Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8W4C
DownloadVisualize
BU of 8w4c by Molmil
The sigma-1 receptor from Xenopus laevis in complex with progesterone by soaking
分子名称: PROGESTERONE, Sigma non-opioid intracellular receptor 1
著者Xiao, Y, Fu, C, Sun, Z, Zhou, X.
登録日2023-08-23
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.676 Å)
主引用文献Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
9AZA
DownloadVisualize
BU of 9aza by Molmil
Crystal structure of LolTv4
分子名称: Aminotransferase, class V/Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE
著者Gao, J, Hai, Y.
登録日2024-03-10
公開日2024-07-17
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Enzymatic Synthesis of Unprotected alpha , beta-Diamino Acids via Direct Asymmetric Mannich Reactions.
J.Am.Chem.Soc., 146, 2024
8XN7
DownloadVisualize
BU of 8xn7 by Molmil
Crystal structure of HPK1 kinase domain T165E,S171E phosphomimetic mutant in complex with compound 9f
分子名称: 5-amino-2-((6-methoxy-2-methyl-1,2,3,4-tetrahydroisoquinolin-7-yl)amino)-8-(2-(trifluoromethyl)benzyl)pyrido[2,3-d]pyrimidin-7(8H)-one, Mitogen-activated protein kinase kinase kinase kinase 1
著者Huang, W.X, Liu, R, Ding, K.
登録日2023-12-29
公開日2024-04-10
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Discovery of 5-aminopyrido[2,3-d]pyrimidin-7(8H)-one derivatives as new hematopoietic progenitor kinase 1 (HPK1) inhibitors.
Eur.J.Med.Chem., 269, 2024
8OOK
DownloadVisualize
BU of 8ook by Molmil
CryoEM Structure INO80core Hexasome complex Arp5 grappler refinement state1
分子名称: Actin-related protein 5
著者Zhang, M, Jungblut, A, Hoffmann, T, Eustermann, S.
登録日2023-04-05
公開日2023-07-26
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (5.69 Å)
主引用文献Hexasome-INO80 complex reveals structural basis of noncanonical nucleosome remodeling.
Science, 381, 2023
8XS4
DownloadVisualize
BU of 8xs4 by Molmil
Cryo-EM structure of OSCA1.2-DOPC-1:20-contracted1 state
分子名称: Calcium permeable stress-gated cation channel 1
著者Zhang, Y, Han, Y.
登録日2024-01-08
公開日2024-04-10
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Mechanical activation opens a lipid-lined pore in OSCA ion channels.
Nature, 628, 2024
9B27
DownloadVisualize
BU of 9b27 by Molmil
Dia1 at the Barbed End of F-Actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Palmer, N.J, Barrie, K.R, Dominguez, R.
登録日2024-03-14
公開日2024-05-29
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献Mechanisms of actin filament severing and elongation by formins.
Nature, 632, 2024
8OUT
DownloadVisualize
BU of 8out by Molmil
CRYSTAL STRUCTURE OF DLK IN COMPLEX WITH COMPOUND 22
分子名称: (1R)-1-[4-[6-azanyl-5-(trifluoromethyloxy)pyridin-3-yl]-1-(3-fluoranyl-1-bicyclo[1.1.1]pentanyl)imidazol-2-yl]-2,2,2-tris(fluoranyl)ethanol, Mitogen-activated protein kinase kinase kinase 12
著者Zebisch, M, Akkermans, O, Barker, J.J, Cross, J.B.
登録日2023-04-24
公開日2023-07-26
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.935 Å)
主引用文献Discovery of IACS-52825, a Potent and Selective DLK Inhibitor for Treatment of Chemotherapy-Induced Peripheral Neuropathy.
J.Med.Chem., 66, 2023
8W4B
DownloadVisualize
BU of 8w4b by Molmil
The sigma-1 receptor from Xenopus laevis in complex with progesterone by co-crystallization
分子名称: PROGESTERONE, Sigma non-opioid intracellular receptor 1
著者Xiao, Y, Fu, C, Sun, Z, Zhou, X.
登録日2023-08-23
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.152 Å)
主引用文献Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
9CBE
DownloadVisualize
BU of 9cbe by Molmil
Structure of a type III antifreeze protein isoform HPLC12 re-refined using standard protocols
分子名称: Type-3 ice-structuring protein HPLC 12
著者Wlodawer, A, Dauter, Z.
登録日2024-06-19
公開日2024-07-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献In some cases more complicated approaches to refinement of macromolecular structures are not necessary.
Iucrj, 11, 2024
9BUV
DownloadVisualize
BU of 9buv by Molmil
Crystal structure of Cry1Fa R226Q
分子名称: Pesticidal crystal protein Cry1Fa
著者Poland, B.W, Kakani, K, Yamamoto, T.
登録日2024-05-17
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.024 Å)
主引用文献Crystal structure of Cry1Fa R226Q
To Be Published
8WUE
DownloadVisualize
BU of 8wue by Molmil
The sigma-1 receptor from Xenopus laevis in complex with dehydroepiandrosterone sulfate by soaking (C2 form)
分子名称: 17-oxoandrost-5-en-3beta-yl hydrogen sulfate, Sigma non-opioid intracellular receptor 1
著者Fu, C, Sun, Z, Zhou, X.
登録日2023-10-20
公開日2024-07-17
実験手法X-RAY DIFFRACTION (3.089 Å)
主引用文献Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
9BD0
DownloadVisualize
BU of 9bd0 by Molmil
Solution Structure of a Disulfide Insertion Mutant of S. aureus SPIN
分子名称: Myeloperoxidase inhibitor SPIN
著者Mishra, N.B, Prakash, O, Geisbrecht, B.V.
登録日2024-04-10
公開日2024-05-29
最終更新日2024-07-03
実験手法SOLUTION NMR
主引用文献Staphylococcal peroxidase inhibitor (SPIN): Investigation of the inhibitory N-terminal domain via a stabilizing disulfide insertion.
Arch.Biochem.Biophys., 758, 2024
8P3O
DownloadVisualize
BU of 8p3o by Molmil
Full-length bacterial polysaccharide co-polymerase WzzE mutant R267A from E. coli. C4 symmetry
分子名称: ECA polysaccharide chain length modulation protein
著者Wiseman, B, Hogbom, M.
登録日2023-05-18
公開日2023-07-26
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Alternating L4 loop architecture of the bacterial polysaccharide co-polymerase WzzE.
Commun Biol, 6, 2023
8XW1
DownloadVisualize
BU of 8xw1 by Molmil
Cryo-EM structure of OSCA1.2-V335W-DDM state
分子名称: Calcium permeable stress-gated cation channel 1
著者Zhang, Y, Han, Y.
登録日2024-01-15
公開日2024-04-10
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.49 Å)
主引用文献Mechanical activation opens a lipid-lined pore in OSCA ion channels.
Nature, 628, 2024
8YPJ
DownloadVisualize
BU of 8ypj by Molmil
Cyrstal structure of the MazE-mt10 Antitoxin from Mycobacterium tuberculosis
分子名称: Antitoxin, PHOSPHATE ION
著者Lee, K.Y.
登録日2024-03-17
公開日2024-05-15
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献DNA binding reveals hidden interdomain allostery of a MazE antitoxin from Mycobacterium tuberculosis.
Biochem.Biophys.Res.Commun., 710, 2024
9FZ4
DownloadVisualize
BU of 9fz4 by Molmil
SARS CoV-2 nsp10 in complex with theExoN domain from nsp14
分子名称: GLYCEROL, Guanine-N7 methyltransferase nsp14, MAGNESIUM ION, ...
著者Fisher, S.Z.
登録日2024-07-04
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献SARS CoV-2 nsp10 in complex with theExoN domain from nsp14
To Be Published
8WV5
DownloadVisualize
BU of 8wv5 by Molmil
C-reactive protein, decamer
分子名称: C-reactive protein(1-205), CALCIUM ION
著者Yadav, S, Vinothkumar, K.R.
登録日2023-10-23
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
8P25
DownloadVisualize
BU of 8p25 by Molmil
Solution structure of a chimeric U2AF2 RRM2 / FUBP1 N-Box
分子名称: Splicing factor U2AF 65 kDa subunit,Far upstream element-binding protein 1
著者Hipp, C, Sattler, M.
登録日2023-05-14
公開日2023-07-26
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献FUBP1 is a general splicing factor facilitating 3' splice site recognition and splicing of long introns.
Mol.Cell, 83, 2023
8VJ1
DownloadVisualize
BU of 8vj1 by Molmil
Structure of C-terminal domain of telomere resolvase, ResT, from Borrelia garinii
分子名称: Telomere resolvase ResT
著者Semper, C, Savchenko, A, Watanabe, N, Center for Structural Biology of Infectious Diseases (CSBID)
登録日2024-01-05
公開日2024-07-17
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structure analysis of the telomere resolvase from the Lyme disease spirochete Borrelia garinii reveals functional divergence of its C-terminal domain.
Nucleic Acids Res., 52, 2024
8Y8Z
DownloadVisualize
BU of 8y8z by Molmil
Structure of NET-Maprotiline in outward-open state
分子名称: CHLORIDE ION, SODIUM ION, Sodium-dependent noradrenaline transporter, ...
著者Zhang, H, Xu, E.H, Jiang, Y.
登録日2024-02-06
公開日2024-05-29
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献Dimerization and antidepressant recognition at noradrenaline transporter.
Nature, 630, 2024
9ERO
DownloadVisualize
BU of 9ero by Molmil
CTE type III tau filament from vacuolar tauopathy
分子名称: Microtubule-associated protein tau
著者Qi, C, Scheres, H.W.S, Goedert, M.
登録日2024-03-24
公開日2024-05-29
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Tau filaments with the chronic traumatic encephalopathy fold in a case of vacuolar tauopathy with VCP mutation D395G.
Acta Neuropathol, 147, 2024
8W4E
DownloadVisualize
BU of 8w4e by Molmil
Crystal structure of the sigma-1 receptor from Xenopus laevis in the absence of known ligands (C2 form)
分子名称: Sigma non-opioid intracellular receptor 1
著者Xiao, Y, Fu, C, Sun, Z, Zhou, X.
登録日2023-08-23
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.805 Å)
主引用文献Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
8P8C
DownloadVisualize
BU of 8p8c by Molmil
HUMAN CD38 ECTODOMAIN BOUND TO COMPOUND 9-ADPR ADDUCT
分子名称: ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[4-[4-[[4-(2-methoxyethoxy)cyclohexyl]amino]-1-methyl-2-oxidanylidene-quinolin-6-yl]pyrazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
著者Rangel, V, Zebisch, M, Doyle, K.J, Burli, R.W.
登録日2023-05-31
公開日2023-07-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.653 Å)
主引用文献A Covalent Binding Mode of a Pyrazole-Based CD38 Inhibitor
Helv.Chim.Acta, 106, 2023
8WXF
DownloadVisualize
BU of 8wxf by Molmil
PNPase of Mycobacterium tuberculosis
分子名称: Bifunctional guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase
著者Wang, N, Sheng, Y.N, Liu, Y.T.
登録日2023-10-29
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structures of Mycobacterium tuberculosis polynucleotide phosphorylase suggest a potential mechanism for its RNA substrate degradation.
Arch.Biochem.Biophys., 754, 2024
9FE0
DownloadVisualize
BU of 9fe0 by Molmil
Crystal Structure of reduced NuoEF variant R66G(NuoF) from Aquifex aeolicus bound to NAD+
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Wohlwend, D, Friedrich, T, Goeppert-Asadollahpour, S.
登録日2024-05-17
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural robustness of the NADH binding site in NADH:ubiquinone oxidoreductase (complex I).
Biochim Biophys Acta Bioenerg, 1865, 2024

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon