公開日 2012-10-24 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Conformational restriction approach to beta-secretase (BACE1) inhibitors: effect of a cyclopropane ring to induce an alternative binding mode J.Med.Chem., 55, 2012
3RS8	Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima in complex with ADP-ribose 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, GLYCEROL, MAGNESIUM ION, ... 著者 Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W. 登録日 2011-05-02 公開日 2011-06-22 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Identification of unknown protein function using metabolite cocktail screening. Structure, 20, 2012
3VG6	Barium derivative of human LFABP 分子名称: BARIUM ION, Fatty acid-binding protein, liver, ... 著者 Sharma, A, Yogavel, M, Sharma, A. 登録日 2011-08-03 公開日 2012-06-20 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Utility of anion and cation combinations for phasing of protein structures. J.Struct.Funct.Genom., 13, 2012
3VGJ	Crystal of Plasmodium falciparum tyrosyl-tRNA synthetase (PfTyrRS)in complex with adenylate analog 分子名称: ADENOSINE MONOPHOSPHATE, TYROSINE, Tyrosyl-tRNA synthetase, ... 著者 Banday, M.M, Yogavel, M, Bhatt, T.K, Khan, S, Sharma, A, Sharma, A. 登録日 2011-08-14 公開日 2012-07-25 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.212 Å) 主引用文献 Malaria parasite tyrosyl-tRNA synthetase secretion triggers pro-inflammatory responses. Nat Commun, 2, 2011
3VV2	Crystal structure of complex form between S324A-subtilisin and mutant Tkpro 分子名称: CALCIUM ION, CHLORIDE ION, PROPEPTIDE from Tk-subtilisin, ... 著者 Uehara, R, Ueda, Y, You, D.J, Takano, K, Koga, Y, Kanaya, S. 登録日 2012-07-12 公開日 2013-03-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Accelerated maturation of Tk-subtilisin by a Leu Pro mutation at the C-terminus of the propeptide, which reduces the binding of the propeptide to Tk-subtilisin Febs J., 280, 2013
3W21	Crystal Structure of a Novel N-Substituted L-Amino Acid Dioxygenase in complex with alpha-KG from Burkholderia ambifaria AMMD 分子名称: 2-OXOGLUTARIC ACID, Putative uncharacterized protein, ZINC ION 著者 Qin, H.M, Miyakawa, T, Jia, M.Z, Nakamura, A, Ohtsuka, J, Xue, Y.L, Kawashima, T, Kasahara, T, Hibi, M, Ogawa, J, Tanokura, M. 登録日 2012-11-26 公開日 2013-07-17 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Crystal Structure of a Novel N-Substituted L-Amino Acid Dioxygenase from Burkholderia ambifaria AMMD Plos One, 8, 2013
3VV8	Crystal structure of beta secetase in complex with 2-amino-3-methyl-6-((1S,2R)-2-(3'-methylbiphenyl-4-yl)cyclopropyl)pyrimidin-4(3H)-one 分子名称: 2-amino-3-methyl-6-[(1S,2R)-2-(3'-methylbiphenyl-4-yl)cyclopropyl]pyrimidin-4(3H)-one, Beta-secretase 1, GLYCEROL 著者 Yonezawa, S, Yamamoto, T, Yamakawa, H, Muto, C, Hosono, M, Hattori, K, Higashino, K, Sakagami, M, Togame, H, Tanaka, Y, Nakano, T, Takemoto, H, Arisawa, M, Shuto, S. 登録日 2012-07-17 公開日 2012-10-24 最終更新日 2013-09-04 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Conformational restriction approach to beta-secretase (BACE1) inhibitors: effect of a cyclopropane ring to induce an alternative binding mode. J.Med.Chem., 55, 2012
3VX7	Crystal structure of Kluyveromyces marxianus Atg7NTD-Atg10 complex 分子名称: E1, E2 著者 Yamaguchi, M, Matoba, K, Sawada, R, Fujioka, Y, Nakatogawa, H, Yamamoto, H, Kobashigawa, Y, Hoshida, H, Akada, R, Ohsumi, Y, Noda, N.N, Inagaki, F. 登録日 2012-09-11 公開日 2012-11-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Noncanonical recognition and UBL loading of distinct E2s by autophagy-essential Atg7. Nat.Struct.Mol.Biol., 19, 2012
3VG2	Iodide derivative of human LFABP 分子名称: Fatty acid-binding protein, liver, IODIDE ION, ... 著者 Sharma, A, Yogavel, M, Sharma, A. 登録日 2011-08-03 公開日 2012-06-20 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Utility of anion and cation combinations for phasing of protein structures. J.Struct.Funct.Genom., 13, 2012
3VG5	Barium derivative of human LFABP 分子名称: BARIUM ION, Fatty acid-binding protein, liver, ... 著者 Sharma, A, Yogavel, M, Sharma, A. 登録日 2011-08-03 公開日 2012-06-20 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Utility of anion and cation combinations for phasing of protein structures. J.Struct.Funct.Genom., 13, 2012
3VX6	Crystal structure of Kluyveromyces marxianus Atg7NTD 分子名称: E1 著者 Yamaguchi, M, Matoba, K, Sawada, R, Fujioka, Y, Nakatogawa, H, Yamamoto, H, Kobashigawa, Y, Hoshida, H, Akada, R, Ohsumi, Y, Noda, N.N, Inagaki, F. 登録日 2012-09-11 公開日 2012-11-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Noncanonical recognition and UBL loading of distinct E2s by autophagy-essential Atg7. Nat.Struct.Mol.Biol., 19, 2012
3VN5	Crystal structure of Aquifex aeolicus RNase H3 分子名称: Ribonuclease HIII 著者 Jongruja, N, You, D.J, Eiko, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. 登録日 2011-12-22 公開日 2012-12-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Structure and characterization of RNase H3 from Aquifex aeolicus Febs J., 279, 2012
3W0D	Structure of elastase inhibitor AFUEI (cyrstal form I) 分子名称: Elastase inhibitor AFUEI 著者 Imada, K, Sakuma, M, Okumura, Y, Ogawa, K, Nikai, T, Homma, M. 登録日 2012-10-29 公開日 2013-05-15 最終更新日 2013-07-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 X-ray Structure Analysis and Characterization of AFUEI, an Elastase Inhibitor from Aspergillus fumigatus J.Biol.Chem., 288, 2013

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