PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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9FI6	Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) mutant Y91F+Y298F in complex with tetramannuronic acid at pH 3.5 分子名称: Alginate lyase family protein, SULFATE ION, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid 著者 Tandrup, T, Wilkens, C. 登録日 2024-05-28 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 The Swiss Army Knife of Alginate Metabolism: Mechanistic Analysis of a Mixed-Function Polysaccharide Lyase/Epimerase of the Human Gut Microbiota. J.Am.Chem.Soc., 2025
6RTM	Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1-[(dimethylamino)methyl]-2-naphthol at 2 hour of soaking 分子名称: 1-methylidenenaphthalen-2-one, FLAVIN-ADENINE DINUCLEOTIDE, POTASSIUM ION, ... 著者 Angelucci, F, Silvestri, I, Fata, F, Williams, D.L. 登録日 2019-05-24 公開日 2020-01-08 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Ectopic suicide inhibition of thioredoxin glutathione reductase. Free Radic Biol Med, 147, 2020
3QD8	Crystal structure of Mycobacterium tuberculosis BfrB 分子名称: Probable bacterioferritin BfrB 著者 Khare, G, Gupta, V, Nangpal, P, Gupta, R.K, Sauter, N.K, Tyagi, A.K. 登録日 2011-01-18 公開日 2011-04-27 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Ferritin Structure from Mycobacterium tuberculosis: Comparative Study with Homologues Identifies Extended C-Terminus Involved in Ferroxidase Activity Plos One, 6, 2011
8DHX	Human liver ferritin 分子名称: Ferritin heavy chain 著者 Zhang, Z. 登録日 2022-06-28 公開日 2023-07-12 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.92 Å) 主引用文献 Human liver ferritin To Be Published
9QEL	Crystal structure of YTHDF2 in complex with compound 4 (AI-DF2-13) 分子名称: 6-(METHYLAMINO)-1H-PYRIMIDINE-2,4-DIONE, SULFATE ION, YTH domain-containing family protein 2 著者 Nai, F, Invernizzi, A, Caflisch, A. 登録日 2025-03-10 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Discovery of YTHDF2 Ligands by Fragment-Based Design Acs Bio Med Chem Au, 2025
8DKC	P. gingivalis RNA Polymerase 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Liu, B, Bu, F. 登録日 2022-07-05 公開日 2023-06-21 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Cryo-EM Structure of Porphyromonas gingivalis RNA Polymerase. J.Mol.Biol., 436, 2024
6JJ7	Crystal structure of OsHXK6-Glc complex 分子名称: Rice hexokinase 6, beta-D-glucopyranose 著者 He, C, Wei, P, Chen, J, Wang, H, Wan, Y, Zhou, J, Zhu, Y, Huang, W, Yin, L. 登録日 2019-02-25 公開日 2019-07-03 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Crystal structure of OsHXK6-Glc complex To Be Published
9GJ3	Structure of the amyloid-forming peptide LYIQNY 分子名称: Peptide LYIQNY 著者 Durvanger, Z. 登録日 2024-08-21 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Chemical Evolution of Early Macromolecules: From Prebiotic Oligopeptides to Self-Organizing Biosystems via Amyloid Formation. Chemistry, 31, 2025
9GX8	Crystal structure of CIM-2, a membrane-bound B1 metallo-beta-lactamase from Chryseobacterium indologenes 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ISOPROPYL ALCOHOL, ... 著者 Hinchliffe, P, Spencer, J. 登録日 2024-09-28 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Active site loops of membrane-anchored metallo-beta-lactamases from environmental bacteria determine cephalosporinase activity. Antimicrob.Agents Chemother., 2025
9GX9	Crystal structure of CJO-1, a membrane-bound B1 metallo-beta-lactamase from Chryseobacterium joostei 分子名称: GLYCEROL, Metallo-beta-lactamase type 2, ZINC ION 著者 Hinchliffe, P, Spencer, J. 登録日 2024-09-28 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Active site loops of membrane-anchored metallo-beta-lactamases from environmental bacteria determine cephalosporinase activity. Antimicrob.Agents Chemother., 2025
9HDG	The structure of the catalytic domain of AfAA11B from the filamentous fungus Aspergillus fumigatus 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AA11 family lytic polysaccharide monooxygenase B, ASCORBIC ACID, ... 著者 Hall, K, Roennekleiv, S.E, Gautieri, A, Skaali, R, Rieder, L, Englund, A.N, Landsem, E, Emrich-Mills, T, Ayuso-Fernandez, I, Golten, O, Kjendseth, A.R, Soerlie, M, Eijsink, V.G.H. 登録日 2024-11-12 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 Structure-Function Analysis of an Understudied Type of LPMO with Unique Redox Properties and Substrate Specificity. Acs Catalysis, 15, 2025
9HGD	Crystal structure of human GABARAP in complex with cyclic peptide GAB_D23 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ... 著者 Ueffing, A, Wilms, J.A, Willbold, D, Weiergraeber, O.H. 登録日 2024-11-19 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Accurate de novo design of high-affinity protein-binding macrocycles using deep learning. Nat.Chem.Biol., 2025
9HGC	Crystal structure of human GABARAPL1 in complex with cyclic peptide GAB_D8 分子名称: GAB_D8, GLYCEROL, Gamma-aminobutyric acid receptor-associated protein-like 1, ... 著者 Wilms, J.A, Willbold, D, Weiergraeber, O.H. 登録日 2024-11-19 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Accurate de novo design of high-affinity protein-binding macrocycles using deep learning. Nat.Chem.Biol., 2025
8DGS	Cryo-EM structure of a RAS/RAF complex (state 1) 分子名称: 14-3-3 protein zeta, 5-[(2-fluoro-4-iodophenyl)amino]-N-(2-hydroxyethoxy)imidazo[1,5-a]pyridine-6-carboxamide, Dual specificity mitogen-activated protein kinase kinase 1, ... 著者 Eck, M.J, Jeon, H, Park, E, Rawson, S. 登録日 2022-06-24 公開日 2023-07-05 最終更新日 2025-05-14 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Cryo-EM structure of a RAS/RAF recruitment complex. Nat Commun, 14, 2023
9HPF	The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3- TARP gamma2 in the desensitised state. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Isoform Flip of Glutamate receptor 3,Voltage-dependent calcium channel gamma-2 subunit 著者 Pokharna, A, Krieger, J, Greger, I. 登録日 2024-12-12 公開日 2025-07-09 実験手法 ELECTRON MICROSCOPY (3.77 Å) 主引用文献 The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3- TARP gamma2 in the apo state. To Be Published
1IVN	E.coli Thioesterase I/Protease I/Lysophospholiase L1 分子名称: GLYCEROL, SULFATE ION, Thioesterase I 著者 Lo, Y.-C, Shaw, J.-F, Liaw, Y.-C. 登録日 2002-03-27 公開日 2003-07-08 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of Escherichia coli Thioesterase I/Protease I/Lysophospholipase L1: Consensus Sequence Blocks Constitute the Catalytic Center of SGNH-hydrolases through a Conserved Hydrogen Bond Network J.Mol.Biol., 330, 2003
5A7T	Crystal structure of Sulfolobus acidocaldarius Trm10 at 2.4 angstrom resolution. 分子名称: DI(HYDROXYETHYL)ETHER, TRNA (ADENINE(9)-N1)-METHYLTRANSFERASE 著者 Van Laer, B, Roovers, M, Wauters, L, Kasprzak, J, Dyzma, M, Deyaert, E, Feller, A, Bujnicki, J, Droogmans, L, Versees, W. 登録日 2015-07-09 公開日 2016-01-13 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural and Functional Insights Into tRNA Binding and Adenosine N1-Methylation by an Archaeal Trm10 Homologue. Nucleic Acids Res., 44, 2016
8DGT	Cryo-EM structure of a RAS/RAF complex (state 2) 分子名称: 14-3-3 protein zeta, 5-[(2-fluoro-4-iodophenyl)amino]-N-(2-hydroxyethoxy)imidazo[1,5-a]pyridine-6-carboxamide, Dual specificity mitogen-activated protein kinase kinase 1, ... 著者 Eck, M.J, Jeon, H, Park, E, Rawson, S. 登録日 2022-06-24 公開日 2023-07-05 最終更新日 2025-05-14 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Cryo-EM structure of a RAS/RAF recruitment complex. Nat Commun, 14, 2023
9IME	Pilin PilA from Burkholderia thailandensis with bromide ions 分子名称: BROMIDE ION, GLYCEROL, Pilin (Bacterial filament) subfamily, ... 著者 Lotangchanintra, T, Wawrzak, Z, Wangkanont, K. 登録日 2024-07-03 公開日 2025-07-09 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Pilin PilA from Burkholderia thailandensis with bromide ions To Be Published
4JIR	Crystal Structure Of Aldose Reductase (AKR1B1) Complexed With NADP+ And Epalrestat 分子名称: Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION, ... 著者 Zhang, L, Zheng, X, Zhang, H, Zhao, Y, Chen, K, Zhai, J, Hu, X. 登録日 2013-03-06 公開日 2013-10-23 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Inhibitor selectivity between aldo-keto reductase superfamily members AKR1B10 and AKR1B1: Role of Trp112 (Trp111). Febs Lett., 587, 2013
1R5U	RNA POLYMERASE II TFIIB COMPLEX 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, ... 著者 Bushnell, D.A, Westover, K.D, Davis, R, Kornberg, R.D. 登録日 2003-10-13 公開日 2004-02-17 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms. Science, 303, 2004
6UTL	Yeast Thiol Specific antoxidant 2 with C171S mutation and catalytic cysteine alkylated with iodoacetamide 分子名称: Peroxiredoxin TSA2 著者 Tairum, C.A, Bannitz-Fernandes, R, Tonoli, C.C.C, Murakami, M.T, de Oliveira, M.A, Netto, L.E.S. 登録日 2019-10-29 公開日 2020-07-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Reduction of sulfenic acids by ascorbate in proteins, connecting thiol-dependent to alternative redox pathways. Free Radic Biol Med, 156, 2020
1RGK	RNASE T1 MUTANT GLU46GLN BINDS THE INHIBITORS 2'GMP AND 2'AMP AT THE 3' SUBSITE 分子名称: ADENOSINE-2'-MONOPHOSPHATE, CALCIUM ION, RIBONUCLEASE T1 著者 Granzin, J, Puras-Lutzke, R, Landt, O, Grunert, H.-P, Heinemann, U, Saenger, W, Hahn, U. 登録日 1992-02-19 公開日 1993-01-15 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 RNase T1 mutant Glu46Gln binds the inhibitors 2'GMP and 2'AMP at the 3' subsite. J.Mol.Biol., 225, 1992
2E68	Crystal structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with dihydroorotate 分子名称: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, COBALT HEXAMMINE(III), Dihydroorotate dehydrogenase, ... 著者 Inaoka, D.K, Shimizu, H, Sakamoto, K, Shiba, T, Kurisu, G, Nara, T, Aoki, T, Harada, S, Kita, K. 登録日 2006-12-26 公開日 2008-01-15 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Crystal structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with dihydroorotate To be Published
9JC1	Engineering of ATP synthase 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP synthase delta subunit,ATP synthase subunit alpha,ATP synthase subunit alpha, ATP synthase epsilon chain, ... 著者 Hamaguchi-Suzuki, N, Ueno, H, Yasuda, K, Marui, R, Adachi, N, Senda, T, Noji, H, Murata, T. 登録日 2024-08-28 公開日 2025-07-09 実験手法 ELECTRON MICROSCOPY (2.79 Å) 主引用文献 Engineering of ATP synthase for enhancement of proton-to-ATP ratio Nat Commun, 2025

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