PDB: 35881 件ウェブページステータス検索Chemie searchBIRD

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7ZYT	Crystal structure of the I318T pathogenic variant of the human dihydrolipoamide dehydrogenase 分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Dihydrolipoyl dehydrogenase, ... 著者 Nemes-Nikodem, E, Szabo, E, Vass, K.R, Lennartz, F, Nagy, B, Torocsik, B, Weiss, M.S, Adam-Vizi, V, Ambrus, A. 登録日 2022-05-25 公開日 2023-06-14 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.892 Å) 主引用文献 Structural and Biochemical Investigation of Selected Pathogenic Mutants of the Human Dihydrolipoamide Dehydrogenase. Int J Mol Sci, 24, 2023
8HZU	Crystal structure of AtHPPD-XHD complex 分子名称: (5R)-2-butanimidoyl-5-[(2R)-2-ethylsulfanylpropyl]-3-oxidanyl-cyclohex-2-en-1-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION 著者 Dong, J, Lin, H.-Y, Yang, G.-F. 登録日 2023-01-09 公開日 2023-12-20 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.796 Å) 主引用文献 Crystal structure of AtHPPD-XHD complex To Be Published
8A8L	Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with a heme-coordinated fragment 分子名称: 6-methoxy-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indole, Cytochrome P450 protein, GLYCEROL, ... 著者 Snee, M, Katariya, M, Levy, C. 登録日 2022-06-23 公開日 2023-07-05 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with a heme-coordinated fragment To Be Published
6LD0	Structure of Bifidobacterium dentium beta-glucuronidase complexed with C6-hexyl uronic isofagomine 分子名称: (2~{S},3~{S},4~{R},5~{R})-2-hexyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid, LacZ1 Beta-galactosidase 著者 Lin, H.-Y, Hsieh, T.-J, Lin, C.-H. 登録日 2019-11-20 公開日 2021-01-27 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.901 Å) 主引用文献 Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity. Commun Biol, 4, 2021
7L3J	T4 Lysozyme L99A - benzylacetate - RT 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-MERCAPTOETHANOL, CHLORIDE ION, ... 著者 Fischer, M, Bradford, S.Y.C. 登録日 2020-12-17 公開日 2021-10-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Temperature artifacts in protein structures bias ligand-binding predictions. Chem Sci, 12, 2021
6AWF	Escherichia coli quinol:fumarate reductase crystallized without dicarboxylate 分子名称: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Iverson, T.M. 登録日 2017-09-05 公開日 2017-12-06 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 New crystal forms of the integral membrane Escherichia coli quinol:fumarate reductase suggest that ligands control domain movement. J. Struct. Biol., 202, 2018
8I0Y	Crystal structure of AtHPPD-Y191713 complex 分子名称: 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION, ethyl 5-methyl-6-[(2-methyl-3-oxidanylidene-1H-pyrazol-4-yl)carbonyl]-4-oxidanylidene-3-phenyl-quinazoline-2-carboxylate 著者 Dong, J, Lin, H.-Y, Yang, G.-F. 登録日 2023-01-11 公開日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.792 Å) 主引用文献 Crystal structure of AtHPPD-Y191713 complex To Be Published
5LKS	Structure-function insights reveal the human ribosome as a cancer target for antibiotics 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ... 著者 Myasnikov, A.G, Natchiar, S.K, Nebout, M, Hazemann, I, Imbert, V, Khatter, H, Peyron, J.-F, Klaholz, B.P. 登録日 2016-07-23 公開日 2017-04-26 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure-function insights reveal the human ribosome as a cancer target for antibiotics. Nat Commun, 7, 2016
5LOM	Crystal structure of the PBP SocA from Agrobacterium tumefaciens C58 in complex with DFG at 1.5 A resolution 分子名称: 1,2-ETHANEDIOL, Deoxyfructosyl-amino Acid Transporter Periplasmic Binding Protein, Deoxyfructosylglutamine 著者 Marty, L, Vigouroux, A, Morera, S. 登録日 2016-08-09 公開日 2016-09-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural Basis for High Specificity of Amadori Compound and Mannopine Opine Binding in Bacterial Pathogens. J.Biol.Chem., 291, 2016
7L3E	T4 Lysozyme L99A - 3-iodotoluene - cryo 分子名称: 1-iodo-3-methylbenzene, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-MERCAPTOETHANOL, ... 著者 Fischer, M, Bradford, S.Y.C. 登録日 2020-12-17 公開日 2021-10-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.13 Å) 主引用文献 Temperature artifacts in protein structures bias ligand-binding predictions. Chem Sci, 12, 2021
8A6W	Crystal structure of CYP142 from Mycobacterium tuberculosis in complex with cholestenone 分子名称: (8ALPHA,9BETA)-CHOLEST-4-EN-3-ONE, PROTOPORPHYRIN IX CONTAINING FE, Steroid C26-monooxygenase 著者 Snee, M, Amadi, C, Levy, C. 登録日 2022-06-20 公開日 2023-07-05 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Crystal structure of CYP142 from Mycobacterium tuberculosis in complex with cholestenone To Be Published
1F2I	COCRYSTAL STRUCTURE OF SELECTED ZINC FINGER DIMER BOUND TO DNA 分子名称: 5'-D(*AP*TP*GP*GP*GP*CP*GP*CP*GP*CP*CP*CP*AP*T)-3', FUSION OF N-TERMINAL 17-MER PEPTIDE EXTENSION TO ZIF12, ZINC ION 著者 Wang, B.S, Grant, R.A, Pabo, C.O. 登録日 2000-05-25 公開日 2001-09-14 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Selected peptide extension contacts hydrophobic patch on neighboring zinc finger and mediates dimerization on DNA. Nat.Struct.Biol., 8, 2001
8I2S	Crystal structure of AtHPPD-Y18979 complex 分子名称: 1,5-dimethyl-3-(naphthalen-2-ylmethyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION 著者 Dong, J, Lin, H.-Y, Yang, G.-F. 登録日 2023-01-15 公開日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.592 Å) 主引用文献 Crystal structure of AtHPPD-Y18979 complex To Be Published
7L3A	T4 Lysozyme L99A - toluene - cryo 分子名称: Endolysin, TOLUENE 著者 Fischer, M, Bradford, S.Y.C. 登録日 2020-12-17 公開日 2021-10-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.11 Å) 主引用文献 Temperature artifacts in protein structures bias ligand-binding predictions. Chem Sci, 12, 2021
3RWT	Crystal structure of circular permutated Red Fluorescent Protein mKate(cp 154-153) 分子名称: Fluorescent protein FP480,Fluorescent protein FP480, MAGNESIUM ION 著者 Wang, Q, Sondermann, H. 登録日 2011-05-09 公開日 2011-06-15 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Circular permutation of red fluorescent proteins. Plos One, 6, 2011
7L39	T4 Lysozyme L99A - toluene - RT 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-MERCAPTOETHANOL, CHLORIDE ION, ... 著者 Fischer, M, Bradford, S.Y.C. 登録日 2020-12-17 公開日 2021-10-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Temperature artifacts in protein structures bias ligand-binding predictions. Chem Sci, 12, 2021
6TE3	Crystal Structure of full-length Human Lysyl Hydroxylase LH3 - Cocrystal with Fe2+, Mn2+, UDP 分子名称: 2-OXOGLUTARIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Chiapparino, A, De Giorgi, F, Scietti, L, Faravelli, S, Roscioli, T, Forneris, F. 登録日 2019-11-11 公開日 2021-05-19 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Identification of Regulatory Molecular 'Hot Spots' for LH/PLOD Collagen Glycosyltransferase Activity Int J Mol Sci, 2023
6KQ9	A long chain secondary alcohol dehydrogenase of Micrococcus luteus 分子名称: 3-hydroxybutyryl-CoA dehydrogenase 著者 Kim, H.J, Kim, J.S. 登録日 2019-08-16 公開日 2020-08-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.251 Å) 主引用文献 Cofactor specificity engineering of a long-chain secondary alcohol dehydrogenase from Micrococcus luteus for redox-neutral biotransformation of fatty acids. Chem.Commun.(Camb.), 55, 2019
7L38	T4 Lysozyme L99A - Apo - cryo 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-MERCAPTOETHANOL, CHLORIDE ION, ... 著者 Fischer, M, Bradford, S.Y.C. 登録日 2020-12-17 公開日 2021-10-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.33 Å) 主引用文献 Temperature artifacts in protein structures bias ligand-binding predictions. Chem Sci, 12, 2021
1F4I	SOLUTION STRUCTURE OF THE HHR23A UBA(2) MUTANT P333E, DEFICIENT IN BINDING THE HIV-1 ACCESSORY PROTEIN VPR 分子名称: UV EXCISION REPAIR PROTEIN PROTEIN RAD23 HOMOLOG A 著者 Withers-Ward, E.S, Mueller, T.D, Chen, I.S, Feigon, J. 登録日 2000-06-07 公開日 2000-12-20 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Biochemical and structural analysis of the interaction between the UBA(2) domain of the DNA repair protein HHR23A and HIV-1 Vpr. Biochemistry, 39, 2000
7L3B	T4 Lysozyme L99A - iodobenzene - RT 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-MERCAPTOETHANOL, CHLORIDE ION, ... 著者 Fischer, M, Bradford, S.Y.C. 登録日 2020-12-17 公開日 2021-10-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.27 Å) 主引用文献 Temperature artifacts in protein structures bias ligand-binding predictions. Chem Sci, 12, 2021
6TEC	Crystal Structure of full-length Human Lysyl Hydroxylase LH3 - Cocrystal with Fe2+, Mn2+, UDP-Xylose 分子名称: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Chiapparino, A, De Giorgi, F, Scietti, L, Faravelli, S, Roscioli, T, Forneris, F. 登録日 2019-11-11 公開日 2021-05-19 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Identification of Regulatory Molecular 'Hot Spots' for LH/PLOD Collagen Glycosyltransferase Activity Int J Mol Sci, 2023
5LUH	AadA E87Q in complex with ATP, calcium and streptomycin 分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ... 著者 Stern, A.L, Van der Verren, S.E, Selmer, M. 登録日 2016-09-08 公開日 2018-01-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Structural mechanism of AadA, a dual-specificity aminoglycoside adenylyltransferase fromSalmonella enterica. J.Biol.Chem., 293, 2018
7L3G	T4 Lysozyme L99A - 4-iodotoluene - cryo 分子名称: 1-iodo-4-methylbenzene, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-MERCAPTOETHANOL, ... 著者 Fischer, M, Bradford, S.Y.C. 登録日 2020-12-17 公開日 2021-10-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.27 Å) 主引用文献 Temperature artifacts in protein structures bias ligand-binding predictions. Chem Sci, 12, 2021
6TES	Crystal Structure of full-length Human Lysyl Hydroxylase LH3 - Cocrystal with Fe2+, Mn2+, UDP-Glucuronic Acid 分子名称: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Chiapparino, A, De Giorgi, F, Scietti, L, Faravelli, S, Roscioli, T, Forneris, F. 登録日 2019-11-12 公開日 2021-05-19 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Identification of Regulatory Molecular 'Hot Spots' for LH/PLOD Collagen Glycosyltransferase Activity Int J Mol Sci, 2023

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