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2YWM
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Crystal structure of glutaredoxin-like protein from Aquifex aeolicus
分子名称: Glutaredoxin-like protein
著者Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-20
公開日2007-10-23
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of glutaredoxin-like protein from Aquifex aeolicus
To be Published
2YYO
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Crystal structure of human SPRY domain
分子名称: SPRY domain-containing protein 3
著者Kishishita, S, Uchikubo-Kamo, T, Murayama, K, Terada, T, Chen, L, Fu, Z.Q, Chrzas, J, Shirouzu, M, Wang, B.C, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-30
公開日2008-05-06
最終更新日2020-09-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of human SPRY domain
To be Published
2YY0
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Crystal Structure of MS0802, c-Myc-1 binding protein domain from Homo sapiens
分子名称: C-Myc-binding protein
著者Xie, Y, Wang, H, Ihsanawati, K.T, Kishishita, S, Takemoto, C, Shirozu, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-27
公開日2008-04-29
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献crystal structure of c-Myc-1 binding protein domain from Homo sapiens
To be Published
2YXY
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Crystarl structure of Hypothetical conserved protein, GK0453
分子名称: Hypothetical conserved protein, GK0453
著者Nakamu, Y, Bessho, Y, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-27
公開日2007-10-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the hypothetical DUF1811-family protein GK0453 from Geobacillus kaustophilus HTA426
Acta Crystallogr.,Sect.F, 69, 2013
2YY5
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Crystal Structure of tryptophanyl-tRNA synthetase from Mycoplasma pneumoniae
分子名称: 5'-O-[(L-TRYPTOPHYLAMINO)SULFONYL]ADENOSINE, SULFATE ION, Tryptophanyl-tRNA synthetase
著者Ishii, T, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-27
公開日2008-04-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal Structure of tryptophanyl-tRNA synthetase from Mycoplasma pneumoniae
To be Published
2YZJ
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Crystal structure of dCTP deaminase from Sulfolobus tokodaii
分子名称: 167aa long hypothetical dUTPase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DEOXYURIDINE-5'-DIPHOSPHATE, ...
著者Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Crystal structure of dCTP deaminase from Sulfolobus tokodaii
To be Published
2YZT
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Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
分子名称: Putative uncharacterized protein TTHA1756
著者Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of uncharacterized protein TTHA1756 from Thermus thermophilus HB8: Structural variety in UPF0150 family proteins.
Proteins, 71, 2008
2YZY
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Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Putative uncharacterized protein TTHA1012
著者Ebihara, A, Watanabe, N, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
2Z09
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Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Universal stress protein family
著者Iino, H, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
2YYA
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Crystal structure of GAR synthetase from Aquifex aeolicus
分子名称: Phosphoribosylamine--glycine ligase
著者Baba, S, Kanagawa, M, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-27
公開日2007-10-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010
2Z0S
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Crystal structure of putative exosome complex RNA-binding protein
分子名称: Probable exosome complex RNA-binding protein 1
著者Murayama, K, Kato-Murayama, M, Takemoto, C, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2007-11-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of putative exosome complex RNA-binding protein
To be Published
2Z0Q
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Crystal structure of DH-PH domain of RhoGEF3(Xpln)
分子名称: Rho guanine nucleotide exchange factor 3, SULFATE ION
著者Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-07
公開日2008-05-13
最終更新日2012-12-12
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structure of the Rho-specific guanine nucleotide-exchange factor Xpln
Acta Crystallogr.,Sect.F, 68, 2012
2YEP
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STRUCTURE OF AN N-TERMINAL NUCLEOPHILE (NTN) HYDROLASE, OAT2, IN COMPLEX WITH GLUTAMATE
分子名称: ACETATE ION, GLUTAMATE N-ACETYLTRANSFERASE 2 ALPHA CHAIN, GLUTAMATE N-ACETYLTRANSFERASE 2 BETA CHAIN, ...
著者Chowdhury, R, Iqbal, A, Clifton, I.J, Schofield, C.J.
登録日2011-03-29
公開日2011-09-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and Biochemical Analyses Reveal How Ornithine Acetyl Transferase Binds Acidic and Basic Amino Acid Substrates.
Org.Biomol.Chem., 9, 2011
2YC0
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FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH R-2-HYDROXYGLUTARATE
分子名称: (2R)-2-hydroxypentanedioic acid, FE (II) ION, GLYCEROL, ...
著者Chowdhury, R, Clifton, I.J, Schofield, C.J.
登録日2011-03-10
公開日2011-03-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The oncometabolite 2-hydroxyglutarate inhibits histone lysine demethylases.
EMBO Rep., 12, 2011
7VS5
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BU of 7vs5 by Molmil
The expanded head structure of phage T4
分子名称: Capsid vertex protein, Major capsid protein, Small outer capsid protein
著者Fang, Q, Tang, W, Fokine, A, Mahalingam, M, Shao, Q, Rossmann, M.G, Rao, V.B.
登録日2021-10-25
公開日2022-10-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of a large prolate virus capsid in unexpanded and expanded states generate insights into the icosahedral virus assembly.
Proc.Natl.Acad.Sci.USA, 119, 2022
2Z6R
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Crystal structure of Lys49 to Arg mutant of Diphthine synthase
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Mizutani, H, Matsuura, Y, Krishna Swamy, B.S, Simanshu, D.K, Murthy, M.R.N, Kunishima, N.
登録日2007-08-08
公開日2007-08-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
2Z67
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Crystal structure of archaeal O-phosphoseryl-tRNA(Sec) selenium transferase (SepSecS)
分子名称: O-phosphoseryl-tRNA(Sec) selenium transferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
著者Araiso, Y, Ishitani, R, Pailouer, S, Oshikane, H, Domae, N, Soll, D, Nureki, O.
登録日2007-07-23
公開日2008-04-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into RNA-dependent eukaryal and archaeal selenocysteine formation.
Nucleic Acids Res., 36, 2008
2Z91
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Crystal structure of the Fab fragment of anti-ciguatoxin antibody 10C9
分子名称: Anti-ciguatoxin antibody 10C9 FAB heavy chain, Anti-ciguatoxin antibody 10C9 FAB light chain
著者Ui, M, Tanaka, Y, Tsumoto, K.
登録日2007-09-14
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献How Protein Recognizes Ladder-like Polycyclic Ethers: INTERACTIONS BETWEEN CIGUATOXIN (CTX3C) FRAGMENTS AND ITS SPECIFIC ANTIBODY 10C9
J.Biol.Chem., 283, 2008
2Z1P
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The Enterococcus faecalis MSCRAMM ACE binds its ligands by the collagen Hug Model
分子名称: Collagen adhesin protein
著者Ponnuraj, K.
登録日2007-05-11
公開日2007-05-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Enterococcus faecalis MSCRAMM ACE binds its ligand by the Collagen Hug model
J.Biol.Chem., 282, 2007
2ZCU
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Crystal structure of a new type of NADPH-dependent quinone oxidoreductase (QOR2) from escherichia coli
分子名称: COPPER (II) ION, Uncharacterized oxidoreductase ytfG
著者Kim, I.K, Yim, H.S, Kim, M.K, Kim, D.W, Kim, Y.M, Cha, S.S, Kang, S.O.
登録日2007-11-13
公開日2008-05-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a new type of NADPH-dependent quinone oxidoreductase (QOR2) from Escherichia coli
J.Mol.Biol., 379, 2008
2Z4P
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Crystal structure of FFRP-DM1
分子名称: 75aa long hypothetical regulatory protein AsnC, ISOLEUCINE
著者Yamada, M, Koike, H, Kudo, N, Suzuki, M.
登録日2007-06-21
公開日2007-09-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A Structural Code for Discriminating between Transcription Signals Revealed by the Feast/Famine Regulatory Protein DM1 in Complex with Ligands
Structure, 15, 2007
2ZFO
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Structure of the partially unliganded met state of 400 kDa hemoglobin: Insights into ligand-induced structural changes of giant hemoglobins
分子名称: Extracellular giant hemoglobin major globin subunit A1, Extracellular giant hemoglobin major globin subunit A2, Extracellular giant hemoglobin major globin subunit B1, ...
著者Numoto, N, Nakagawa, T, Kita, A, Sasayama, Y, Fukumori, Y, Miki, K.
登録日2008-01-08
公開日2008-04-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of the partially unliganded met state of 400 kDa hemoglobin: insights into ligand-induced structural changes of giant hemoglobins
Proteins, 73, 2008
2Z73
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Crystal structure of squid rhodopsin
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, DOCOSANE, PALMITIC ACID, ...
著者Murakami, M, Kouyama, T.
登録日2007-08-13
公開日2008-05-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of squid rhodopsin.
Nature, 453, 2008
2ZGY
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PARM with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Plasmid segregation protein parM
著者Popp, D, Narita, A, Oda, T, Fujisawa, T, Matsuo, H, Nitanai, Y, Iwasa, M, Maeda, K, Onishi, H, Maeda, Y.
登録日2008-01-30
公開日2008-02-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular structure of the ParM polymer and the mechanism leading to its nucleotide-driven dynamic instability
Embo J., 27, 2008
2Z8I
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Crystal Structure of Escherichia coli Gamma-Glutamyltranspeptidase in Complex with Azaserine
分子名称: Gamma-glutamyltranspeptidase, O-DIAZOACETYL-L-SERINE
著者Wada, K, Irie, M, Fukuyama, K.
登録日2007-09-05
公開日2008-06-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of Escherichia coli gamma-glutamyltranspeptidase in complex with azaserine and acivicin: novel mechanistic implication for inhibition by glutamine antagonists
J.Mol.Biol., 380, 2008

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