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3GZ8
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Cocrystal structure of NUDIX domain of Shewanella oneidensis NrtR complexed with ADP ribose
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, MutT/nudix family protein
著者Huang, N, Zhang, H.
登録日2009-04-06
公開日2009-06-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structure and function of an ADP-ribose-dependent transcriptional regulator of NAD metabolism
Structure, 17, 2009
3GZ5
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Crystal structure of Shewanella oneidensis NrtR
分子名称: MutT/nudix family protein, SODIUM ION
著者Huang, N, Zhang, H.
登録日2009-04-06
公開日2009-06-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and function of an ADP-ribose-dependent transcriptional regulator of NAD metabolism
Structure, 17, 2009
1X84
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IPP isomerase (wt) reacted with (S)-bromohydrine of IPP
分子名称: (S)-4-BROMO-3-HYDROXY-3-METHYLBUTYL DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION, ...
著者Wouters, J, Oldfield, E.
登録日2004-08-17
公開日2005-01-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献A Crystallographic Investigation of Phosphoantigen Binding to Isopentenyl Pyrophosphate/Dimethylallyl Pyrophosphate Isomerase
J.Am.Chem.Soc., 127, 2005
3GWY
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BU of 3gwy by Molmil
Crystal structure of putative CTP pyrophosphohydrolase from Bacteroides fragilis
分子名称: Putative CTP pyrophosphohydrolase
著者Patskovsky, Y, Romero, R, Gilmore, M, Do, J, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-04-01
公開日2009-04-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Ctp Pyrophosphohydrolase from Bacteroides fragilis
To be Published
3GRN
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BU of 3grn by Molmil
CRYSTAL STRUCTURE OF MUTT PROTEIN FROM Methanosarcina mazei Go1
分子名称: GLYCEROL, MutT related protein
著者Patskovsky, Y, Romero, R, Gilmore, M, Do, J, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-03-26
公開日2009-04-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献CRYSTAL STRUCTURE OF MUTT PROTEIN FROM Methanosarcina mazei Go1
To be Published
1X83
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Y104F IPP isomerase reacted with (S)-bromohydrine of IPP
分子名称: (S)-4-BROMO-3-HYDROXY-3-METHYLBUTYL DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION, ...
著者Wouters, J, Oldfield, E.
登録日2004-08-17
公開日2005-01-25
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A Crystallographic Investigation of Phosphoantigen Binding to Isopentenyl Pyrophosphate/Dimethylallyl Pyrophosphate Isomerase
J.Am.Chem.Soc., 127, 2005
3H95
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BU of 3h95 by Molmil
Crystal structure of the NUDIX domain of NUDT6
分子名称: CITRATE ANION, GLYCEROL, Nucleoside diphosphate-linked moiety X motif 6
著者Tresaugues, L, Moche, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kotyenova, T, Kotzch, A, Nielsen, T.K, Nyman, T, Persson, C, Sagemark, J, Schueler, H, Schutz, P, Siponen, M.I, Svensson, L, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Welin, M, Wisniewska, M, Nordlund, P, Structural Genomics Consortium (SGC)
登録日2009-04-30
公開日2009-07-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of the NUDIX domain of NUDT6
To be Published
3GZ6
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Crystal structure of Shewanella oneidensis NrtR complexed with a 27mer DNA
分子名称: DNA (27-MER), MutT/nudix family protein, SODIUM ION
著者Huang, N, Zhang, H.
登録日2009-04-06
公開日2009-06-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献Structure and function of an ADP-ribose-dependent transcriptional regulator of NAD metabolism
Structure, 17, 2009
2ICK
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Human isopentenyl diphophate isomerase complexed with substrate analog
分子名称: DIMETHYLALLYL DIPHOSPHATE, Isopentenyl-diphosphate delta isomerase, MANGANESE (II) ION
著者Zheng, W, Bartlam, M, Rao, Z.
登録日2006-09-12
公開日2007-03-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献The crystal structure of human isopentenyl diphosphate isomerase at 1.7 A resolution reveals its catalytic mechanism in isoprenoid biosynthesis
J.Mol.Biol., 366, 2007
2ICJ
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BU of 2icj by Molmil
The crystal structure of human isopentenyl diphophate isomerase
分子名称: Isopentenyl-diphosphate delta isomerase, MAGNESIUM ION, SULFATE ION
著者Zheng, W, Bartlam, M, Rao, Z.
登録日2006-09-12
公開日2007-03-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The crystal structure of human isopentenyl diphosphate isomerase at 1.7 A resolution reveals its catalytic mechanism in isoprenoid biosynthesis
J.Mol.Biol., 366, 2007
1XSB
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BU of 1xsb by Molmil
Structure of the nudix enzyme AP4A hydrolase from homo sapiens (E63A mutant) in complex with ATP. No ATP restraints included
分子名称: Bis(5'-nucleosyl)-tetraphosphatase
著者Swarbrick, J.D, Buyya, S, Gunawardana, D, Gayler, K.R, McLennan, A.G, Gooley, P.R.
登録日2004-10-18
公開日2004-12-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure and Substrate-binding Mechanism of Human Ap4A Hydrolase
J.Biol.Chem., 280, 2005
2JVB
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Solution Structure of Catalytic Domain of yDcp2
分子名称: mRNA-decapping enzyme subunit 2
著者Deshmukh, M, Gross, J.
登録日2007-09-16
公開日2008-03-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献mRNA Decapping Is Promoted by an RNA-Binding Channel in Dcp2.
Mol.Cell, 29, 2008
3I7V
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BU of 3i7v by Molmil
Crystal structure of AP4A hydrolase complexed with AP4A (ATP) (aq_158) from Aquifex aeolicus Vf5
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, AP4A hydrolase, ...
著者Jeyakanthan, J, Kanaujia, S.P, Nakagawa, N, Sekar, K, Kuramitsu, S, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-07-09
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Free and ATP-bound structures of Ap(4)A hydrolase from Aquifex aeolicus V5
Acta Crystallogr.,Sect.D, 66, 2010
3I9X
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Crystal structure of a mutT/nudix family protein from Listeria innocua
分子名称: GLYCEROL, mutT/nudix family protein
著者Bonanno, J.B, Gilmore, M, Bain, K.T, Miller, S, Romero, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-07-13
公開日2009-07-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a mutT/nudix family protein from Listeria innocua
To be Published
2I8T
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BU of 2i8t by Molmil
GDP-mannose mannosyl hydrolase-calcium-GDP-mannose complex
分子名称: CALCIUM ION, GDP-mannose mannosyl hydrolase, GLYCEROL, ...
著者Zou, Y, Li, C, Brunzelle, J.S, Nair, S.K.
登録日2006-09-03
公開日2007-06-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Molecular basis for substrate selectivity and specificity by an LPS biosynthetic enzyme
Biochemistry, 46, 2007
3I7U
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BU of 3i7u by Molmil
Crystal structure of AP4A hydrolase (aq_158) from Aquifex aeolicus VF5
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AP4A hydrolase, ...
著者Jeyakanthan, J, Kanaujia, S.P, Nakagawa, N, Sekar, K, Kuramitsu, S, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-07-09
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Free and ATP-bound structures of Ap(4)A hydrolase from Aquifex aeolicus V5
Acta Crystallogr.,Sect.D, 66, 2010
2I6K
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BU of 2i6k by Molmil
Crystal structure of human type I IPP isomerase complexed with a substrate analog
分子名称: ACETIC ACID, AMINOETHANOLPYROPHOSPHATE, Isopentenyl-diphosphate delta-isomerase 1, ...
著者Zhang, C, Wei, Z, Gong, W.
登録日2006-08-29
公開日2007-06-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of human IPP isomerase: new insights into the catalytic mechanism
J.Mol.Biol., 366, 2007
2A8Q
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2.6 Angstrom Crystal Structure of the Complex Between the Nuclear SnoRNA Decapping Nudix Hydrolase X29 and Manganese in the Presence of 7-methyl-GDP
分子名称: MANGANESE (II) ION, PYROPHOSPHATE 2-, U8 snoRNA-binding protein X29
著者Scarsdale, J.N, Peculis, B.A, Wright, H.T.
登録日2005-07-08
公開日2006-03-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of U8 snoRNA decapping nudix hydrolase, X29, and its metal and cap complexes
Structure, 14, 2006
2KDV
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Solution structure of RNA Pyrophosphohydrolase RppH from Escherichia coli
分子名称: RNA pyrophosphohydrolase
著者Bi, Y, Li, H, Jin, C.
登録日2009-01-19
公開日2010-01-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of RNA pyrophosphohydrolase RppH from Escherichia coli
To be Published
2A8S
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2.45 Angstrom Crystal Structure of the Complex Between the Nuclear SnoRNA Decapping Nudix Hydrolase X29, Manganese and GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, U8 snoRNA-binding protein X29
著者Scarsdale, J.N, Peculis, B.A, Wright, H.T.
登録日2005-07-08
公開日2006-03-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structures of U8 snoRNA decapping nudix hydrolase, X29, and its metal and cap complexes
Structure, 14, 2006
2A8R
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2.45 Angstrom Crystal Structure of the Complex Between the Nuclear SnoRNA Decapping Nudix Hydrolase X29 and Manganese in the Presence of 7-methyl-GTP
分子名称: MANGANESE (II) ION, PYROPHOSPHATE 2-, U8 snoRNA-binding protein X29
著者Scarsdale, J.N, Peculis, B.A, Wright, H.T.
登録日2005-07-08
公開日2006-03-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structures of U8 snoRNA decapping nudix hydrolase, X29, and its metal and cap complexes
Structure, 14, 2006
2GT4
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Crystal Structure of the Y103F mutant of the GDP-mannose mannosyl hydrolase in complex with GDP-mannose and MG+2
分子名称: GDP-mannose mannosyl hydrolase, GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, MAGNESIUM ION, ...
著者Gabelli, S.B, Bianchet, M.A, Azurmendi, H.F, Mildvan, A.S, Amzel, L.A.
登録日2006-04-27
公開日2006-12-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献X-ray, NMR, and mutational studies of the catalytic cycle of the GDP-mannose mannosyl hydrolase reaction.
Biochemistry, 45, 2006
1XSA
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BU of 1xsa by Molmil
Structure of the nudix enzyme AP4A hydrolase from homo sapiens (E63A mutant)
分子名称: Bis(5'-nucleosyl)-tetraphosphatase
著者Swarbrick, J.D, Buyya, S, Gunawardana, D, Gayler, K.R, McLennan, A.G, Gooley, P.R.
登録日2004-10-18
公開日2004-12-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure and Substrate-binding Mechanism of Human Ap4A Hydrolase
J.Biol.Chem., 280, 2005
2GT2
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Structure of the E. coli GDP-mannose mannosyl hydrolase
分子名称: GDP-mannose mannosyl hydrolase
著者Gabelli, S.B, Bianchet, M.A, Azurmendi, H.F, MIldvan, A.S, Amzel, L.M.
登録日2006-04-27
公開日2006-12-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray, NMR, and mutational studies of the catalytic cycle of the GDP-mannose mannosyl hydrolase reaction.
Biochemistry, 45, 2006
2KDW
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Solution structure of RppH mutant E53A from Escherichia coli
分子名称: RNA pyrophosphohydrolase
著者Li, H, Bi, Y, Jin, C.
登録日2009-01-19
公開日2010-01-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of RppH mutant E53A from Escherichia coli
To be Published

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