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6HHY
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BU of 6hhy by Molmil
Klebsiella pneumoniae Seryl-tRNA Synthetase in Complex with 5'-O-(N-(L-seryl)-sulfamoyl)N3-methyluridine
分子名称: 1,2-ETHANEDIOL, 5'-O-(N-(L-seryl)-sulfamoyl)N3-methyluridine, CALCIUM ION, ...
著者Pang, L, De Graef, S, Weeks, S.D, Strelkov, S.V.
登録日2018-08-29
公開日2019-12-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structural Insights into the Binding of Natural Pyrimidine-Based Inhibitors of Class II Aminoacyl-tRNA Synthetases.
Acs Chem.Biol., 15, 2020
7BE1
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BU of 7be1 by Molmil
X-ray structure of Hen Egg White Lysozyme with dirhodium tetraacetate (3)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Lysozyme, ...
著者Loreto, D, Merlino, A, Ferraro, G.
登録日2020-12-22
公開日2021-02-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
Int J Mol Sci, 22, 2021
9D20
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BU of 9d20 by Molmil
Crystal structure of DLK1 in complex with ACVR2B
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Activin receptor type-2B, ...
著者Ming, Q, Antfolk, D, Luca, V.C.
登録日2024-08-08
公開日2025-05-07
最終更新日2025-07-16
実験手法X-RAY DIFFRACTION (2.673 Å)
主引用文献Molecular mechanism of Activin receptor inhibition by DLK1.
Nat Commun, 16, 2025
6Z52
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BU of 6z52 by Molmil
Crystal structure of CLK3 in complex with macrocycle ODS2003136
分子名称: 1,2-ETHANEDIOL, 11,15-dimethyl-6-(4-methylpiperazin-1-yl)-8-oxa-2,11,15,19,21,23-hexazatetracyclo[15.6.1.13,7.020,24]pentacosa-1(23),3(25),4,6,17,20(24),21-heptaen-10-one, CHLORIDE ION, ...
著者Chaikuad, A, Benderitter, P, Hoflack, J, Denis, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-05-26
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Crystal structure of CLK3 in complex with macrocycle ODS2003136
To Be Published
5HXA
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BU of 5hxa by Molmil
Crystal structure of an UDP-forming alpha, alpha-terhalose-phosphate synthase from Burkholderia xenovorans
分子名称: 1,2-ETHANEDIOL, Alpha,alpha-trehalose-phosphate synthase (UDP-forming), GLYCEROL, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2016-01-29
公開日2016-02-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of an UDP-forming alpha, alpha-terhalose-phosphate synthase from Burkholderia xenovorans
to be published
7V4Z
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BU of 7v4z by Molmil
Structure of Horcolin native form
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Bobbili, K.B, Sivaji, N, Jayaprakash, N.G, Narayanan, V, Sekhar, A, Suguna, K, Surolia, A.
登録日2021-08-16
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Structure and Carbohydrate Recognition by the Nonmitogenic Lectin Horcolin.
Biochemistry, 61, 2022
2XSL
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BU of 2xsl by Molmil
The crystal structure of a Thermus thermophilus tRNAGly acceptor stem microhelix at 1.6 Angstroem resolution
分子名称: 5'-R(*CP*UP*CP*CP*CP*GP*C)-3', 5'-R(*GP*CP*GP*GP*GP*AP*G)-3'
著者Oberthuer, D, Eichert, A, Erdmann, V.A, Fuerste, J.P, Betzel, C, Foerster, C.
登録日2010-10-29
公開日2011-08-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献The Crystal Structure of a Thermus Thermophilus tRNA(Gly) Acceptor Stem Microhelix at 1.6 A Resolution.
Biochem.Biophys.Res.Commun., 404, 2011
6I11
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BU of 6i11 by Molmil
CRYSTAL STRUCTURE OF FASCIN IN COMPLEX WITH COMPOUND 3
分子名称: ACETATE ION, Fascin, ~{N}-(1-methylpyrazol-4-yl)-1-oxidanylidene-2-(phenylmethyl)isoquinoline-4-carboxamide
著者Schuettelkopf, A.W.
登録日2018-10-27
公開日2019-02-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structure-based design, synthesis and biological evaluation of a novel series of isoquinolone and pyrazolo[4,3-c]pyridine inhibitors of fascin 1 as potential anti-metastatic agents.
Bioorg.Med.Chem.Lett., 29, 2019
5H86
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BU of 5h86 by Molmil
Human Gcn5 bound to butyryl-CoA
分子名称: 1,2-ETHANEDIOL, Butyryl Coenzyme A, Histone acetyltransferase KAT2A
著者Wolberger, C, Ringel, A.E.
登録日2015-12-23
公開日2016-03-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structural basis for acyl-group discrimination by human Gcn5L2.
Acta Crystallogr D Struct Biol, 72, 2016
6H94
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BU of 6h94 by Molmil
T16A variant of beta-phosphoglucomutase from Lactococcus lactis with phosphate and TRIS bound in an open conformer to 1.5 A.
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-phosphoglucomutase, ...
著者Robertson, A.J, Bisson, C, Waltho, J.P.
登録日2018-08-03
公開日2020-08-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Transition state of phospho-enzyme hydrolysis in beta-phosphoglucomutase.
To Be Published
5XNC
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BU of 5xnc by Molmil
Crystal structure of the branched-chain polyamine synthase (BpsA) in complex with N4-aminopropylspermidine and 5-methylthioadenosine
分子名称: 1,2-ETHANEDIOL, 5'-DEOXY-5'-METHYLTHIOADENOSINE, DI(HYDROXYETHYL)ETHER, ...
著者Mizohata, E, Tse, K.M, Fujita, J, Inoue, T.
登録日2017-05-22
公開日2018-08-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Active site geometry of a novel aminopropyltransferase for biosynthesis of hyperthermophile-specific branched-chain polyamine.
FEBS J., 284, 2017
4XJR
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BU of 4xjr by Molmil
The catalytic mechanism of human parainfluenza virus type 3 haemagglutinin-neuraminidase revealed
分子名称: (6R)-2,6-anhydro-3,4,5-trideoxy-6-[(2S)-2,3-dihydroxypropanoyl]-3-fluoro-5-[(2-methylpropanoyl)amino]-4-triaza-1,2-dien -2-ium-1-yl-L-gulonic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Dirr, L, El-Deeb, I, Guillon, P, Carroux, C, Chavas, L, von Itzstein, M.
登録日2015-01-08
公開日2015-02-11
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The catalytic mechanism of human parainfluenza virus type 3 haemagglutinin-neuraminidase revealed.
Angew.Chem.Int.Ed.Engl., 54, 2015
5CQR
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BU of 5cqr by Molmil
Dimerization of Elp1 is essential for Elongator complex assembly
分子名称: Elongator complex protein 1
著者Lin, Z, Xu, H, Li, F, Diao, W, Long, J, Shen, Y.
登録日2015-07-22
公開日2015-08-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.015 Å)
主引用文献Dimerization of elongator protein 1 is essential for Elongator complex assembly.
Proc.Natl.Acad.Sci.USA, 112, 2015
5M2V
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BU of 5m2v by Molmil
Structure of GluK1 ligand-binding domain (S1S2) in complex with (2S,4R)-4-(2-carboxyphenoxy)pyrrolidine-2-carboxylic acid at 3.18 A resolution
分子名称: (2~{S},4~{R})-4-(2-carboxyphenoxy)pyrrolidine-2-carboxylic acid, CHLORIDE ION, Glutamate receptor ionotropic, ...
著者Frydenvang, K, Kastrup, J.S, Kristensen, C.M.
登録日2016-10-13
公開日2017-01-11
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Design and Synthesis of a Series of l-trans-4-Substituted Prolines as Selective Antagonists for the Ionotropic Glutamate Receptors Including Functional and X-ray Crystallographic Studies of New Subtype Selective Kainic Acid Receptor Subtype 1 (GluK1) Antagonist (2S,4R)-4-(2-Carboxyphenoxy)pyrrolidine-2-carboxylic Acid.
J. Med. Chem., 60, 2017
6RAA
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BU of 6raa by Molmil
CLK1 Kinase domain with bound imidazopyridin inhibitor TP003
分子名称: 1,2-ETHANEDIOL, 4-[2-methyl-1-(4-methylpiperazin-1-yl)-1-oxidanylidene-propan-2-yl]-~{N}-(6-pyridin-4-ylimidazo[1,2-a]pyridin-2-yl)benzamide, Dual specificity protein kinase CLK1
著者Schroeder, M, Arrowsmith, C, Knapp, S, Bountra, C, Edwards, A, Structural Genomics Consortium (SGC)
登録日2019-04-05
公開日2019-04-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献CLK1 Kinase domain with bound imidazopyridin inhibitor TP003
To Be Published
7BBX
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BU of 7bbx by Molmil
Neisseria gonorrhoeae transaldolase, variant K8A
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, Transaldolase
著者Rabe von Pappenheim, F, Wensien, M, Funk, L.M, Tittmann, K.
登録日2020-12-18
公開日2021-03-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献A lysine-cysteine redox switch with an NOS bridge regulates enzyme function.
Nature, 593, 2021
7NM0
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BU of 7nm0 by Molmil
Crystal structure of Mycobacterium tuberculosis ArgB in complex with 1-(2,6-dihydroxyphenyl)ethan-1-one.
分子名称: 1,2-ETHANEDIOL, 1-[2,6-bis(oxidanyl)phenyl]ethanone, Acetylglutamate kinase, ...
著者Mendes, V, Thomas, S.E, Cory-Wright, J, Blundell, T.L.
登録日2021-02-23
公開日2021-06-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.281 Å)
主引用文献A fragment-based approach to assess the ligandability of ArgB, ArgC, ArgD and ArgF in the L-arginine biosynthetic pathway of Mycobacterium tuberculosis
Comput Struct Biotechnol J, 19, 2021
6R50
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BU of 6r50 by Molmil
Crystal structure of holo PPEP-1(E143A/Y178F) in complex with substrate peptide Ac-EVNAPVP-CONH2
分子名称: ACE-GLU-VAL-ASN-ALA-PRO-VAL-LPD, Pro-Pro endopeptidase, ZINC ION
著者Pichlo, C, Baumann, U.
登録日2019-03-24
公開日2019-06-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.807 Å)
主引用文献Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
7NLU
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BU of 7nlu by Molmil
Crystal structure of Mycobacterium tuberculosis ArgB in complex with 1-(1H-indol-3-yl)ethan-1-one
分子名称: 1-(1~{H}-indol-3-yl)ethanone, Acetylglutamate kinase, SULFATE ION
著者Mendes, V, Thomas, S.E, Cory-Wright, J, Blundell, T.L.
登録日2021-02-22
公開日2021-06-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.235 Å)
主引用文献A fragment-based approach to assess the ligandability of ArgB, ArgC, ArgD and ArgF in the L-arginine biosynthetic pathway of Mycobacterium tuberculosis
Comput Struct Biotechnol J, 19, 2021
7TZU
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BU of 7tzu by Molmil
Crystal structure of the E. coli thiM riboswitch bound to 1-(4-(piperazin-1-yl)pyridin-3-yl)-N-(quinoxalin-6-ylmethyl)methanamine (linked compound 38)
分子名称: 1-[4-(piperazin-1-yl)pyridin-3-yl]-N-[(quinoxalin-6-yl)methyl]methanamine, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Nuthanakanti, A, Serganov, A.
登録日2022-02-16
公開日2022-05-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献SHAPE-enabled fragment-based ligand discovery for RNA.
Proc.Natl.Acad.Sci.USA, 119, 2022
8B5D
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BU of 8b5d by Molmil
Exploring the ligand binding and conformational dynamics of receptor domain 1 of the ABC transporter GlnPQ
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ABC transporter permease subunit, DI(HYDROXYETHYL)ETHER, ...
著者Whittaker, J, Guskov, A.
登録日2022-09-22
公開日2023-10-04
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Exploring the Ligand Binding and Conformational Dynamics of the Substrate-Binding Domain 1 of the ABC Transporter GlnPQ.
J.Phys.Chem.B, 128, 2024
8B5E
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BU of 8b5e by Molmil
Exploring the ligand binding and conformational dynamics of receptor domain 1 of the ABC transporter GlnPQ
分子名称: ABC transporter permease subunit, ARGININE, DI(HYDROXYETHYL)ETHER, ...
著者Whittaker, J, Guskov, A.
登録日2022-09-22
公開日2023-10-04
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Exploring the Ligand Binding and Conformational Dynamics of the Substrate-Binding Domain 1 of the ABC Transporter GlnPQ.
J.Phys.Chem.B, 128, 2024
7RKR
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BU of 7rkr by Molmil
Naegleria fowleri CYP51 (NfCYP51) complex with (S)-1-(4-fluorophenyl)-2-(1H-imidazol-1-yl)ethyl 3-(trifluoromethyl)benzoate
分子名称: (1S)-1-(4-fluorophenyl)-2-(1H-imidazol-1-yl)ethyl 3-(trifluoromethyl)benzoate, CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Sharma, V, Podust, L.M.
登録日2021-07-22
公開日2022-07-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Miconazole-like Scaffold is a Promising Lead for Naegleria fowleri -Specific CYP51 Inhibitors.
J.Med.Chem., 2023
8ZLG
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BU of 8zlg by Molmil
Crystal structure of a beta-1,4-endoglucanase from Bispora sp. MEY-1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Endo-beta-1, 4-glucanase
著者Zheng, J, Luo, H.
登録日2024-05-20
公開日2025-05-28
最終更新日2025-06-04
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Unraveling the Key Determinants of Substrate Promiscuity in Glycoside Hydrolase Family 5_5 Cellulases
To Be Published
6I16
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BU of 6i16 by Molmil
CRYSTAL STRUCTURE OF FASCIN IN COMPLEX WITH COMPOUND 15
分子名称: 6-[(3,4-dichlorophenyl)methyl]-~{N}-(1-methylpyrazol-4-yl)-5-oxidanylidene-1,6-naphthyridine-8-carboxamide, ACETATE ION, Fascin
著者Schuettelkopf, A.W.
登録日2018-10-27
公開日2019-02-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-based design, synthesis and biological evaluation of a novel series of isoquinolone and pyrazolo[4,3-c]pyridine inhibitors of fascin 1 as potential anti-metastatic agents.
Bioorg.Med.Chem.Lett., 29, 2019

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