PDB: 55698 件ウェブページステータス検索Chemie searchBIRD

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5A8Q	Crystal structure beta-glucanase SdGluc5_26A from Saccharophagus degradans in complex with tetrasaccharide A obtained by soaking 分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ... 著者 Sulzenbacher, G, Lafond, M, Freyd, T, Henrissat, B, Coutinho, R.M, Berrin, J.G, Garron, M.L. 登録日 2015-07-16 公開日 2016-01-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans J.Biol.Chem., 291, 2016
3RUC	Specific recognition of N-acetylated substrates and domain flexibility in WbgU: a UDP-GalNAc 4-epimerase 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE, ... 著者 Bhatt, V.S, Guan, W, Wang, P.G. 登録日 2011-05-04 公開日 2011-05-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Specific recognition of N-acetylated substrates and domain flexibility in WbgU: a UDP-GalNAc 4-epimerase TO BE PUBLISHED
5A8P	Crystal structure beta-glucanase SdGluc5_26A from Saccharophagus degradans in complex with tetrasaccharide B 分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ... 著者 Sulzenbacher, G, Lafond, M, Freyd, T, Henrissat, B, Coutinho, R.M, Berrin, J.G, Garron, M.L. 登録日 2015-07-16 公開日 2016-01-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans J.Biol.Chem., 291, 2016
5AL3	Crystal structure of TNKS2 in complex with 2-(2,4-dichlorophenyl)-1- methyl-1H,2H,3H,4H-pyrido(2,3-d)pyrimidin-4-one 分子名称: (2R)-2-(2,4-dichlorophenyl)-1-methyl-2,3-dihydropyrido[2,3-d]pyrimidin-4-one, GLYCEROL, SULFATE ION, ... 著者 Nkizinkiko, Y, Lehtio, L. 登録日 2015-03-06 公開日 2015-07-29 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Discovery of Potent and Selective Nonplanar Tankyrase Inhibiting Nicotinamide Mimics. Bioorg.Med.Chem., 23, 2015
4F4S	Structure of the yeast F1Fo ATPase c10 ring with bound oligomycin 分子名称: ATP synthase subunit 9, mitochondrial, Oligomycin A 著者 Symersky, J, Mueller, D.M. 登録日 2012-05-11 公開日 2012-08-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Oligomycin frames a common drug-binding site in the ATP synthase. Proc.Natl.Acad.Sci.USA, 109, 2012
1GD1	STRUCTURE OF HOLO-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM BACILLUS STEAROTHERMOPHILUS AT 1.8 ANGSTROMS RESOLUTION 分子名称: HOLO-D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION 著者 Skarzynski, T, Moody, P.C.E, Wonacott, A.J. 登録日 1987-06-22 公開日 1988-01-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of holo-glyceraldehyde-3-phosphate dehydrogenase from Bacillus stearothermophilus at 1.8 A resolution. J.Mol.Biol., 193, 1987
5XTD	Cryo-EM structure of human respiratory complex I 分子名称: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, Acyl carrier protein, ... 著者 Gu, J, Wu, M, Yang, M. 登録日 2017-06-19 公開日 2017-08-30 最終更新日 2019-11-20 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Architecture of Human Mitochondrial Respiratory Megacomplex I2III2IV2. Cell, 170, 2017
7AQW	Cryo-EM structure of Arabidopsis thaliana Complex-I (membrane tip) 分子名称: (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, Acyl carrier protein 1, mitochondrial, ... 著者 Klusch, N, Kuehlbrandt, W, Yildiz, O. 登録日 2020-10-23 公開日 2021-12-08 実験手法 ELECTRON MICROSCOPY (3.17 Å) 主引用文献 A ferredoxin bridge connects the two arms of plant mitochondrial complex I. Plant Cell, 33, 2021
7AQR	Cryo-EM structure of Arabidopsis thaliana Complex-I (peripheral arm) 分子名称: Acyl carrier protein 2, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Klusch, N, Kuehlbrandt, W, Yildiz, O. 登録日 2020-10-22 公開日 2021-12-08 実験手法 ELECTRON MICROSCOPY (2.91 Å) 主引用文献 A ferredoxin bridge connects the two arms of plant mitochondrial complex I. Plant Cell, 33, 2021
1GQ2	Malic Enzyme from Pigeon Liver 分子名称: CHLORIDE ION, MALIC ENZYME, MANGANESE (II) ION, ... 著者 Yang, Z, Zhang, H, Liang, T. 登録日 2001-11-19 公開日 2002-05-23 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural Studies of the Pigeon Cytosolic Nadp+ -Dependent Malic Enzyme Protein Sci., 11, 2002
7AR8	Cryo-EM structure of Arabidopsis thaliana complex-I (closed conformation) 分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, ... 著者 Klusch, N, Kuelbrandt, W, Yildiz, O. 登録日 2020-10-23 公開日 2021-12-15 実験手法 ELECTRON MICROSCOPY (3.53 Å) 主引用文献 A ferredoxin bridge connects the two arms of plant mitochondrial complex I. Plant Cell, 33, 2021
7ARB	Cryo-EM structure of Arabidopsis thaliana Complex-I (complete composition) 分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, ... 著者 Klusch, N, Kuelbrandt, W, Yildiz, O. 登録日 2020-10-23 公開日 2021-12-15 実験手法 ELECTRON MICROSCOPY (3.41 Å) 主引用文献 A ferredoxin bridge connects the two arms of plant mitochondrial complex I. Plant Cell, 33, 2021
5MSS	Structure of the A-PCP didomain of carboxylic acid reductase (CAR) from Segniliparus rugosus in complex with AMP 分子名称: ADENOSINE MONOPHOSPHATE, SODIUM ION, Thioester reductase domain-containing protein 著者 Gahloth, D, Leys, D. 登録日 2017-01-05 公開日 2017-07-05 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Structures of carboxylic acid reductase reveal domain dynamics underlying catalysis. Nat. Chem. Biol., 13, 2017
1A4E	CATALASE A FROM SACCHAROMYCES CEREVISIAE 分子名称: AZIDE ION, CATALASE A, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Mate, M.J. 登録日 1998-01-29 公開日 1999-08-13 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of catalase-A from Saccharomyces cerevisiae. J.Mol.Biol., 286, 1999
6WP7	Avenolide Binding Autoregulator AvaR1 分子名称: AvaR1 著者 Kapoor, I, Olivares, P.J, Nair, S.K. 登録日 2020-04-26 公開日 2020-06-24 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Biochemical basis for the regulation of biosynthesis of antiparasitics by bacterial hormones. Elife, 9, 2020
1A7K	GLYCOSOMAL GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE IN A MONOCLINIC CRYSTAL FORM 分子名称: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHATE ION 著者 Kim, H, Hol, W.G.J. 登録日 1998-03-16 公開日 1998-06-17 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of Leishmania mexicana glycosomal glyceraldehyde-3-phosphate dehydrogenase in a new crystal form confirms the putative physiological active site structure. J.Mol.Biol., 278, 1998
6WP9	AvaR1 bound to Avenolide 分子名称: (5S)-5-[(6R)-6-hydroxy-6-methyl-5-oxooctyl]furan-2(5H)-one, AvaR1 著者 Kapoor, I, Olivares, P.J, Nair, S.K. 登録日 2020-04-26 公開日 2020-07-22 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Biochemical basis for the regulation of biosynthesis of antiparasitics by bacterial hormones. Elife, 9, 2020
1HDG	THE CRYSTAL STRUCTURE OF HOLO-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM THE HYPERTHERMOPHILIC BACTERIUM THERMOTOGA MARITIMA AT 2.5 ANGSTROMS RESOLUTION 分子名称: HOLO-D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION 著者 Korndoerfer, I, Steipe, B, Huber, R, Tomschy, A, Jaenicke, R. 登録日 1995-01-17 公開日 1995-03-31 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The crystal structure of holo-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima at 2.5 A resolution. J.Mol.Biol., 246, 1995
4YZT	Crystal structure of a tri-modular GH5 (subfamily 4) endo-beta-1, 4-glucanase from Bacillus licheniformis complexed with cellotetraose 分子名称: 1,2-ETHANEDIOL, Cellulose hydrolase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose 著者 Liberato, M.V, Popov, A, Polikarpov, I. 登録日 2015-03-25 公開日 2016-09-07 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.665 Å) 主引用文献 Molecular characterization of a family 5 glycoside hydrolase suggests an induced-fit enzymatic mechanism. Sci Rep, 6, 2016
5XTI	Cryo-EM architecture of human respiratory chain megacomplex-I2III2IV2 分子名称: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, Acyl carrier protein, ... 著者 Gu, J, Wu, M, Yang, M. 登録日 2017-06-19 公開日 2017-09-13 最終更新日 2019-11-20 実験手法 ELECTRON MICROSCOPY (17.4 Å) 主引用文献 Architecture of Human Mitochondrial Respiratory Megacomplex I2III2IV2. Cell, 170, 2017
5NHK	Structure of Ferric uptake regulator from francisella tularensis with Iron 分子名称: FE (III) ION, Ferric uptake regulation protein, ZINC ION 著者 Perard, J, Arnaud, L, Carpentier, P, Michaud-Soret, I, Cavazza, C. 登録日 2017-03-21 公開日 2018-05-16 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and functional studies of the metalloregulator Fur identify a promoter-binding mechanism and its role inFrancisella tularensisvirulence. Commun Biol, 1, 2018
3L2L	X-ray Crystallographic Analysis of Pig Pancreatic Alpha-Amylase with Limit Dextrin and Oligosaccharide 分子名称: CALCIUM ION, CHLORIDE ION, Pancreatic alpha-amylase, ... 著者 Larson, S.B, Day, J.S, McPherson, A. 登録日 2009-12-15 公開日 2010-04-14 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 X-ray crystallographic analyses of pig pancreatic alpha-amylase with limit dextrin, oligosaccharide, and alpha-cyclodextrin. Biochemistry, 49, 2010
5XTB	Cryo-EM structure of human respiratory complex I matrix arm 分子名称: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Gu, J, Wu, M, Yang, M. 登録日 2017-06-18 公開日 2017-08-30 最終更新日 2019-11-20 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Architecture of Human Mitochondrial Respiratory Megacomplex I2III2IV2. Cell, 170, 2017
3KX9	Engineering a closed form of the Archaeoglobus fulgidus ferritin by site directed mutagenesis 分子名称: Ferritin, GLYCEROL 著者 Johnson, E, Cascio, D, Sawaya, M.R. 登録日 2009-12-02 公開日 2010-12-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.101 Å) 主引用文献 The role of nonconserved residues of Archaeoglobus fulgidus ferritin on its unique structure and biophysical properties. J.Biol.Chem., 288, 2013
4WVP	Crystal structure of an activity-based probe HNE complex 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, BTN-3V3-NLB-OMT-OIC-3V2, ... 著者 Lechtenberg, B.C, Kasperkiewicz, P, Robinson, H.R, Drag, M, Riedl, S.J. 登録日 2014-11-06 公開日 2015-02-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 The Elastase-PK101 Structure: Mechanism of an Ultrasensitive Activity-based Probe Revealed. Acs Chem.Biol., 10, 2015

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