PDB: 222415 件ウェブページステータス検索Chemie searchBIRD

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2PF8	Complex of Aldose Reductase with NADP+ and simaltaneously bound competetive inhibitors Fidarestat and IDD594. Concentration of Fidarestat in soaking solution is equal to concentration of IDD594. 分子名称: (2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE, Aldose reductase, CHLORIDE ION, ... 著者 Petrova, T, Hazemann, I, Cousido, A, Mitschler, A, Ginell, S, Joachimiak, A, Podjarny, A. 登録日 2007-04-04 公開日 2007-04-17 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Crystal packing modifies ligand binding affinity: The case of aldose reductase. Proteins, 80, 2012
4PTH	Ensemble model for Escherichia coli dihydrofolate reductase at 100K 分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ... 著者 Keedy, D.A, van den Bedem, H, Sivak, D.A, Petsko, G.A, Ringe, D, Wilson, M.A, Fraser, J.S. 登録日 2014-03-10 公開日 2014-05-14 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Crystal Cryocooling Distorts Conformational Heterogeneity in a Model Michaelis Complex of DHFR. Structure, 22, 2014
7KQO	Crystal structure of SARS-CoV-2 NSP3 macrodomain (P43 crystal form) 分子名称: Non-structural protein 3 著者 Correy, G.J, Young, I.D, Thompson, M.C, Fraser, J.S. 登録日 2020-11-17 公開日 2020-12-09 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking. Sci Adv, 7, 2021
1PQ5	Trypsin at pH 5, 0.85 A 分子名称: ARGININE, SULFATE ION, Trypsin 著者 Schmidt, A, Jelsch, C, Rypniewski, W, Lamzin, V.S. 登録日 2003-06-18 公開日 2003-11-11 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS. J.Biol.Chem., 278, 2003
2OL9	Peptide corresponding to residues 170-175 of human prion 分子名称: peptide from human prion 著者 Apostol, M.A, Sawaya, M.R, Eisenberg, D. 登録日 2007-01-18 公開日 2007-01-30 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Atomic structures of amyloid cross-beta spines reveal varied steric zippers. Nature, 447, 2007
4AYP	Structure of The GH47 processing alpha-1,2-mannosidase from Caulobacter strain K31 in complex with thiomannobioside 分子名称: CALCIUM ION, MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE, SODIUM ION, ... 著者 Thompson, A.J, Dabin, J, Iglesias-Fernandez, J, Iglesias-Fernandez, A, Dinev, Z, Williams, S.J, Siriwardena, A, Moreland, C, Hu, T.C, Smith, D.K, Gilbert, H.J, Rovira, C, Davies, G.J. 登録日 2012-06-21 公開日 2013-01-30 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 The Reaction Coordinate of a Bacterial Gh47 Alpha-Mannosidase: A Combined Quantum Mechanical and Structural Approach. Angew.Chem.Int.Ed.Engl., 51, 2012
1M40	ULTRA HIGH RESOLUTION CRYSTAL STRUCTURE OF TEM-1 分子名称: BETA-LACTAMASE TEM, PHOSPHATE ION, PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)-4-THIAZOLEACETYL]AMINO]METHANEBORONATE, ... 著者 Minasov, G, Wang, X, Shoichet, B.K. 登録日 2002-07-01 公開日 2002-07-17 最終更新日 2021-10-27 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 An ultrahigh resolution structure of TEM-1 beta-lactamase suggests a role for Glu166 as the general base in acylation. J.Am.Chem.Soc., 124, 2002
2F01	Epi-biotin complex with core streptavidin 分子名称: BIOTIN, EPI-BIOTIN, GLYCEROL, ... 著者 Le Trong, I, Aubert, D.G, Thomas, N.R, Stenkamp, R.E. 登録日 2005-11-10 公開日 2005-11-29 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 The high-resolution structure of (+)-epi-biotin bound to streptavidin. Acta Crystallogr.,Sect.D, 62, 2006
2FMA	Structure of the Alzheimer's Amyloid Precursor Protein (APP) Copper Binding Domain in 'small unit cell' form, atomic resolution 分子名称: Amyloid beta A4 protein precursor, GLYCEROL 著者 Kong, G.K.-W. 登録日 2006-01-08 公開日 2007-01-16 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Structure of Alzheimer's disease amyloid precursor protein copper-binding domain at atomic resolution. Acta Crystallogr.,Sect.F, 63, 2007
3U7T	Room temperature ultra-high resolution time-of-flight neutron and X-ray diffraction studies of H/D exchanged crambin 分子名称: Crambin 著者 Chen, J.C.-H. 登録日 2011-10-14 公開日 2012-02-08 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (0.85 Å) 主引用文献 Room-temperature ultrahigh-resolution time-of-flight neutron and X-ray diffraction studies of H/D-exchanged crambin. Acta Crystallogr.,Sect.F, 68, 2012
5NQI	E.coli 16S rRNA Sarcin-Ricin Loop containing a 5-hydroxymethylcytosine modification 分子名称: E.Coli 27-mer SRL RNA 著者 Ennifar, E, Micura, R. 登録日 2017-04-20 公開日 2017-07-26 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (0.851 Å) 主引用文献 Synthesis, Thermodynamic Properties, and Crystal Structure of RNA Oligonucleotides Containing 5-Hydroxymethylcytosine. J. Org. Chem., 82, 2017
5MRX	27-nt SRL with a 5-hydroxymethyl cytidine modification 分子名称: RNA (27-MER) 著者 Ennifar, E, Micura, R. 登録日 2016-12-28 公開日 2018-01-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (0.851 Å) 主引用文献 Synthesis, Thermodynamic Properties, and Crystal Structure of RNA Oligonucleotides Containing 5-Hydroxymethylcytosine J.Org.Chem., 2017
6Q01	TDP2 UBA Domain Bound to Ubiquitin at 0.85 Angstroms Resolution, Crystal Form 2 分子名称: 1,2-ETHANEDIOL, BENZOIC ACID, MAGNESIUM ION, ... 著者 Schellenberg, M.J, Krahn, J.M, Williams, R.S. 登録日 2019-08-01 公開日 2020-04-29 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (0.851 Å) 主引用文献 Ubiquitin stimulated reversal of topoisomerase 2 DNA-protein crosslinks by TDP2. Nucleic Acids Res., 48, 2020
6KL1	Crystal structure of the S65T/F99S/M153T/V163A variant of non-deuterated GFP at pD 8.5 分子名称: Green fluorescent protein 著者 Tai, Y, Takaba, K, Hanazono, Y, Dao, H.A, Miki, K, Takeda, K. 登録日 2019-07-28 公開日 2019-12-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (0.851 Å) 主引用文献 X-ray crystallographic studies on the hydrogen isotope effects of green fluorescent protein at sub-angstrom resolutions Acta Crystallogr.,Sect.D, 75, 2019
5D9E	Crystal Structure of the Proline-rich Lasso Peptide Caulosegnin II 分子名称: CHLORIDE ION, Caulosegnin II 著者 Fage, C.D, Hegemann, J.D, Harms, K, Marahiel, M.A. 登録日 2015-08-18 公開日 2016-02-17 最終更新日 2019-05-08 実験手法 X-RAY DIFFRACTION (0.859 Å) 主引用文献 The ring residue proline 8 is crucial for the thermal stability of the lasso peptide caulosegnin II. Mol Biosyst, 12, 2016
5MNN	Cationic trypsin in complex with N-amidinopiperidine (deuterated sample at 100 K) 分子名称: CALCIUM ION, Cationic trypsin, SULFATE ION, ... 著者 Schiebel, J, Heine, A, Klebe, G. 登録日 2016-12-13 公開日 2018-01-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (0.859 Å) 主引用文献 Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes. Nat Commun, 9, 2018
1MUW	The 0.86 Angstrom Structure of Xylose Isomerase 分子名称: HYDROXIDE ION, MAGNESIUM ION, MANGANESE (II) ION, ... 著者 Fenn, T.D, Ringe, D, Petsko, G.A. 登録日 2002-09-24 公開日 2002-11-06 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Active Site Dynamics at 0.86A: Crystallographic Analysis of a Metal-Mediated Hydride Shift To be Published
7QSH	23S ribosomal RNA Sarcin Ricin Loop 27-nt fragment containing a Xanthosine residue at position 2648 分子名称: 23S ribosomal RNA Sarcin Ricin Loop 27-nucleotide fragment, 9-[(2~{R},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-[[tris(oxidanyl)-$l^{5}-phosphanyl]oxymethyl]oxolan-2-yl]-2-oxidanyl-1~{H}-purin-6-one, GLYCEROL, ... 著者 Ennifar, E, Micura, R. 登録日 2022-01-13 公開日 2023-01-25 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Towards a comprehensive understanding of RNA deamination: synthesis and properties of xanthosine-modified RNA. Nucleic Acids Res., 50, 2022
4UAA	CTX-M-14 Class A Beta-Lactamase in Complex with a Non-Covalent Inhibitor at Sub-Angstrom Resolution 分子名称: Beta-lactamase CTX-M-14, N-[3-(2H-tetrazol-5-yl)phenyl]-6-(trifluoromethyl)-1H-benzimidazole-4-carboxamide, PHOSPHATE ION 著者 Nichols, D.A, Chen, Y. 登録日 2014-08-08 公開日 2015-06-24 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Ligand-Induced Proton Transfer and Low-Barrier Hydrogen Bond Revealed by X-ray Crystallography. J.Am.Chem.Soc., 137, 2015
8K9N	Subatomic resolution structure of Pseudoazurin from Alcaligenes faecalis 分子名称: COPPER (II) ION, Pseudoazurin, SULFATE ION 著者 Fukuda, Y, Lintuluoto, M, Kurihara, K, Hasegawa, K, Inoue, T, Tamada, T. 登録日 2023-08-01 公開日 2024-02-14 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Overlooked Hydrogen Bond in a Blue Copper Protein Uncovered by Neutron and Sub- angstrom ngstrom Resolution X-ray Crystallography. Biochemistry, 63, 2024
2DDX	Crystal structure of beta-1,3-xylanase from Vibrio sp. AX-4 分子名称: GLYCEROL, MAGNESIUM ION, beta-1,3-xylanase 著者 Sakaguchi, K. 登録日 2006-02-06 公開日 2007-02-13 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Atomic resolution analysis of beta-1,3-xylanase catalytic module from Vibrio sp. AX-4 To be Published
6S2S	Hydrogenated human myelin protein P2 at 0.86-A resolution 分子名称: CITRIC ACID, Myelin P2 protein, PALMITIC ACID, ... 著者 Laulumaa, S, Kursula, P. 登録日 2019-06-21 公開日 2019-08-28 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Sub-Atomic Resolution Crystal Structures Reveal Conserved Geometric Outliers at Functional Sites. Molecules, 24, 2019
3WDN	High-resolution X-ray crystal structure of bovine H-protein using a high-pressure cryocooling method 分子名称: GLYCEROL, Glycine cleavage system H protein, mitochondrial 著者 Higashiura, A, Nakagawa, A. 登録日 2013-06-19 公開日 2013-10-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 High-resolution X-ray crystal structure of bovine H-protein using the high-pressure cryocooling method J.SYNCHROTRON RADIAT., 20, 2013
7WJ1	The 0.86 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with arachidonic acid 分子名称: ARACHIDONIC ACID, Fatty acid-binding protein, heart, ... 著者 Sugiyama, S, Kakinouchi, K, Nakano, R, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M. 登録日 2022-01-05 公開日 2023-01-25 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 The 0.86 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with arachidonic acid To Be Published
1G6X	ULTRA HIGH RESOLUTION STRUCTURE OF BOVINE PANCREATIC TRYPSIN INHIBITOR (BPTI) MUTANT WITH ALTERED BINDING LOOP SEQUENCE 分子名称: 1,2-ETHANEDIOL, PANCREATIC TRYPSIN INHIBITOR, SULFATE ION 著者 Addlagatta, A, Czapinska, H, Krzywda, S, Otlewski, J, Jaskolski, M. 登録日 2000-11-08 公開日 2001-05-09 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (0.86 Å) 主引用文献 Ultrahigh-resolution structure of a BPTI mutant. Acta Crystallogr.,Sect.D, 57, 2001

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