PDB: 394 件ウェブページステータス検索Chemie searchBIRD

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1RUN	CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA (5'-D(*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*TP*TP*TP*TP*CP*G )-3'), DNA (5'-D(*GP*CP*GP*AP*AP*AP*AP*AP*TP*GP*TP*GP*AP*T)-3'), ... 著者 Parkinson, G.N, Gunasekera, A, Vojtechovsky, J, Zhang, X, Kunkel, T.A, Berman, H.M, Ebright, R.H. 登録日 1996-05-26 公開日 1997-01-10 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Aromatic hydrogen bond in sequence-specific protein DNA recognition. Nat.Struct.Biol., 3, 1996
6BYR	Structures of the PKA RI alpha holoenzyme with the FLHCC driver J-PKAc alpha or native PKAc alpha 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DnaJ homolog subfamily B member 1,cAMP-dependent protein kinase catalytic subunit alpha chimera, MAGNESIUM ION, ... 著者 Cao, B, Lu, T.W, Martinez Fiesco, J.A, Tomasini, M, Fan, L, Simon, S.M, Taylor, S.S, Zhang, P. 登録日 2017-12-21 公開日 2019-04-03 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.661 Å) 主引用文献 Structures of the PKA RI alpha Holoenzyme with the FLHCC Driver J-PKAc alpha or Wild-Type PKAc alpha. Structure, 27, 2019
7ETS	Crystal structure of crp protein from Gardnerella Vaginalis 分子名称: Crp/Fnr family transcriptional regulator, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Dong, H.J, Wang, S, Zhang, J.M, Gu, L. 登録日 2021-05-13 公開日 2022-04-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Crystal structure of crp protein from Gardnerella Vaginalis To Be Published
2CGP	CATABOLITE GENE ACTIVATOR PROTEIN/DNA COMPLEX, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA (5'-D(*AP*TP*TP*AP*AP*TP*GP*TP*GP*AP*CP*AP*TP*AP*T)-3'), DNA (5'-D(*GP*TP*CP*AP*CP*AP*TP*TP*AP*AP*T)-3'), ... 著者 Passner, J.M, Steitz, T.A. 登録日 1997-01-31 公開日 1998-02-04 最終更新日 2023-08-02 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The structure of a CAP-DNA complex having two cAMP molecules bound to each monomer. Proc.Natl.Acad.Sci.USA, 94, 1997
2XGX	Crystal structure of transcription factor NtcA from Synechococcus elongatus (mercury derivative) 分子名称: 2-OXOGLUTARIC ACID, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLOBAL NITROGEN REGULATOR, ... 著者 Llacer, J.L, Castells, M.A, Rubio, V. 登録日 2010-06-08 公開日 2010-08-18 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Structural Basis for the Regulation of Ntca-Dependent Transcription by Proteins Pipx and Pii. Proc.Natl.Acad.Sci.USA, 107, 2010
2ZCW	Crystal Structure of TTHA1359, a Transcriptional Regulator, CRP/FNR family from Thermus thermophilus HB8 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Transcriptional regulator, FNR/CRP family 著者 Agari, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-11-13 公開日 2007-12-04 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Global gene expression mediated by Thermus thermophilus SdrP, a CRP/FNR family transcriptional regulator Mol.Microbiol., 70, 2008
2ZD9	Structure of a Bacterial Cyclic-Nucleotide Regulated Ion Channel 分子名称: Mll3241 protein, POTASSIUM ION 著者 Clayton, G.M, Cabral-Morais, J.M. 登録日 2007-11-21 公開日 2008-12-02 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Structure of the transmembrane regions of a bacterial cyclic nucleotide-regulated channel. Proc.Natl.Acad.Sci.USA, 105, 2008
2H6B	Crystal structure of oxidized CprK in complex with o-chlorophenolacetic acid 分子名称: (3-CHLORO-4-HYDROXYPHENYL)ACETIC ACID, ChloroPhenol Reduction gene K, SULFATE ION 著者 Joyce, M.G, Levy, C, Leys, D. 登録日 2006-05-31 公開日 2006-07-04 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 CprK Crystal Structures Reveal Mechanism for Transcriptional Control of Halorespiration. J.Biol.Chem., 281, 2006
2GZW	Crystal structure of the E.coli CRP-cAMP complex 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator 著者 Kumarevel, T.S, Tanaka, T, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2006-05-12 公開日 2007-05-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Crystal structure of activated CRP protein from E coli To be Published
6CJT	Structure of the SthK cyclic nucleotide-gated potassium channel in complex with cGMP 分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, CYCLIC GUANOSINE MONOPHOSPHATE, SthK cyclic nucleotide-gated potassium channel 著者 Nimigean, C.M, Rheinberger, J. 登録日 2018-02-26 公開日 2018-08-01 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.46 Å) 主引用文献 Ligand discrimination and gating in cyclic nucleotide-gated ion channels from apo and partial agonist-bound cryo-EM structures. Elife, 7, 2018
6CJU	Structure of the SthK cyclic nucleotide-gated potassium channel in complex with cAMP 分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, SthK cyclic nucleotide-gated potassium channel 著者 Nimigean, C.M, Rheinberger, J. 登録日 2018-02-26 公開日 2018-08-01 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.35 Å) 主引用文献 Ligand discrimination and gating in cyclic nucleotide-gated ion channels from apo and partial agonist-bound cryo-EM structures. Elife, 7, 2018
2H6C	Crystal structure of reduced CprK in absence of any ligand 分子名称: ChloroPhenol Reduction gene K 著者 Levy, C, Leys, D. 登録日 2006-05-31 公開日 2006-07-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 CprK Crystal Structures Reveal Mechanism for Transcriptional Control of Halorespiration. J.Biol.Chem., 281, 2006
7FEW	Pseudomonas aeruginosa Virulence Factor Regulator with cAMP ligand and auranofin gold analogues 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, SULFATE ION, cAMP-activated global transcriptional regulator Vfr 著者 Chew, B.L.A, Luo, D. 登録日 2021-07-22 公開日 2022-07-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structural basis for the inhibitory mechanism of auranofin and gold(I) analogues against Pseudomonas aeruginosa global virulence factor regulator Vfr. Comput Struct Biotechnol J, 21, 2023
7FF0	Pseudomonas aeruginosa Virulence Factor Regulator with cAMP ligand and auranofin 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, GOLD ION, SULFATE ION, ... 著者 Chew, B.L.A, Luo, D. 登録日 2021-07-22 公開日 2022-07-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis for the inhibitory mechanism of auranofin and gold(I) analogues against Pseudomonas aeruginosa global virulence factor regulator Vfr. Comput Struct Biotechnol J, 21, 2023
7FF8	Pseudomonas aeruginosa Virulence Factor Regulator with cAMP ligand and Cl(triethylphosphine)gold(I) 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CHLORIDE ION, GOLD ION, ... 著者 Chew, B.L.A, Luo, D. 登録日 2021-07-22 公開日 2022-07-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Inhibitory mechanism of gold analogues against Pseudomonas global virulence factor regulator Vfr To Be Published
7FF9	Pseudomonas aeruginosa Virulence Factor Regulator with cAMP ligand and Cl(triethylphosphine)gold(I) 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CHLORIDE ION, GOLD ION, ... 著者 Chew, B.L.A, Luo, D. 登録日 2021-07-23 公開日 2022-07-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Inhibitory mechanism of gold analogues against Pseudomonas global virulence factor regulator Vfr To Be Published
2HKX	Structure of CooA mutant (N127L/S128L) from Carboxydothermus hydrogenoformans 分子名称: CARBON MONOXIDE, Carbon monoxide oxidation system transcription regulator CooA-1, PROTOPORPHYRIN IX CONTAINING FE 著者 Lanz, N.D, Borjigin, M, Li, H, Kerby, R.L, Poulos, T.L, Roberts, G.P. 登録日 2006-07-05 公開日 2007-03-06 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure-based hypothesis on the activation of the CO-sensing transcription factor CooA. Acta Crystallogr.,Sect.D, 63, 2007
3KCC	Crystal structure of D138L mutant of Catabolite Gene Activator Protein 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator 著者 Tao, W.B, Gao, Z.Q, Zhou, J.H, Dong, Y.H, Yu, S.N. 登録日 2009-10-21 公開日 2009-11-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 The 1.6A resolution structure of activated D138L mutant of catabolite gene activator protein with two cAMP bound in each monomer Int.J.Biol.Macromol., 48, 2011
3LA7	Crystal structure of NtcA in apo-form 分子名称: Global nitrogen regulator, octyl beta-D-glucopyranoside 著者 Zhao, M.X, Jiang, Y.L, He, Y.X, Chen, Y.F, Teng, Y.B, Zhang, C.C, Chen, Y.X, Zhou, C.Z. 登録日 2010-01-06 公開日 2010-09-01 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis for the allosteric control of the global transcription factor NtcA by the nitrogen starvation signal 2-oxoglutarate. Proc.Natl.Acad.Sci.USA, 107, 2010
5U6O	Structure of the human HCN1 hyperpolarization-activated cyclic nucleotide-gated ion channel 分子名称: Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 著者 Lee, C.-H, MacKinnon, R. 登録日 2016-12-08 公開日 2017-01-25 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structures of the Human HCN1 Hyperpolarization-Activated Channel. Cell, 168, 2017
5U6P	Structure of the human HCN1 hyperpolarization-activated cyclic nucleotide-gated ion channel in complex with cAMP 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 11 著者 Lee, C.-H, MacKinnon, R. 登録日 2016-12-08 公開日 2017-01-25 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.51 Å) 主引用文献 Structures of the Human HCN1 Hyperpolarization-Activated Channel. Cell, 168, 2017
3LA2	Crystal structure of NtcA in complex with 2-oxoglutarate 分子名称: 2-OXOGLUTARIC ACID, Global nitrogen regulator 著者 Zhao, M.X, Jiang, Y.L, He, Y.X, Chen, Y.F, Teng, Y.B, Chen, Y.X, Zhang, C.C, Zhou, C.Z. 登録日 2010-01-06 公開日 2010-07-14 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis for the allosteric control of the global transcription factor NtcA by the nitrogen starvation signal 2-oxoglutarate. Proc.Natl.Acad.Sci.USA, 107, 2010
3LA3	Crystal structure of NtcA in complex with 2,2-difluoropentanedioic acid 分子名称: 2,2-difluoropentanedioic acid, Global nitrogen regulator 著者 Zhao, M.X, Jiang, Y.L, He, Y.X, Chen, Y.F, Teng, Y.B, Chen, Y.X, Zhang, C.C, Zhou, C.Z. 登録日 2010-01-06 公開日 2010-07-14 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural basis for the allosteric control of the global transcription factor NtcA by the nitrogen starvation signal 2-oxoglutarate. Proc.Natl.Acad.Sci.USA, 107, 2010
3J4R	Pseudo-atomic model of the AKAP18-PKA Complex in a linear conformation derived from electron microscopy 分子名称: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit 著者 Reichow, S.L, Gonen, T. 登録日 2013-09-25 公開日 2013-11-13 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (35 Å) 主引用文献 Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation. Elife, 2, 2013
5VA3	Cryo-EM structure of the human ether-a-go-go related K+ channel 分子名称: Potassium voltage-gated channel subfamily H member 2 著者 Wang, W.W, MacKinnon, R. 登録日 2017-03-24 公開日 2017-05-03 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Cryo-EM Structure of the Open Human Ether-a-go-go-Related K(+) Channel hERG. Cell, 169, 2017

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