PDB: 2103 件ウェブページステータス検索Chemie searchBIRD

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2OTE	Crystal structure of a monomeric cyan fluorescent protein in the photobleached state 分子名称: ACETATE ION, GFP-like fluorescent chromoprotein cFP484 著者 Henderson, J.N, Ai, H, Campbell, R.E, Remington, S.J. 登録日 2007-02-07 公開日 2007-04-03 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Structural basis for reversible photobleaching of a green fluorescent protein homologue. Proc.Natl.Acad.Sci.Usa, 104, 2007
3DQ4	Structure of the Yellow Fluorescent Protein Citrine Frozen at 2000 Atmospheres Number 2: Structure 20 in a Series of 26 High Pressure Structures 分子名称: Green fluorescent protein 著者 Barstow, B, Kim, C.U. 登録日 2008-07-09 公開日 2008-09-23 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
6OFM	Crystal structure of green fluorescent protein (GFP); S65T, Y66(3-CH3Y); ih circular permutant (50-51) 分子名称: Green fluorescent protein (GFP); S65T, Y66(3-CH3Y); ih circular permutant (50-51) 著者 Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G. 登録日 2019-03-31 公開日 2019-07-10 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins. J.Am.Chem.Soc., 141, 2019
7A7P	rsGreen0.7-K206A partially in the green-off state 分子名称: 1,2-ETHANEDIOL, Green fluorescent protein, NITRATE ION 著者 De Zitter, E, Dedecker, P, Van Meervelt, L. 登録日 2020-08-30 公開日 2021-02-17 最終更新日 2021-05-05 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
6ZJE	Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor Ap5A 分子名称: BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CHLORIDE ION, GTP:AMP phosphotransferase AK3, ... 著者 Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E. 登録日 2020-06-28 公開日 2020-09-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Structural Basis for GTP versus ATP Selectivity in the NMP Kinase AK3. Biochemistry, 59, 2020
1Q4B	S65T Q80R Green Fluorescent Protein (GFP) pH 5.5 分子名称: Green Fluorescent Protein 著者 Jain, R.K, Ranganathan, R. 登録日 2003-08-02 公開日 2004-02-03 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Local complexity of amino acid interactions in a protein core. Proc.Natl.Acad.Sci.USA, 101, 2004
4IKE	Crystal Structure of a partly open ATP-lid of liganded Adenylate kinase 分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase 著者 Cho, Y.-J, Kern, D. 登録日 2012-12-26 公開日 2014-07-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 The ATP-Lid Opened Adenylate Kinase with Fully Occupied Substrates To be Published
1ZD8	Structure of human adenylate kinase 3 like 1 分子名称: GTP:AMP phosphotransferase mitochondrial 著者 Choe, J, Atanassova, A, Arrowsmith, C, Edwards, A, Sundstrom, M, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC) 登録日 2005-04-14 公開日 2005-05-17 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Structure of human adenylate kinase 3 like 1 to be published
5XJ5	Crystal structure of PlsY (YgiH), an integral membrane glycerol 3-phosphate acyltransferase - the monoacylglycerol form 分子名称: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, GLYCINE, Glycerol-3-phosphate acyltransferase, ... 著者 Li, Z, Li, D. 登録日 2017-04-30 公開日 2017-12-06 実験手法 X-RAY DIFFRACTION (1.481 Å) 主引用文献 Structural insights into the committed step of bacterial phospholipid biosynthesis. Nat Commun, 8, 2017
3CBE	Development of a family of redox-sensitive green fluorescent protein indicators for use in relatively oxidizing subcellular environments 分子名称: Green fluorescent protein, MAGNESIUM ION 著者 Lohman, J.R. 登録日 2008-02-21 公開日 2008-08-19 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (1.488 Å) 主引用文献 Development of a family of redox-sensitive green fluorescent protein indicators for use in relatively oxidizing subcellular environments Biochemistry, 47, 2008
8CRG	E. coli adenylate kinase in complex with two ADP molecules as a result of enzymatic AP4A hydrolysis 分子名称: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase 著者 Oelker, M, Tischlik, S, Wolf-Watz, M, Sauer-Eriksson, A.E. 登録日 2023-03-08 公開日 2023-06-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Insights into Enzymatic Catalysis from Binding and Hydrolysis of Diadenosine Tetraphosphate by E. coli Adenylate Kinase. Biochemistry, 62, 2023
3DQC	Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 3: Structure 13 in a Series of 26 High Pressure Structures 分子名称: Green fluorescent protein 著者 Barstow, B, Kim, C.U. 登録日 2008-07-09 公開日 2008-09-23 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3SVE	Engineered low-affinity halide-binding protein derived from YFP: bromide complex 分子名称: BROMIDE ION, Green fluorescent protein 著者 Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. 登録日 2011-07-12 公開日 2012-07-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.492 Å) 主引用文献 Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
3SS0	Engineered high-affinity halide-binding protein derived from YFP: fluoride complex 分子名称: Green fluorescent protein 著者 Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. 登録日 2011-07-07 公開日 2012-07-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.492 Å) 主引用文献 Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
4XGY	GFP based antibody (fluorobody) 分子名称: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, Green fluorescent protein, mAb LCDR3 著者 Shi, N, Chen, Y.G, Wang, S.H. 登録日 2015-01-03 公開日 2015-07-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.494 Å) 主引用文献 The structure of a GFP-based antibody (fluorobody) to TLH, a toxin from Vibrio parahaemolyticus. Acta Crystallogr.,Sect.F, 71, 2015
6UN4	Crystal structure of rsEGFP2, Y67(3-ClY), Y107(3-ClY) 分子名称: Green fluorescent protein, SULFATE ION 著者 Lin, C.-Y, Romei, M.G, Boxer, S.G, Chang, J. 登録日 2019-10-10 公開日 2020-07-15 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.499 Å) 主引用文献 Structural and spectroscopic characterization of photoactive yellow protein and photoswitchable fluorescent protein constructs containing heavy atoms. J Photochem Photobiol A Chem, 401, 2020
3KCS	Crystal structure of PAmCherry1 in the dark state 分子名称: PAmCherry1 protein 著者 Malashkevich, V.N, Subach, F.V, Zencheck, W.D, Xiao, H, Filonov, G.S, Almo, S.C, Verkhusha, V.V. 登録日 2009-10-21 公開日 2009-11-17 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states. Proc.Natl.Acad.Sci.USA, 106, 2009
3WC3	Crystal structure of endo-1,4-beta-glucanase from Eisenia fetida 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CITRATE ANION, ... 著者 Arimori, T, Tamada, T. 登録日 2013-05-24 公開日 2013-10-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of endo-1,4-beta-glucanase from Eisenia fetida J.SYNCHROTRON RADIAT., 20, 2013
2QRF	Green Fluorescent Protein: Cyclized-only Intermediate of Chromophore Maturation in the Q183E variant 分子名称: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION 著者 Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D. 登録日 2007-07-28 公開日 2009-04-21 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Green Fluorescent Protein Chromophore - Cyclized Intermediate To be Published
4MKH	Crystal structure of a stable adenylate kinase variant AKv18 分子名称: 1,2-ETHANEDIOL, Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ... 著者 Moon, S, Bae, E. 登録日 2013-09-05 公開日 2014-03-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 An integrated approach for thermal stabilization of a mesophilic adenylate kinase. Proteins, 82, 2014
1QYF	Crystal structure of matured green fluorescent protein R96A variant 分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, green-fluorescent protein 著者 Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2003-09-10 公開日 2003-09-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures. Proc.Natl.Acad.Sci.Usa, 100, 2003
2DUF	crystal structure of a green fluorescent protein variant S65T/H148D at pH 5.6 分子名称: Green fluorescent protein 著者 Shu, X, Remington, S.J. 登録日 2006-07-23 公開日 2007-07-10 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies. Biochemistry, 46, 2007
5DTZ	Crystal structure of rsFolder in the fluorescent on-state 分子名称: DI(HYDROXYETHYL)ETHER, Green fluorescent protein 著者 El Khatib, M, Colletier, J.P, Adam, V. 登録日 2015-09-18 公開日 2016-01-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Rational design of ultrastable and reversibly photoswitchable fluorescent proteins for super-resolution imaging of the bacterial periplasm. Sci Rep, 6, 2016
2RH7	Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla Reniformis 分子名称: Green fluorescent protein 著者 Loening, A.M, Fenn, T.D, Gambhir, S.S. 登録日 2007-10-06 公開日 2007-10-23 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla reniformis. J.Mol.Biol., 374, 2007
5DTY	Crystal structure of rsEGFP2 in the non-fluorescent off-state 分子名称: Green fluorescent protein 著者 Adam, V, Dos-Santos Martins, A. 登録日 2015-09-18 公開日 2016-01-20 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Rational design of ultrastable and reversibly photoswitchable fluorescent proteins for super-resolution imaging of the bacterial periplasm. Sci Rep, 6, 2016

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