PDB: 224004 件ウェブページステータス検索Chemie searchBIRD

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1ZEX	CCG A-DNA 分子名称: 5'-D(*CP*CP*CP*GP*GP*CP*CP*GP*GP*G)-3' 著者 Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S. 登録日 2005-04-19 公開日 2005-05-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 How sequence defines structure: a crystallographic map of DNA structure and conformation. Proc.Natl.Acad.Sci.Usa, 102, 2005
1ZF2	Four-stranded DNA Holliday Junction (CCC) 分子名称: 5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3' 著者 Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S. 登録日 2005-04-19 公開日 2005-05-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 How sequence defines structure: a crystallographic map of DNA structure and conformation. Proc.Natl.Acad.Sci.Usa, 102, 2005
6VMB	Chloroplast ATP synthase (C1, CF1FO) 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ... 著者 Yang, J.-H, Williams, D, Kandiah, E, Fromme, P, Chiu, P.-L. 登録日 2020-01-27 公開日 2020-09-09 最終更新日 2020-09-16 実験手法 ELECTRON MICROSCOPY (5.23 Å) 主引用文献 Structural basis of redox modulation on chloroplast ATP synthase. Commun Biol, 3, 2020
6VOG	Chloroplast ATP synthase (O2, CF1) 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ... 著者 Yang, J.-H, Williams, D, Kandiah, E, Fromme, P, Chiu, P.-L. 登録日 2020-01-30 公開日 2020-09-09 最終更新日 2020-09-16 実験手法 ELECTRON MICROSCOPY (4.35 Å) 主引用文献 Structural basis of redox modulation on chloroplast ATP synthase. Commun Biol, 3, 2020
8ANO	Fucosylated mixed-chirality linear peptide FHP8 bound to the fucose binding lectin LecB PA-IIL from Pseudomonas aeruginosa at 1.3 Angstrom resolution. 分子名称: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, CALCIUM ION, Fucose-binding lectin PA-IIL, ... 著者 Personne, H, Stocker, A, Reymond, J.-L. 登録日 2022-08-05 公開日 2023-05-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.29 Å) 主引用文献 To Fold or Not to Fold: Diastereomeric Optimization of an alpha-Helical Antimicrobial Peptide. J.Med.Chem., 66, 2023
8AOO	Fucosylated mixed-chirality linear peptide FHP31 bound to the fucose binding lectin LecB PA-IIL from Pseudomonas aeruginosa at 1.2 Angstrom resolution. 分子名称: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, CALCIUM ION, Fucose-binding lectin PA-IIL, ... 著者 Personne, H, Stocker, A, Reymond, J.-L. 登録日 2022-08-08 公開日 2023-05-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 To Fold or Not to Fold: Diastereomeric Optimization of an alpha-Helical Antimicrobial Peptide. J.Med.Chem., 66, 2023
8ANR	Fucosylated alternate chirality linear peptide FHP30 bound to the fucose binding lectin LecB PA-IIL from Pseudomonas aeruginosa at 1.6 Angstrom resolution. 分子名称: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, CALCIUM ION, Fucose-binding lectin PA-IIL, ... 著者 Personne, H, Stocker, A, Reymond, J.-L. 登録日 2022-08-05 公開日 2023-05-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 To Fold or Not to Fold: Diastereomeric Optimization of an alpha-Helical Antimicrobial Peptide. J.Med.Chem., 66, 2023
8AN9	Fucosylated mixed-chirality linear peptide FHP5 bound to the fucose binding lectin LecB PA-IIL from Pseudomonas aeruginosa at 1.3 Angstrom resolution. 分子名称: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, CALCIUM ION, Fucose-binding lectin PA-IIL, ... 著者 Personne, H, Stocker, A, Reymond, J.-L. 登録日 2022-08-04 公開日 2023-05-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.273 Å) 主引用文献 To Fold or Not to Fold: Diastereomeric Optimization of an alpha-Helical Antimicrobial Peptide. J.Med.Chem., 66, 2023
6VMG	Chloroplast ATP synthase (O3, CF1FO) 分子名称: ATP synthase delta chain, chloroplastic, ATP synthase epsilon chain, ... 著者 Yang, J.-H, Williams, D, Kandiah, E, Fromme, P, Chiu, P.-L. 登録日 2020-01-27 公開日 2020-09-09 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (6.46 Å) 主引用文献 Structural basis of redox modulation on chloroplast ATP synthase. Commun Biol, 3, 2020
3AGZ	Crystal structure of human Hsp40 Hdj1 peptide-binding domain complexed with a C-terminal peptide of Hsp70 分子名称: DnaJ homolog subfamily B member 1, peptide of Heat shock cognate 71 kDa protein 著者 Suzuki, H, Noguchi, S, Satow, Y. 登録日 2010-04-12 公開日 2011-02-23 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Peptide-binding sites as revealed by the crystal structures of the human Hsp40 Hdj1 C-terminal domain in complex with the octapeptide from human Hsp70 Biochemistry, 49, 2010
8FC5	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.65A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ... 著者 Chen, C.-W, Syroegin, E.A, Svetlov, M.S, Polikanov, Y.S. 登録日 2022-12-01 公開日 2023-07-26 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural insights into the mechanism of overcoming Erm-mediated resistance by macrolides acting together with hygromycin-A. Nat Commun, 14, 2023
8FC4	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ... 著者 Chen, C.-W, Syroegin, E.A, Svetlov, M.S, Polikanov, Y.S. 登録日 2022-12-01 公開日 2023-07-26 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Structural insights into the mechanism of overcoming Erm-mediated resistance by macrolides acting together with hygromycin-A. Nat Commun, 14, 2023
8FC6	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.35A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ... 著者 Chen, C.-W, Syroegin, E.A, Svetlov, M.S, Polikanov, Y.S. 登録日 2022-12-01 公開日 2023-07-26 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural insights into the mechanism of overcoming Erm-mediated resistance by macrolides acting together with hygromycin-A. Nat Commun, 14, 2023
3AKJ	Crystal structure of A Helicobacter pylori proinflammatory kinase CtkA 分子名称: CtkA 著者 Kim, D.J, Suh, S.W. 登録日 2010-07-14 公開日 2010-12-01 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Helicobacter pylori proinflammatory protein up-regulates NF-kappaB as a cell-translocating Ser/Thr kinase Proc.Natl.Acad.Sci.USA, 107, 2010
8AHO	Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with cyanamide analogue 31 分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, NITRATE ION, ... 著者 de Munnik, M, Lang, P.A, Brem, J, Schofield, C.J. 登録日 2022-07-22 公開日 2023-08-02 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 High-throughput screen with the l,d-transpeptidase Ldt Mt2 of Mycobacterium tuberculosis reveals novel classes of covalently reacting inhibitors. Chem Sci, 14, 2023
8FC3	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.60A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ... 著者 Chen, C.-W, Syroegin, E.A, Svetlov, M.S, Polikanov, Y.S. 登録日 2022-12-01 公開日 2023-07-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural insights into the mechanism of overcoming Erm-mediated resistance by macrolides acting together with hygromycin-A. Nat Commun, 14, 2023
8AQ6	NanoLuc luciferase with bound furimamide in surface allosteric site 分子名称: CHLORIDE ION, GLYCEROL, N-(3-Benzyl-5-phenylpyrazin-2-yl)-2-(furan-2-yl)acetamide, ... 著者 Nemergut, M, Marek, M. 登録日 2022-08-11 公開日 2023-08-23 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Illuminating the mechanism and allosteric behavior of NanoLuc luciferase. Nat Commun, 14, 2023
8AQI	NanoLuc luciferase with bound coelenteramide in surface allosteric site 分子名称: CHLORIDE ION, N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE, NanoLuc luciferase, ... 著者 Nemergut, M, Marek, M. 登録日 2022-08-12 公開日 2023-08-23 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Illuminating the mechanism and allosteric behavior of NanoLuc luciferase. Nat Commun, 14, 2023
6W6P	MultiBody Refinement of 70S Ribosome from Enterococcus faecalis 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Jogl, G, Khayat, R. 登録日 2020-03-17 公開日 2020-10-14 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis. Sci Rep, 10, 2020
8FC2	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ... 著者 Chen, C.-W, Syroegin, E.A, Svetlov, M.S, Polikanov, Y.S. 登録日 2022-12-01 公開日 2023-07-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural insights into the mechanism of overcoming Erm-mediated resistance by macrolides acting together with hygromycin-A. Nat Commun, 14, 2023
1YQ9	Structure of the unready oxidized form of [NiFe] hydrogenase 分子名称: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, GLYCEROL, ... 著者 Volbeda, A, Martin, L, Cavazza, C, Matho, M, Faber, B.W, Roseboom, W, Albracht, S.P, Garcin, E, Rousset, M, Fontecilla-Camps, J.C. 登録日 2005-02-01 公開日 2005-04-19 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural differences between the ready and unready oxidized states of [NiFe] hydrogenases. J.Biol.Inorg.Chem., 10, 2005
8AKF	Human Sirt6 in complex with ADP-ribose and fragment 3-aminobenzamide 分子名称: 1,2-ETHANEDIOL, 3-aminobenzamide, CHLORIDE ION, ... 著者 You, W, Steegborn, C. 登録日 2022-07-29 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Development of novel Sirtuin 6 inhibitors and activators based on a protein crystallography-based fragment screen To Be Published
1YS4	Structure of Aspartate-Semialdehyde Dehydrogenase from Methanococcus jannaschii 分子名称: Aspartate-semialdehyde dehydrogenase, MALONIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Faehnle, C.R, Ohren, J.F, Viola, R.E. 登録日 2005-02-07 公開日 2005-11-01 最終更新日 2015-04-29 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 A New Branch in the Family: Structure of Aspartate-beta-semialdehyde Dehydrogenase from Methanococcus jannaschii J.Mol.Biol., 353, 2005
8ANC	14-3-3 sigma sirtuin-3 phospho-peptide complex 分子名称: 14-3-3 protein sigma, CALCIUM ION, CHLORIDE ION, ... 著者 Weyand, M, Steegborn, C, Debbert, L. 登録日 2022-08-05 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.11 Å) 主引用文献 14-3-3 sigma sirtuin-3 phospho-peptide complex To Be Published
8ANB	14-3-3 sigma sirtuin-1 phospho-peptide complex 分子名称: 14-3-3 protein sigma, CHLORIDE ION, MAGNESIUM ION, ... 著者 Weyand, M, Steegborn, C, Debbert, L. 登録日 2022-08-05 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 14-3-3 sigma sirtuin-1 phospho-peptide complex To Be Published

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