PDB: 221051 件ウェブページステータス検索Chemie searchBIRD

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4PSY	100K crystal structure of Escherichia coli dihydrofolate reductase 分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ... 著者 Wilson, M.A, Wan, Q, Bennet, B.C, Dealwis, C, Ringe, D, Petsko, G.A. 登録日 2014-03-08 公開日 2014-05-14 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Toward resolving the catalytic mechanism of dihydrofolate reductase using neutron and ultrahigh-resolution X-ray crystallography. Proc.Natl.Acad.Sci.USA, 22, 2014
2PF8	Complex of Aldose Reductase with NADP+ and simaltaneously bound competetive inhibitors Fidarestat and IDD594. Concentration of Fidarestat in soaking solution is equal to concentration of IDD594. 分子名称: (2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE, Aldose reductase, CHLORIDE ION, ... 著者 Petrova, T, Hazemann, I, Cousido, A, Mitschler, A, Ginell, S, Joachimiak, A, Podjarny, A. 登録日 2007-04-04 公開日 2007-04-17 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Crystal packing modifies ligand binding affinity: The case of aldose reductase. Proteins, 80, 2012
4IGS	Crystal structure of human Aldose Reductase complexed with NADP+ and JF0064 分子名称: 2,2',3,3',5,5',6,6'-octafluorobiphenyl-4,4'-diol, Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Cousido-Siah, A, Ruiz, F.X, Mitschler, A, Porte, S, de Lera, A.R, Martin, M.J, de la Fuente, J.A, Klebe, G, Farres, J, Pares, X, Podjarny, A. 登録日 2012-12-18 公開日 2014-03-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Identification of a novel polyfluorinated compound as a lead to inhibit the human enzymes aldose reductase and AKR1B10: structure determination of both ternary complexes and implications for drug design. Acta Crystallogr.,Sect.D, 70, 2014
2OL9	Peptide corresponding to residues 170-175 of human prion 分子名称: peptide from human prion 著者 Apostol, M.A, Sawaya, M.R, Eisenberg, D. 登録日 2007-01-18 公開日 2007-01-30 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Atomic structures of amyloid cross-beta spines reveal varied steric zippers. Nature, 447, 2007
2PFH	Complex of Aldose Reductase with NADP+ and simaltaneously bound competetive inhibitors Fidarestat and IDD594. Concentration of Fidarestat in soaking solution is less than concentration of IDD594. 分子名称: (2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE, Aldose reductase, CHLORIDE ION, ... 著者 Petrova, T, Hazemann, I, Cousido, A, Mitschler, A, Ginell, S, Joachimiak, A, Podjarny, A. 登録日 2007-04-05 公開日 2007-04-17 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Crystal packing modifies ligand binding affinity: The case of aldose reductase. Proteins, 80, 2012
1X8P	0.85 A Crystal Structure Of Nitrophorin 4 From Rhodnius Prolixus Complexed With Ammonia at pH 7.4 分子名称: AMMONIA, Nitrophorin 4, PROTOPORPHYRIN IX CONTAINING FE 著者 Kondrashov, D.A, Roberts, S.A, Weichsel, A, Montfort, W.R. 登録日 2004-08-18 公開日 2004-10-05 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Protein functional cycle viewed at atomic resolution: conformational change and mobility in nitrophorin 4 as a function of pH and NO binding Biochemistry, 43, 2004
3QPA	Structure of Fusarium Solani Cutinase expressed in Pichia pastoris 分子名称: Cutinase 著者 Lu, A, Gosser, Y, Montclare, J.K, Liu, Z, Kong, X. 登録日 2011-02-11 公開日 2012-02-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Structure of Fusarium Solani Cutinase expressed in Pichia pastoris To be Published
1M40	ULTRA HIGH RESOLUTION CRYSTAL STRUCTURE OF TEM-1 分子名称: BETA-LACTAMASE TEM, PHOSPHATE ION, PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)-4-THIAZOLEACETYL]AMINO]METHANEBORONATE, ... 著者 Minasov, G, Wang, X, Shoichet, B.K. 登録日 2002-07-01 公開日 2002-07-17 最終更新日 2021-10-27 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 An ultrahigh resolution structure of TEM-1 beta-lactamase suggests a role for Glu166 as the general base in acylation. J.Am.Chem.Soc., 124, 2002
2F01	Epi-biotin complex with core streptavidin 分子名称: BIOTIN, EPI-BIOTIN, GLYCEROL, ... 著者 Le Trong, I, Aubert, D.G, Thomas, N.R, Stenkamp, R.E. 登録日 2005-11-10 公開日 2005-11-29 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 The high-resolution structure of (+)-epi-biotin bound to streptavidin. Acta Crystallogr.,Sect.D, 62, 2006
2FMA	Structure of the Alzheimer's Amyloid Precursor Protein (APP) Copper Binding Domain in 'small unit cell' form, atomic resolution 分子名称: Amyloid beta A4 protein precursor, GLYCEROL 著者 Kong, G.K.-W. 登録日 2006-01-08 公開日 2007-01-16 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Structure of Alzheimer's disease amyloid precursor protein copper-binding domain at atomic resolution. Acta Crystallogr.,Sect.F, 63, 2007
5MRX	27-nt SRL with a 5-hydroxymethyl cytidine modification 分子名称: RNA (27-MER) 著者 Ennifar, E, Micura, R. 登録日 2016-12-28 公開日 2018-01-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (0.851 Å) 主引用文献 Synthesis, Thermodynamic Properties, and Crystal Structure of RNA Oligonucleotides Containing 5-Hydroxymethylcytosine J.Org.Chem., 2017
6Q01	TDP2 UBA Domain Bound to Ubiquitin at 0.85 Angstroms Resolution, Crystal Form 2 分子名称: 1,2-ETHANEDIOL, BENZOIC ACID, MAGNESIUM ION, ... 著者 Schellenberg, M.J, Krahn, J.M, Williams, R.S. 登録日 2019-08-01 公開日 2020-04-29 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (0.851 Å) 主引用文献 Ubiquitin stimulated reversal of topoisomerase 2 DNA-protein crosslinks by TDP2. Nucleic Acids Res., 48, 2020
5NQI	E.coli 16S rRNA Sarcin-Ricin Loop containing a 5-hydroxymethylcytosine modification 分子名称: E.Coli 27-mer SRL RNA 著者 Ennifar, E, Micura, R. 登録日 2017-04-20 公開日 2017-07-26 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (0.851 Å) 主引用文献 Synthesis, Thermodynamic Properties, and Crystal Structure of RNA Oligonucleotides Containing 5-Hydroxymethylcytosine. J. Org. Chem., 82, 2017
6KL1	Crystal structure of the S65T/F99S/M153T/V163A variant of non-deuterated GFP at pD 8.5 分子名称: Green fluorescent protein 著者 Tai, Y, Takaba, K, Hanazono, Y, Dao, H.A, Miki, K, Takeda, K. 登録日 2019-07-28 公開日 2019-12-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (0.851 Å) 主引用文献 X-ray crystallographic studies on the hydrogen isotope effects of green fluorescent protein at sub-angstrom resolutions Acta Crystallogr.,Sect.D, 75, 2019
5D9E	Crystal Structure of the Proline-rich Lasso Peptide Caulosegnin II 分子名称: CHLORIDE ION, Caulosegnin II 著者 Fage, C.D, Hegemann, J.D, Harms, K, Marahiel, M.A. 登録日 2015-08-18 公開日 2016-02-17 最終更新日 2019-05-08 実験手法 X-RAY DIFFRACTION (0.859 Å) 主引用文献 The ring residue proline 8 is crucial for the thermal stability of the lasso peptide caulosegnin II. Mol Biosyst, 12, 2016
5MNN	Cationic trypsin in complex with N-amidinopiperidine (deuterated sample at 100 K) 分子名称: CALCIUM ION, Cationic trypsin, SULFATE ION, ... 著者 Schiebel, J, Heine, A, Klebe, G. 登録日 2016-12-13 公開日 2018-01-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (0.859 Å) 主引用文献 Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes. Nat Commun, 9, 2018
4TKB	The 0.86 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with lauric acid 分子名称: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ... 著者 Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M. 登録日 2014-05-26 公開日 2015-01-28 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein Angew.Chem.Int.Ed.Engl., 54, 2015
1MUW	The 0.86 Angstrom Structure of Xylose Isomerase 分子名称: HYDROXIDE ION, MAGNESIUM ION, MANGANESE (II) ION, ... 著者 Fenn, T.D, Ringe, D, Petsko, G.A. 登録日 2002-09-24 公開日 2002-11-06 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Active Site Dynamics at 0.86A: Crystallographic Analysis of a Metal-Mediated Hydride Shift To be Published
2DDX	Crystal structure of beta-1,3-xylanase from Vibrio sp. AX-4 分子名称: GLYCEROL, MAGNESIUM ION, beta-1,3-xylanase 著者 Sakaguchi, K. 登録日 2006-02-06 公開日 2007-02-13 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Atomic resolution analysis of beta-1,3-xylanase catalytic module from Vibrio sp. AX-4 To be Published
6S2S	Hydrogenated human myelin protein P2 at 0.86-A resolution 分子名称: CITRIC ACID, Myelin P2 protein, PALMITIC ACID, ... 著者 Laulumaa, S, Kursula, P. 登録日 2019-06-21 公開日 2019-08-28 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Sub-Atomic Resolution Crystal Structures Reveal Conserved Geometric Outliers at Functional Sites. Molecules, 24, 2019
1G6X	ULTRA HIGH RESOLUTION STRUCTURE OF BOVINE PANCREATIC TRYPSIN INHIBITOR (BPTI) MUTANT WITH ALTERED BINDING LOOP SEQUENCE 分子名称: 1,2-ETHANEDIOL, PANCREATIC TRYPSIN INHIBITOR, SULFATE ION 著者 Addlagatta, A, Czapinska, H, Krzywda, S, Otlewski, J, Jaskolski, M. 登録日 2000-11-08 公開日 2001-05-09 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Ultrahigh-resolution structure of a BPTI mutant. Acta Crystallogr.,Sect.D, 57, 2001
4UAA	CTX-M-14 Class A Beta-Lactamase in Complex with a Non-Covalent Inhibitor at Sub-Angstrom Resolution 分子名称: Beta-lactamase CTX-M-14, N-[3-(2H-tetrazol-5-yl)phenyl]-6-(trifluoromethyl)-1H-benzimidazole-4-carboxamide, PHOSPHATE ION 著者 Nichols, D.A, Chen, Y. 登録日 2014-08-08 公開日 2015-06-24 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Ligand-Induced Proton Transfer and Low-Barrier Hydrogen Bond Revealed by X-ray Crystallography. J.Am.Chem.Soc., 137, 2015
7QSH	23S ribosomal RNA Sarcin Ricin Loop 27-nt fragment containing a Xanthosine residue at position 2648 分子名称: 23S ribosomal RNA Sarcin Ricin Loop 27-nucleotide fragment, 9-[(2~{R},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-[[tris(oxidanyl)-$l^{5}-phosphanyl]oxymethyl]oxolan-2-yl]-2-oxidanyl-1~{H}-purin-6-one, GLYCEROL, ... 著者 Ennifar, E, Micura, R. 登録日 2022-01-13 公開日 2023-01-25 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Towards a comprehensive understanding of RNA deamination: synthesis and properties of xanthosine-modified RNA. Nucleic Acids Res., 50, 2022
3WDN	High-resolution X-ray crystal structure of bovine H-protein using a high-pressure cryocooling method 分子名称: GLYCEROL, Glycine cleavage system H protein, mitochondrial 著者 Higashiura, A, Nakagawa, A. 登録日 2013-06-19 公開日 2013-10-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 High-resolution X-ray crystal structure of bovine H-protein using the high-pressure cryocooling method J.SYNCHROTRON RADIAT., 20, 2013
7X48	The 0.86 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with pelargonic acid 分子名称: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ... 著者 Sugiyama, S, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M. 登録日 2022-03-02 公開日 2023-03-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 The 0.86 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with pelargonic acid To Be Published

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