PDB: 2705 件ウェブページステータス検索Chemie searchBIRD

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6ZTN	E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Webster, M.W, Takacs, M, Weixlbaumer, A. 登録日 2020-07-20 公開日 2020-09-16 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural basis of transcription-translation coupling and collision in bacteria. Science, 369, 2020
5LDX	Structure of mammalian respiratory Complex I, class3. 分子名称: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Vinothkumar, K.R, Zhu, J, Hirst, J. 登録日 2016-06-28 公開日 2016-09-14 最終更新日 2019-10-23 実験手法 ELECTRON MICROSCOPY (5.6 Å) 主引用文献 Structure of mammalian respiratory complex I. Nature, 536, 2016
8RXX	CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN 分子名称: 40S ribosomal protein S12, 40S ribosomal protein S14, 40S ribosomal protein S19-like protein, ... 著者 Rajan, K.S, Yonath, A. 登録日 2024-02-08 公開日 2024-05-15 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.97 Å) 主引用文献 Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification. Cell Rep, 43, 2024
6ZVK	The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism 分子名称: 18S RIBOSOMAL RNA, 28S RIBOSOMAL RNA, 40S RIBOSOMAL PROTEIN ES17, ... 著者 Abaeva, I.S, Vicens, Q, Bochler, A, Soufari, H, Simonetti, A, Pestova, T, Hashem, Y, Hellen, C.U.T. 登録日 2020-07-24 公開日 2020-12-23 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.49 Å) 主引用文献 The Halastavi arva Virus Intergenic Region IRES Promotes Translation by the Simplest Possible Initiation Mechanism. Cell Rep, 33, 2020
6ZU1	E. coli 70S-RNAP expressome complex in uncoupled state 2 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Webster, M.W, Takacs, M, Weixlbaumer, A. 登録日 2020-07-21 公開日 2020-09-16 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis of transcription-translation coupling and collision in bacteria. Science, 369, 2020
5LZU	Structure of the mammalian ribosomal termination complex with accommodated eRF1 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... 著者 Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S. 登録日 2016-10-02 公開日 2016-11-30 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.75 Å) 主引用文献 Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes. Cell, 167, 2016
8SCB	Terminating ribosome with SRI-41315 分子名称: (2S,4aS)-2-cyclobutyl-10-methyl-3-phenyl-2,10-dihydropyrimido[4,5-b]quinoline-4,5(3H,4aH)-dione, 18S_rRNA, 28S_rRNA, ... 著者 Yip, M.C.J, Coelho, J.P.L, Oltion, K, Tauton, J, Shao, S. 登録日 2023-04-05 公開日 2023-12-27 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 The eRF1 degrader SRI-41315 acts as a molecular glue at the ribosomal decoding center. Nat.Chem.Biol., 20, 2024
5J4D	E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon 分子名称: 16S ribosomal RNA, 25S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Svidritskiy, E, Korostelev, A.A. 登録日 2016-03-31 公開日 2016-05-18 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural Basis for Translation Termination on a Pseudouridylated Stop Codon. J.Mol.Biol., 428, 2016
5J8A	Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, ... 著者 Cocozaki, A, Ferguson, A. 登録日 2016-04-07 公開日 2016-07-06 最終更新日 2016-08-03 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Resistance mutations generate divergent antibiotic susceptibility profiles against translation inhibitors. Proc.Natl.Acad.Sci.USA, 113, 2016
5JCS	CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE 分子名称: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... 著者 Barrio-Garcia, C, Thoms, M, Flemming, D, Kater, L, Berninghausen, O, Bassler, J, Beckmann, R, Hurt, E. 登録日 2016-04-15 公開日 2016-11-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (9.5 Å) 主引用文献 Architecture of the Rix1-Rea1 checkpoint machinery during pre-60S-ribosome remodeling Nat.Struct.Mol.Biol., 23, 2016
6Z6N	Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1) 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Wells, J.N, Buschauer, R, Mackens-Kiani, T, Best, K, Kratzat, H, Berninghausen, O, Becker, T, Cheng, J, Beckmann, R. 登録日 2020-05-28 公開日 2020-07-29 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structure and function of yeast Lso2 and human CCDC124 bound to hibernating ribosomes. Plos Biol., 18, 2020
6Z6K	Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes 分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... 著者 Wells, J.N, Buschauer, R, Mackens-Kiani, T, Best, K, Kratzat, H, Berninghausen, O, Becker, T, Cheng, J, Beckmann, R. 登録日 2020-05-28 公開日 2020-07-29 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure and function of yeast Lso2 and human CCDC124 bound to hibernating ribosomes. Plos Biol., 18, 2020
5JC9	Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, ... 著者 Cocozaki, A, Ferguson, A. 登録日 2016-04-14 公開日 2016-07-06 最終更新日 2016-08-03 実験手法 X-RAY DIFFRACTION (3.03 Å) 主引用文献 Resistance mutations generate divergent antibiotic susceptibility profiles against translation inhibitors. Proc.Natl.Acad.Sci.USA, 113, 2016
6ZJY	Respiratory complex I from Thermus thermophilus, NAD+ dataset, minor state 分子名称: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, NADH-quinone oxidoreductase subunit 1, ... 著者 Kaszuba, K, Tambalo, M, Gallagher, G.T, Sazanov, L.A. 登録日 2020-06-29 公開日 2020-09-02 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (5.5 Å) 主引用文献 Key role of quinone in the mechanism of respiratory complex I. Nat Commun, 11, 2020
5J7L	Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, ... 著者 Cocozaki, A, Ferguson, A. 登録日 2016-04-06 公開日 2016-07-27 最終更新日 2018-08-15 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Resistance mutations generate divergent antibiotic susceptibility profiles against translation inhibitors. Proc.Natl.Acad.Sci.USA, 113, 2016
8RGQ	Open Complex I from murine liver 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ... 著者 Vercellino, I, Sazanov, L.A. 登録日 2023-12-14 公開日 2024-04-24 最終更新日 2024-07-31 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 SCAF1 drives the compositional diversity of mammalian respirasomes. Nat.Struct.Mol.Biol., 31, 2024
8RGP	Closed Complex I from murine brain 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ... 著者 Vercellino, I, Sazanov, L.A. 登録日 2023-12-14 公開日 2024-04-24 最終更新日 2024-07-31 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 SCAF1 drives the compositional diversity of mammalian respirasomes. Nat.Struct.Mol.Biol., 31, 2024
6ZR2	Cryo-EM structure of respiratory complex I in the active state from Mus musculus at 3.1 A 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-TRIPHOSPHATE, ... 著者 Bridges, H.R, Blaza, J.N, Agip, A.N.A, Hirst, J. 登録日 2020-07-10 公開日 2020-10-21 最終更新日 2020-10-28 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of inhibitor-bound mammalian complex I. Nat Commun, 11, 2020
6ZTL	E. coli 70S-RNAP expressome complex in collided state bound to NusG 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Webster, M.W, Takacs, M, Weixlbaumer, A. 登録日 2020-07-20 公開日 2020-09-16 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural basis of transcription-translation coupling and collision in bacteria. Science, 369, 2020
5LDW	Structure of mammalian respiratory Complex I, class1 分子名称: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Vinothkumar, K.R, Zhu, J, Hirst, J. 登録日 2016-06-28 公開日 2016-09-07 最終更新日 2019-10-23 実験手法 ELECTRON MICROSCOPY (4.27 Å) 主引用文献 Structure of mammalian respiratory complex I. Nature, 536, 2016
5LKS	Structure-function insights reveal the human ribosome as a cancer target for antibiotics 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ... 著者 Myasnikov, A.G, Natchiar, S.K, Nebout, M, Hazemann, I, Imbert, V, Khatter, H, Peyron, J.-F, Klaholz, B.P. 登録日 2016-07-23 公開日 2017-04-26 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure-function insights reveal the human ribosome as a cancer target for antibiotics. Nat Commun, 7, 2016
6ZTM	E. coli 70S-RNAP expressome complex in collided state without NusG 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Webster, M.W, Takacs, M, Weixlbaumer, A. 登録日 2020-07-20 公開日 2020-09-16 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis of transcription-translation coupling and collision in bacteria. Science, 369, 2020
5LI0	70S ribosome from Staphylococcus aureus 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Khusainov, I, Vicens, Q, Bochler, A, Grosse, F, Myasnikov, A, Menetret, J.F, Chicher, J, Marzi, S, Romby, P, Yusupova, G, Yusupov, M, Hashem, Y. 登録日 2016-07-13 公開日 2016-12-28 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure of the 70S ribosome from human pathogen Staphylococcus aureus. Nucleic Acids Res., 44, 2016
7A23	Plant mitochondrial respiratory complex I 分子名称: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 13kDa, 15kDa, ... 著者 Soufari, H, Waltz, F, Hashem, Y. 登録日 2020-08-15 公開日 2020-10-28 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Specific features and assembly of the plant mitochondrial complex I revealed by cryo-EM. Nat Commun, 11, 2020
5LC5	Structure of mammalian respiratory Complex I, class2 分子名称: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Vinothkumar, K.R, Zhu, J, Hirst, J. 登録日 2016-06-19 公開日 2016-09-07 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (4.35 Å) 主引用文献 Structure of mammalian respiratory complex I. Nature, 536, 2016

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