PDB: 35845 件ウェブページステータス検索Chemie searchBIRD

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5R91	PanDDA analysis group deposition Form1 MAP kinase p38-alpha -- Fragment KCL057 in complex with MAP kinase p38-alpha 分子名称: 2-[4-(2-aminophenyl)piperazin-1-yl]ethanol, ACETATE ION, CHLORIDE ION, ... 著者 De Nicola, G.F, Nichols, C.E. 登録日 2020-03-04 公開日 2020-07-22 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.731 Å) 主引用文献 Mining the PDB for Tractable Cases Where X-ray Crystallography Combined with Fragment Screens Can Be Used to Systematically Design Protein-Protein Inhibitors: Two Test Cases Illustrated by IL1 beta-IL1R and p38 alpha-TAB1 Complexes. J.Med.Chem., 63, 2020
2M17	ubiquitin-like domain-containing C-terminal domain phosphatase (UBLCP1) 分子名称: Ubiquitin-like domain-containing CTD phosphatase 1 著者 Lee, W, Yun, J. 登録日 2012-11-19 公開日 2013-06-05 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Solution Structure and Rpn1 Interaction of the UBL Domain of Human RNA Polymerase II C-Terminal Domain Phosphatase. Plos One, 8, 2013
4G29	Structure of the Catalytic Domain of the Salmonella Virulence Factor SseI 分子名称: Secreted effector protein sseI 著者 Stebbins, C.E, Bhaskaran, S.S. 登録日 2012-07-11 公開日 2012-11-28 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure of the catalytic domain of the Salmonella virulence factor SseI. Acta Crystallogr.,Sect.D, 68, 2012
4AL2	peptide deformylase (Ni-form) with hydrosulfide 分子名称: HYDROSULFURIC ACID, NICKEL (II) ION, PEPTIDE DEFORMYLASE 著者 Palm, G.J, Hinrichs, W. 登録日 2012-02-29 公開日 2012-04-04 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A Fret Enzyme-Based Probe for Monitoring Hydrogen Sulfide. Inorg.Chem., 51, 2012
6DXP	The crystal structure of an FMN-dependent NADH-azoreductase from Klebsiella pneumoniae 分子名称: FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase 著者 Arcinas, A.J, Ghosh, A, Chamala, S, Bonanno, J.B, Kelly, L, Almo, S.C. 登録日 2018-06-29 公開日 2018-07-25 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.478 Å) 主引用文献 The crystal structure of an FMN-dependent NADH-azoreductase from Klebsiella pneumoniae To Be Published
4CHE	Crystal structure of the putative cap-binding domain of the PB2 subunit of Thogoto virus polymerase 分子名称: POLYMERASE BASIC PROTEIN 2 著者 Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S. 登録日 2013-12-01 公開日 2014-02-05 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains. Plos One, 9, 2014
4DX7	Transport of drugs by the multidrug transporter AcrB involves an access and a deep binding pocket that are separated by a switch-loop 分子名称: Acriflavine resistance protein B, DARPIN, DECANE, ... 著者 Eicher, T, Cha, H, Seeger, M.A, Brandstaetter, L, El-Delik, J, Bohnert, J.A, Kern, W.V, Verrey, F, Gruetter, M.G, Diederichs, K, Pos, K.M. 登録日 2012-02-27 公開日 2012-05-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.253 Å) 主引用文献 Transport of drugs by the multidrug transporter AcrB involves an access and a deep binding pocket that are separated by a switch-loop. Proc.Natl.Acad.Sci.USA, 109, 2012
3G9W	Crystal Structure of Talin2 F2-F3 in Complex with the Integrin Beta1D Cytoplasmic Tail 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Integrin beta-1D, ... 著者 Anthis, N.J, Wegener, K.L, Ye, F, Kim, C, Lowe, E.D, Vakonakis, I, Bate, N, Critchley, D.R, Ginsberg, M.H, Campbell, I.D. 登録日 2009-02-15 公開日 2009-10-20 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.165 Å) 主引用文献 The structure of an integrin/talin complex reveals the basis of inside-out signal transduction Embo J., 28, 2009
7A24	Assembly intermediate of the plant mitochondrial complex I 分子名称: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 13kDa, 15kDa, ... 著者 Soufari, H, Waltz, F, Hashem, Y. 登録日 2020-08-16 公開日 2020-10-28 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Specific features and assembly of the plant mitochondrial complex I revealed by cryo-EM. Nat Commun, 11, 2020
2HPI	Eubacterial and Eukaryotic Replicative DNA Polymerases are not Homologous: X-ray Structure of DNA Polymerase III 分子名称: CHLORIDE ION, DNA polymerase III alpha subunit, MAGNESIUM ION, ... 著者 Bailey, S, Wing, R.A, Steitz, T.A. 登録日 2006-07-17 公開日 2006-09-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The Structure of T. aquaticus DNA Polymerase III Is Distinct from Eukaryotic Replicative DNA Polymerases. Cell(Cambridge,Mass.), 126, 2006
2HRK	Structural basis of yeast aminoacyl-tRNA synthetase complex formation revealed by crystal structures of two binary sub-complexes 分子名称: CHLORIDE ION, GU4 nucleic-binding protein 1, Glutamyl-tRNA synthetase, ... 著者 Simader, H, Suck, D. 登録日 2006-07-20 公開日 2006-09-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural basis of yeast aminoacyl-tRNA synthetase complex formation revealed by crystal structures of two binary sub-complexes. Nucleic Acids Res., 34, 2006
2NPB	NMR solution structure of mouse SelW 分子名称: Selenoprotein W 著者 Aachmann, F.L, Fomenko, D.E, Soragni, A, Gladyshev, V.N, Dikiy, A. 登録日 2006-10-27 公開日 2006-11-14 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution structure of selenoprotein W and NMR analysis of its interaction with 14-3-3 proteins J.Biol.Chem., 282, 2007
3AOA	Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket 分子名称: Acriflavine resistance protein B 著者 Nakashima, R, Sakurai, K, Yamaguchi, A. 登録日 2010-09-23 公開日 2011-11-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket Nature, 480, 2011
2J4W	Structure of a Plasmodium vivax apical membrane antigen 1-Fab F8.12.19 complex 分子名称: APICAL MEMBRANE ANTIGEN 1, FAB FRAGMENT OF MONOCLONAL ANTIBODY F8.12.19 著者 Igonet, S, Vulliez-Le Normand, B, Faure, G, Riottot, M.M, Kocken, C.H.M, Thomas, A.W, Bentley, G.A. 登録日 2006-09-07 公開日 2007-01-30 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Cross-Reactivity Studies of an Anti-Plasmodium Vivax Apical Membrane Antigen 1 Monoclonal Antibody: Binding and Structural Characterisation. J.Mol.Biol., 366, 2007
3AOB	Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket 分子名称: Acriflavine resistance protein B, RIFAMPICIN 著者 Nakashima, R, Sakurai, K, Yamaguchi, A. 登録日 2010-09-23 公開日 2011-11-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket Nature, 480, 2011
2YKH	Sensor region of a sensor histidine kinase 分子名称: PROBABLE SENSOR HISTIDINE KINASE PDTAS 著者 Preu, J, Panjikar, S, Morth, P, Jaiswal, R, Karunakar, P, Tucker, P.A. 登録日 2011-05-27 公開日 2012-06-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.78 Å) 主引用文献 The Sensor Region of the Ubiquitous Cytosolic Sensor Kinase, Pdtas, Contains Pas and Gaf Domain Sensing Modules. J.Struct.Biol., 177, 2012
2FN1	Crystal structures of Yersinia enterocolitica salicylate synthase (Irp9) in complex with the reaction products salicylate and pyruvate 分子名称: 2-HYDROXYBENZOIC ACID, MAGNESIUM ION, PYRUVIC ACID, ... 著者 Kerbarh, O, Chirgadze, D.Y, Blundell, T.L, Abell, C. 登録日 2006-01-10 公開日 2006-02-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structures of Yersinia enterocolitica Salicylate Synthase and its Complex with the Reaction Products Salicylate and Pyruvate. J.Mol.Biol., 357, 2006
6Y11	Respiratory complex I from Thermus thermophilus 分子名称: DUF3197 domain-containing protein, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... 著者 Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A. 登録日 2020-02-10 公開日 2020-09-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.109 Å) 主引用文献 Key role of quinone in the mechanism of respiratory complex I. Nat Commun, 11, 2020
4FBL	LipS and LipT, two metagenome-derived lipolytic enzymes increase the diversity of known lipase and esterase families 分子名称: CHLORIDE ION, LipS lipolytic enzyme, SPERMIDINE 著者 Chow, J, Krauss, U, Dall Antonia, Y, Fersini, F, Schmeisser, C, Schmidt, M, Menyes, I, Bornscheuer, U, Lauinger, B, Bongen, P, Pietruszka, J, Eckstein, M, Thum, O, Liese, A, Mueller-Dieckmann, J, Jaeger, K.-E, Kovacic, F, Streit, W.R, Structural Proteomics in Europe (SPINE) 登録日 2012-05-23 公開日 2012-10-10 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 The Metagenome-Derived Enzymes LipS and LipT Increase the Diversity of Known Lipases. Plos One, 7, 2012
2J5L	Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex 分子名称: APICAL MEMBRANE ANTIGEN 1, FAB FRAGMENT OF MONOCLONAL ANTIBODY F8.12.19 著者 Igonet, S, Vulliez-Le Normand, B, Faure, G, Riottot, M.M, Kocken, C.H.M, Thomas, A.W, Bentley, G.A. 登録日 2006-09-18 公開日 2007-01-30 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Cross-Reactivity Studies of an Anti-Plasmodium Vivax Apical Membrane Antigen 1 Monoclonal Antibody: Binding and Structural Characterisation. J.Mol.Biol., 366, 2007
4G2B	Structure of the Catalytic Domain of the Salmonella Virulence Factor SseI 分子名称: Secreted effector protein sseI 著者 Stebbins, C.E, Bhaskaran, S.S. 登録日 2012-07-11 公開日 2012-11-28 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structure of the catalytic domain of the Salmonella virulence factor SseI. Acta Crystallogr.,Sect.D, 68, 2012
4K7Q	Crystal Structure of AcrB Complexed with Linezolid at 3.5 Resolution 分子名称: Acriflavine resistance protein B, N-{[(5S)-3-(3-fluoro-4-morpholin-4-ylphenyl)-2-oxo-1,3-oxazolidin-5-yl]methyl}acetamide 著者 Hung, L.W, Kim, H.B, Murakami, S, Gupta, G, Kim, C.Y, Terwilliger, T.C. 登録日 2013-04-17 公開日 2013-07-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Crystal structure of AcrB complexed with linezolid at 3.5 Angstrom resolution. J.Struct.Funct.Genom., 14, 2013
6C94	Structure Of Cytochrome P450 4B1 (CYP4B1) Complexed with the Inhibitor HET0016 分子名称: Cytochrome P450 4B1, N-(4-butyl-2-methylphenyl)-N'-hydroxyimidoformamide, PROTOPORPHYRIN IX CONTAINING FE 著者 Hsu, M.-H, Johnson, E.F. 登録日 2018-01-25 公開日 2018-06-20 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.72 Å) 主引用文献 Noncovalent interactions dominate dynamic heme distortion in cytochrome P450 4B1. J. Biol. Chem., 293, 2018
4DS8	Complex structure of abscisic acid receptor PYL3-(+)-ABA-HAB1 in the presence of Mn2+ 分子名称: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Abscisic acid receptor PYL3, GLYCEROL, ... 著者 Zhang, X, Zhang, Q, Wang, G, Chen, Z. 登録日 2012-02-18 公開日 2012-06-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Complex Structures of the Abscisic Acid Receptor PYL3/RCAR13 Reveal a Unique Regulatory Mechanism Structure, 20, 2012
3HZU	Crystal structure of probable thiosulfate sulfurtransferase SSEA (rhodanese) from Mycobacterium tuberculosis 分子名称: GLYCEROL, SULFATE ION, Thiosulfate sulfurtransferase sseA 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2009-06-24 公開日 2009-07-07 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mycobacterium thermoresistibile as a source of thermostable orthologs of Mycobacterium tuberculosis proteins. Protein Sci., 21, 2012

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