PDB: 224004 件ウェブページステータス検索Chemie searchBIRD

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6S83	Crystal structure of methionine adenosyltransferase from Pyrococcus furiosus in complex with AMPPCP, SAM, and PCP 分子名称: MAGNESIUM ION, METHYLENEDIPHOSPHONIC ACID, PHOSPHATE ION, ... 著者 Degano, M, Minici, C, Porcelli, M. 登録日 2019-07-08 公開日 2020-02-05 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.336 Å) 主引用文献 Structures of catalytic cycle intermediates of the Pyrococcus furiosus methionine adenosyltransferase demonstrate negative cooperativity in the archaeal orthologues. J.Struct.Biol., 210, 2020
3QAV	Crystal structure of a glutathione S-transferase from Antarctic clam Laternula elliptica 分子名称: Rho-class glutathione S-transferase 著者 Park, A.K, Moon, J.H, Chi, Y.M. 登録日 2011-01-12 公開日 2012-02-01 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The structure of a shellfish specific GST class glutathione S-transferase from antarctic bivalve Laternula elliptica reveals novel active site architecture. Proteins, 81, 2013
3QC6	GspB 分子名称: CALCIUM ION, GLYCEROL, NITROGEN MOLECULE, ... 著者 Pyburn, T.M. 登録日 2011-01-15 公開日 2011-08-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A Structural Model for Binding of the Serine-Rich Repeat Adhesin GspB to Host Carbohydrate Receptors. Plos Pathog., 7, 2011
3QCF	Human receptor protein tyrosine phosphatase gamma, domain 1, in complex with 3-[(3,4-dichlorobenzyl)sulfanyl]thiophene-2-carboxylic acid via co-crystallization 分子名称: 3-[(3,4-dichlorobenzyl)sulfanyl]thiophene-2-carboxylic acid, Receptor-type tyrosine-protein phosphatase gamma, SULFATE ION 著者 Sheriff, S. 登録日 2011-01-16 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Small molecule receptor protein tyrosine phosphatase [gamma](RPTP[gamma]) ligands that inhibit phosphatase activity via perturbation of the tryptophan-proline-aspartate (WPD) loop J.Med.Chem., 54, 2011
3QGH	Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase genotype 1a complex with N-cyclopropyl-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide 分子名称: N-cyclopropyl-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide, PHOSPHATE ION, RNA-directed RNA polymerase 著者 Sheriff, S. 登録日 2011-01-24 公開日 2011-04-20 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Investigation of the mode of binding of a novel series of N-benzyl-4-heteroaryl-1-(phenylsulfonyl)piperazine-2-carboxamides to the hepatitis C virus polymerase. Bioorg.Med.Chem.Lett., 21, 2011
3QH9	Human Liprin-beta2 Coiled-Coil 分子名称: AMMONIUM ION, GLYCEROL, IODIDE ION, ... 著者 Stafford, R.L, Tang, M, Phillips, M.L, Bowie, J.U. 登録日 2011-01-25 公開日 2011-10-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Crystal structure of the central coiled-coil domain from human liprin-beta2 Biochemistry, 50, 2011
3QCG	Human receptor protein tyrosine phosphatase gamma, domain 1, in complex with 3-[(3-bromo-4-chlorobenzyl)sulfanyl]thiophene-2-carboxylic acid 分子名称: 3-[(3-bromo-4-chlorobenzyl)sulfanyl]thiophene-2-carboxylic acid, ACETIC ACID, Receptor-type tyrosine-protein phosphatase gamma 著者 Sheriff, S. 登録日 2011-01-16 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Small molecule receptor protein tyrosine phosphatase [gamma](RPTP[gamma]) ligands that inhibit phosphatase activity via perturbation of the tryptophan-proline-aspartate (WPD) loop J.Med.Chem., 54, 2011
6RU1	Crystal Structure of Glucuronoyl Esterase from Cerrena unicolor inactive S270A variant in complex with the aldouronic acid Um4X 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-O-methyl-alpha-D-glucopyranuronic acid-(1-2)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ... 著者 Ernst, H.A, Mosbech, C, Langkilde, A, Westh, P, Meyer, A, Agger, J.W, Larsen, S. 登録日 2019-05-27 公開日 2020-03-18 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 The structural basis of fungal glucuronoyl esterase activity on natural substrates. Nat Commun, 11, 2020
3QD2	Crystal structure of mouse PERK kinase domain 分子名称: Eukaryotic translation initiation factor 2-alpha kinase 3 著者 Wenjun, C, Jingzhi, L, David, R, Bingdong, S. 登録日 2011-01-17 公開日 2011-04-27 最終更新日 2019-01-16 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 The structure of the PERK kinase domain suggests the mechanism for its activation. Acta Crystallogr.,Sect.D, 67, 2011
8BL1	Human Sirt6 in complex with the inhibitor S6039 and ADP-ribose 分子名称: 2-azanyl-5-[4-[[5-(2-fluorophenyl)thiophen-2-yl]methyl]piperazin-1-yl]sulfonyl-benzenesulfonamide, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 You, W, Steegborn, C. 登録日 2022-11-09 公開日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Development of novel Sirtuin 6 inhibitors and activators based on a protein crystallography-based fragment screen To Be Published
3QGI	Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase genotype 1a complex with N-[(2S)-butan-2-yl]-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide 分子名称: GLYCEROL, N-[(2S)-butan-2-yl]-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide, RNA-directed RNA polymerase 著者 Sheriff, S. 登録日 2011-01-24 公開日 2011-04-20 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Investigation of the mode of binding of a novel series of N-benzyl-4-heteroaryl-1-(phenylsulfonyl)piperazine-2-carboxamides to the hepatitis C virus polymerase. Bioorg.Med.Chem.Lett., 21, 2011
8SNB	atomic model of sea urchin sperm doublet microtubule (48-nm periodicity) 分子名称: ATP6V1FNB, C20Orf85, C4orf45, ... 著者 Zeng, J, Zhang, R. 登録日 2023-04-26 公開日 2023-06-28 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural specializations of the sperm tail. Cell, 2023
6S5P	Cfucosylated peptide SBL2 bound to Fucose binding Lectin LecB (PA-IIL) from Pseudomonas aeruginosa at 1.46 Angstrom resolution 分子名称: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, CALCIUM ION, Fucose-binding lectin, ... 著者 Baeriswyl, S, Stocker, A, Reymond, J.-L. 登録日 2019-07-02 公開日 2019-08-21 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.46 Å) 主引用文献 X-ray Crystal Structures of Short Antimicrobial Peptides as Pseudomonas aeruginosa Lectin B Complexes. Acs Chem.Biol., 14, 2019
3QCC	Human receptor protein tyrosine phosphatase gamma, domain 1, in complex with vanadate, orthorhombic crystal form 分子名称: Receptor-type tyrosine-protein phosphatase gamma, VANADATE ION 著者 Sheriff, S. 登録日 2011-01-16 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Small molecule receptor protein tyrosine phosphatase [gamma](RPTP[gamma]) ligands that inhibit phosphatase activity via perturbation of the tryptophan-proline-aspartate (WPD) loop J.Med.Chem., 54, 2011
8SBE	Structure of the rat vesicular glutamate transporter 2 determined by single-particle Cryo-EM 分子名称: Vesicular glutamate transporter 2 著者 Li, F, Finer-Moore, J, Eriksen, J, Cheng, Y, Edwards, R, Stroud, R. 登録日 2023-04-03 公開日 2023-05-03 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Ion transport and regulation in a synaptic vesicle glutamate transporter. Science, 368, 2020
3QCH	Human receptor protein tyrosine phosphatase gamma, domain 1, in complex with 3-[(3,4-dichlorobenzyl)sulfanyl]-N-(methylsulfonyl)thiophene-2-carboxamide 分子名称: 3-[(3,4-dichlorobenzyl)sulfanyl]-N-(methylsulfonyl)thiophene-2-carboxamide, Receptor-type tyrosine-protein phosphatase gamma 著者 Sheriff, S. 登録日 2011-01-16 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Small molecule receptor protein tyrosine phosphatase [gamma](RPTP[gamma]) ligands that inhibit phosphatase activity via perturbation of the tryptophan-proline-aspartate (WPD) loop J.Med.Chem., 54, 2011
8SGX	Leishmania tarentolae propionyl-CoA carboxylase (alpha-4-beta-6) 分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Propionyl-coa carboxylase beta chain, putative, ... 著者 Lee, J.K.J, Liu, Y.T, Hu, J.J, Aphasizheva, I, Aphasizhev, R, Zhou, Z.H. 登録日 2023-04-13 公開日 2023-05-17 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (10.3 Å) 主引用文献 CryoEM reveals oligomeric isomers of a multienzyme complex and assembly mechanics. J Struct Biol X, 7, 2023
7PPP	Crystal structure of ZAD-domain of ZNF_276 protein from rabbit. 分子名称: ZINC ION, Zinc finger protein 276 著者 Boyko, K.M, Bonchuk, A.N, Nikolaeva, A.Y, Georgiev, P.G, Popov, V.O. 登録日 2021-09-14 公開日 2021-12-08 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural insights into highly similar spatial organization of zinc-finger associated domains with a very low sequence similarity. Structure, 30, 2022
7POH	Crystal structure of ZAD-domain of Serendipity-d protein from D.melanogaster 分子名称: Serendipity locus protein delta, ZINC ION 著者 Boyko, K.M, Kachalova, G.S, Bonchuk, A.N, Nikolaeva, A.Y, Georgiev, P.G, Popov, V.O. 登録日 2021-09-09 公開日 2021-12-08 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Structural insights into highly similar spatial organization of zinc-finger associated domains with a very low sequence similarity. Structure, 30, 2022
3QF6	Neutron structure of type-III Antifreeze Protein allows the reconstruction of AFP-ice interface 分子名称: Type-3 ice-structuring protein HPLC 12 著者 Howard, E.I, Blakeley, M.P, Haertlein, M, Petit-Haertlein, I, Mitschler, A, Fisher, S.J, Cousido-Siah, A, Salvay, A.G, Popov, A, Muller-Dieckmann, C, Petrova, T, Podjarny, A. 登録日 2011-01-21 公開日 2011-06-22 最終更新日 2024-03-20 実験手法 NEUTRON DIFFRACTION (1.85 Å) 主引用文献 Neutron structure of type-III antifreeze protein allows the reconstruction of AFP-ice interface. J.Mol.Recognit., 24, 2011
8SGY	Leishmania tarentolae propionyl-CoA carboxylase (alpha-5-beta-6) 分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Propionyl-coa carboxylase beta chain, putative, ... 著者 Lee, J.K.J, Liu, Y.T, Hu, J.J, Aphasizheva, I, Aphasizhev, R, Zhou, Z.H. 登録日 2023-04-13 公開日 2023-05-17 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (8.62 Å) 主引用文献 CryoEM reveals oligomeric isomers of a multienzyme complex and assembly mechanics. J Struct Biol X, 7, 2023
8SER	Cryo-EM Structure of RyR1 + Adenosine 分子名称: ADENOSINE, Glutathione S-transferase class-mu 26 kDa isozyme,Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 1, ... 著者 Cholak, S, Saville, J.W, Zhu, X, Berezuk, A.M, Tuttle, K.S, Haji-Ghassemi, O, Van Petegem, F, Subramaniam, S. 登録日 2023-04-10 公開日 2023-05-24 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (3.42 Å) 主引用文献 Allosteric modulation of ryanodine receptor RyR1 by nucleotide derivatives. Structure, 31, 2023
8SEP	Cryo-EM Structure of RyR1 + ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, Glutathione S-transferase class-mu 26 kDa isozyme,Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 1, ... 著者 Cholak, S, Saville, J.W, Zhu, X, Berezuk, A.M, Tuttle, K.S, Haji-Ghassemi, O, Van Petegem, F, Subramaniam, S. 登録日 2023-04-10 公開日 2023-05-24 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (3.57 Å) 主引用文献 Allosteric modulation of ryanodine receptor RyR1 by nucleotide derivatives. Structure, 31, 2023
8SEQ	Cryo-EM Structure of RyR1 + AMP 分子名称: ADENOSINE MONOPHOSPHATE, Glutathione S-transferase class-mu 26 kDa isozyme,Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 1, ... 著者 Cholak, S, Saville, J.W, Zhu, X, Berezuk, A.M, Tuttle, K.S, Haji-Ghassemi, O, Van Petegem, F, Subramaniam, S. 登録日 2023-04-10 公開日 2023-05-24 最終更新日 2023-07-19 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Allosteric modulation of ryanodine receptor RyR1 by nucleotide derivatives. Structure, 31, 2023
3S8V	Crystal structure of LRP6-Dkk1 complex 分子名称: Dickkopf-related protein 1, Low-density lipoprotein receptor-related protein 6 著者 Cheng, Z, Xu, W. 登録日 2011-05-31 公開日 2011-10-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Crystal structures of the extracellular domain of LRP6 and its complex with DKK1. Nat.Struct.Mol.Biol., 18, 2011

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