PDB: 55698 件ウェブページステータス検索Chemie searchBIRD

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3MDG	Crystal Structure of the 25kDa Subunit of Human Cleavage factor Im in complex with RNA UUGUAU 分子名称: Cleavage and polyadenylation specificity factor subunit 5, GLYCEROL, RNA (5'-R(*UP*UP*GP*UP*AP*U)-3') 著者 Yang, Q, Gilmartin, G.M, Doublie, S. 登録日 2010-03-30 公開日 2010-06-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Structural basis of UGUA recognition by the Nudix protein CFI(m)25 and implications for a regulatory role in mRNA 3' processing. Proc.Natl.Acad.Sci.USA, 107, 2010
3VGL	Crystal structure of a ROK family glucokinase from Streptomyces griseus in complex with glucose and AMPPNP 分子名称: Glucokinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SODIUM ION, ... 著者 Miyazono, K, Tabei, N, Morita, S, Ohnishi, Y, Horinouchi, S, Tanokura, M. 登録日 2011-08-15 公開日 2011-12-07 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Substrate recognition mechanism and substrate-dependent conformational changes of an ROK family glucokinase from Streptomyces griseus J.Bacteriol., 194, 2012
5AWE	Crystal structure of a hypothetical protein, TTHA0829 from Thermus thermophilus HB8, composed of cystathionine-beta-synthase (CBS) and aspartate-kinase chorismate-mutase tyrA (ACT) domains 分子名称: Putative acetoin utilization protein, acetoin dehydrogenase 著者 Nakabayashi, M, Shibata, N, Kanagawa, M, Nakagawa, N, Kuramitsu, S, Higuchi, Y. 登録日 2015-07-03 公開日 2016-05-18 最終更新日 2020-02-26 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Crystal structure of a hypothetical protein, TTHA0829 from Thermus thermophilus HB8, composed of cystathionine-beta-synthase (CBS) and aspartate-kinase chorismate-mutase tyrA (ACT) domains. Extremophiles, 20, 2016
1NYJ	The closed state structure of M2 protein H+ channel by solid state NMR spectroscopy 分子名称: Matrix protein M2 著者 Nishimura, K, Kim, S, Zhang, L, Cross, T.A. 登録日 2003-02-12 公開日 2003-03-25 最終更新日 2024-05-22 実験手法 SOLID-STATE NMR 主引用文献 The closed state of a H+ channel helical bundle combining precise orientational and distance restraints from solid state NMR Biochemistry, 41, 2002
1OHK	HUMAN DIHYDROFOLATE REDUCTASE, ORTHORHOMBIC (P21 21 21) CRYSTAL FORM 分子名称: DIHYDROFOLATE REDUCTASE, N-(4-CARBOXY-4-{4-[(2,4-DIAMINO-PTERIDIN-6-YLMETHYL)-AMINO]-BENZOYLAMINO}-BUTYL)-PHTHALAMIC ACID, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Cody, V, Galitsky, N, Luft, J.R, Pangborn, W. 登録日 1997-09-17 公開日 1998-05-27 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Comparison of two independent crystal structures of human dihydrofolate reductase ternary complexes reduced with nicotinamide adenine dinucleotide phosphate and the very tight-binding inhibitor PT523. Biochemistry, 36, 1997
5IRU	Crystal structure of avidin in complex with 1-biotinylpyrene 分子名称: 1-biotinylpyrene, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin 著者 Strzelczyk, P, Bujacz, G. 登録日 2016-03-14 公開日 2016-10-12 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Characterization of the Avidin Interactions with Fluorescent Pyrene-Conjugates: 1-Biotinylpyrene and 1-Desthiobiotinylpyrene. Molecules, 21, 2016
2M5U	NMR structure of the P4 hairpin of the CPEB3 ribozyme 分子名称: RNA_(5'-R(*GP*GP*CP*AP*GP*AP*UP*UP*CP*UP*GP*GP*UP*GP*AP*AP*UP*CP*UP*GP*CP*C)-3') 著者 Skilandat, M, Rowinska-Zyrek, M, Sigel, R.K.O. 登録日 2013-03-08 公開日 2014-04-02 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution structure and metal ion binding sites of the human CPEB3 ribozyme's P4 domain. J.Biol.Inorg.Chem., 19, 2014
3NZP	Crystal Structure of the Biosynthetic Arginine decarboxylase SpeA from Campylobacter jejuni, Northeast Structural Genomics Consortium Target BR53 分子名称: Arginine decarboxylase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION 著者 Forouhar, F, Lew, S, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Belote, R.L, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG) 登録日 2010-07-16 公開日 2010-09-01 最終更新日 2012-02-22 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structures of bacterial biosynthetic arginine decarboxylases. Acta Crystallogr.,Sect.F, 66, 2010
5B4T	Crystal structure of D-3-hydroxybutyrate dehydrogenase from Alcaligenes faecalis complexed with NAD+ and a substrate D-3-hydroxybutyrate 分子名称: (3R)-3-hydroxybutanoic acid, 3-hydroxybutyrate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Kanazawa, H, Tsunoda, M, Hoque, M.M, Suzuki, K, Yamamoto, T, Takenaka, A. 登録日 2016-04-19 公開日 2016-08-17 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.19 Å) 主引用文献 Structural insights into the catalytic reaction trigger and inhibition of D-3-hydroxybutyrate dehydrogenase Acta Crystallogr.,Sect.F, 72, 2016
6J7U	Crystal structure of blue fluorescent protein from metagenomic library in complex with NADPH 分子名称: Blue fluorescent protein, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Seo, P.W, Kim, J.S. 登録日 2019-01-18 公開日 2019-09-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.302 Å) 主引用文献 Structure-Guided Generation of a Redox-Independent Blue Fluorescent Protein from mBFP. J.Mol.Biol., 431, 2019
5B4U	Crystal structure of D-3-hydroxybutyrate dehydrogenase from Alcaligenes faecalis complexed with NAD+ and an inhibitor malonate 分子名称: 3-hydroxybutyrate dehydrogenase, CHLORIDE ION, MALONIC ACID, ... 著者 Kanazawa, H, Tsunoda, M, Hoque, M.M, Suzuki, K, Yamamoto, T, Takenaka, A. 登録日 2016-04-19 公開日 2016-08-17 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structural insights into the catalytic reaction trigger and inhibition of D-3-hydroxybutyrate dehydrogenase Acta Crystallogr.,Sect.F, 72, 2016
5BSZ	X-ray structure of the sugar N-methyltransferase KedS8 from Streptoalloteichus sp ATCC 53650 分子名称: 1,2-ETHANEDIOL, N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ... 著者 Thoden, J.B, Delvaux, N.A, Holden, H.M. 登録日 2015-06-02 公開日 2015-07-29 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular architecture of KedS8, a sugar N-methyltransferase from Streptoalloteichus sp. ATCC 53650. Protein Sci., 24, 2015
5BUA	Lysine 120-acetylated P53 DNA binding domain in a complex with DNA. 分子名称: Cellular tumor antigen p53, DNA (5'-D(P*GP*GP*AP*CP*AP*TP*GP*TP*CP*C)-3'), ZINC ION 著者 Arbely, E, Vainer, R. 登録日 2015-06-03 公開日 2016-07-06 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.812 Å) 主引用文献 Structural Basis for p53 Lys120-Acetylation-Dependent DNA-Binding Mode. J.Mol.Biol., 428, 2016
3NSE	BOVINE ENOS, H4B-FREE, SEITU COMPLEX 分子名称: ACETATE ION, ARGININE, CACODYLATE ION, ... 著者 Raman, C.S, Li, H, Martasek, P, Kral, V, Masters, B.S.S, Poulos, T.L. 登録日 1998-09-23 公開日 1999-05-18 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of constitutive endothelial nitric oxide synthase: a paradigm for pterin function involving a novel metal center. Cell(Cambridge,Mass.), 95, 1998
2ZOY	The multi-drug binding transcriptional repressor CgmR (CGL2612 protein) from C.glutamicum 分子名称: GLYCEROL, Transcriptional regulator 著者 Itou, H, Yao, M, Watanabe, N, Tanaka, I. 登録日 2008-06-20 公開日 2008-07-08 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The CGL2612 protein from Corynebacterium glutamicum is a drug resistance-related transcriptional repressor: structural and functional analysis of a newly identified transcription factor from genomic DNA analysis J.Biol.Chem., 280, 2005
3O48	Crystal structure of fission protein Fis1 from Saccharomyces cerevisiae 分子名称: Mitochondria fission 1 protein 著者 Tooley, J.E, Khangulov, V, Heroux, A, Bosch, J, Hill, R.B. 登録日 2010-07-26 公開日 2011-08-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 The 1.75 Angstrom resolution structure of fission protein Fis1 from Saccharomyces cerevisiae reveals elusive interactions of the autoinhibitory domain Acta Crystallogr.,Sect.F, 67, 2011
3O83	Structure of BasE N-terminal domain from Acinetobacter baumannii bound to 2-(4-n-dodecyl-1,2,3-triazol-1-yl)-5'-O-[N-(2-hydroxybenzoyl)sulfamoyl]adenosine 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(4-dodecyl-1H-1,2,3-triazol-1-yl)-5'-O-{[(2-hydroxyphenyl)carbonyl]sulfamoyl}adenosine, ... 著者 Drake, E.J, Duckworth, B.P, Neres, J, Aldrich, C.C, Gulick, A.M. 登録日 2010-08-02 公開日 2010-10-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Biochemical and structural characterization of bisubstrate inhibitors of BasE, the self-standing nonribosomal peptide synthetase adenylate-forming enzyme of acinetobactin synthesis. Biochemistry, 49, 2010
5J6F	Crystal structure of DAH7PS-CM complex from Geobacillus sp. with prephenate 分子名称: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, chorismate mutase-isozyme 3, MANGANESE (II) ION, ... 著者 Nazmi, A.R, Othman, M, Lang, E.J.M, Bai, Y, Allison, T.M, Panjkar, S, Arcus, V.L, Parker, E.J. 登録日 2016-04-04 公開日 2016-09-07 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Interdomain Conformational Changes Provide Allosteric Regulation en Route to Chorismate. J. Biol. Chem., 291, 2016
1WOS	Crystal Structure of T-protein of the Glycine Cleavage System 分子名称: Aminomethyltransferase 著者 Lee, H.H, Kim, D.J, Ahn, H.J, Ha, J.Y, Suh, S.W. 登録日 2004-08-24 公開日 2004-09-07 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Crystal Structure of T-protein of the Glycine Cleavage System: Cofactor binding, insights into H-protein recognition, and molecular basis for understanding nonketotic hyperglycinemia J.Biol.Chem., 279, 2004
3O84	Structure of BasE N-terminal domain from Acinetobacter baumannii bound to 6-phenyl-1-(pyridin-4-ylmethyl)-1H-pyrazolo[3,4-b]pyridine-4-carboxylic acid. 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 6-phenyl-1-(pyridin-4-ylmethyl)-1H-pyrazolo[3,4-b]pyridine-4-carboxylic acid, ... 著者 Drake, E.J, Duckworth, B.P, Neres, J, Aldrich, C.C, Gulick, A.M. 登録日 2010-08-02 公開日 2010-10-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Biochemical and structural characterization of bisubstrate inhibitors of BasE, the self-standing nonribosomal peptide synthetase adenylate-forming enzyme of acinetobactin synthesis. Biochemistry, 49, 2010
3O82	Structure of BasE N-terminal domain from Acinetobacter baumannii bound to 5'-O-[N-(2,3-dihydroxybenzoyl)sulfamoyl] adenosine 分子名称: 5'-O-{[(2,3-dihydroxyphenyl)carbonyl]sulfamoyl}adenosine, CALCIUM ION, Peptide arylation enzyme 著者 Drake, E.J, Duckworth, B.P, Neres, J, Aldrich, C.C, Gulick, A.M. 登録日 2010-08-02 公開日 2010-10-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Biochemical and structural characterization of bisubstrate inhibitors of BasE, the self-standing nonribosomal peptide synthetase adenylate-forming enzyme of acinetobactin synthesis. Biochemistry, 49, 2010
6V38	Cryo-EM structure of Ca2+-bound hsSlo1 channel 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CALCIUM ION, CHOLESTEROL, ... 著者 Tao, X, MacKinnon, R. 登録日 2019-11-25 公開日 2019-12-25 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Molecular structures of the human Slo1 K + channel in complex with beta 4. Elife, 8, 2019
6JKU	Crystal structure of N-acetylglucosamine-6-phosphate deacetylase from Pasteurella Multocida 分子名称: 1,2-ETHANEDIOL, GLYCEROL, N-acetylglucosamine-6-phosphate deacetylase, ... 著者 Manjunath, L, Bose, S, Subramanian, R. 登録日 2019-03-01 公開日 2020-03-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Quaternary variations in the structural assembly of N-acetylglucosamine-6-phosphate deacetylase from Pasteurella multocida. Proteins, 2020
5O4V	P.vivax NMT with aminomethylindazole and quinoline inhibitors bound 分子名称: 1-[5-(4-fluoranyl-2-methyl-phenyl)-1~{H}-indazol-3-yl]-~{N},~{N}-dimethyl-methanamine, 2-oxopentadecyl-CoA, CHLORIDE ION, ... 著者 Brannigan, J.A, Wilkinson, A.J. 登録日 2017-05-31 公開日 2018-05-16 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Fragment-derived inhibitors of human N-myristoyltransferase block capsid assembly and replication of the common cold virus. Nat Chem, 10, 2018
5JYF	Structures of Streptococcus agalactiae GBS GAPDH in different enzymatic states 分子名称: Glyceraldehyde-3-phosphate dehydrogenase 著者 Schormann, N, Chattopadhyay, D. 登録日 2016-05-13 公開日 2016-12-21 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.62 Å) 主引用文献 Crystal Structures of Group B Streptococcus Glyceraldehyde-3-Phosphate Dehydrogenase: Apo-Form, Binary and Ternary Complexes. PLoS ONE, 11, 2016

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