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5VLZ
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BU of 5vlz by Molmil
Backbone model for phage Qbeta capsid
分子名称: Capsid protein, Maturation protein A2
著者Cui, Z, Zhang, J.
登録日2017-04-26
公開日2017-10-18
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structures of Q beta virions, virus-like particles, and the Q beta-MurA complex reveal internal coat proteins and the mechanism of host lysis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2QUX
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BU of 2qux by Molmil
PP7 coat protein dimer in complex with RNA hairpin
分子名称: Coat protein, GLYCEROL, RNA (25-MER)
著者Chao, J.A.
登録日2007-08-06
公開日2007-12-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Structural basis for the coevolution of a viral RNA-protein complex.
Nat.Struct.Mol.Biol., 15, 2008
6E5K
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BU of 6e5k by Molmil
Heterogeneous-Backbone Mimics of a Designed Disulfide-Rich Protein: Aib turn, Aib helix, N-methyl hairpin
分子名称: Designed peptide NC_HEE_D1: Aib turn, Aib helix, N-methyl hairpin mutant
著者Cabalteja, C.C, Mihalko, D.S, Horne, W.S.
登録日2018-07-20
公開日2018-11-21
最終更新日2020-01-01
実験手法SOLUTION NMR
主引用文献Heterogeneous-Backbone Foldamer Mimics of a Computationally Designed, Disulfide-Rich Miniprotein.
Chembiochem, 20, 2019
6ZZR
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BU of 6zzr by Molmil
The Crystal Structure of human LDHA from Biortus.
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, L-lactate dehydrogenase A chain
著者Wang, F, Lin, D, Cheng, W, Bao, X, Zhu, B, Shang, H.
登録日2020-08-05
公開日2020-08-19
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The Crystal Structure of human LDHA from Biortus
To Be Published
1SL6
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BU of 1sl6 by Molmil
Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x.
分子名称: C-type lectin DC-SIGNR, CALCIUM ION, alpha-L-fucopyranose-(1-3)-[beta-D-galactopyranose-(1-4)]2-acetamido-2-deoxy-alpha-D-glucopyranose
著者Guo, Y, Feinberg, H, Conroy, E, Mitchell, D.A, Alvarez, R, Blixt, O, Taylor, M.E, Weis, W.I, Drickamer, K.
登録日2004-03-05
公開日2004-06-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis for distinct ligand-binding and targeting properties of the receptors DC-SIGN and DC-SIGNR
Nat.Struct.Mol.Biol., 11, 2004
2DGC
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BU of 2dgc by Molmil
GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DNA
分子名称: DNA (5'-D(*TP*GP*GP*AP*GP*AP*TP*GP*AP*CP*GP*TP*CP*AP*TP*CP*T P*CP*C)-3'), PROTEIN (GCN4)
著者Keller, W, Koenig, P, Richmond, T.J.
登録日1995-09-28
公開日1996-03-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a bZIP/DNA complex at 2.2 A: determinants of DNA specific recognition.
J.Mol.Biol., 254, 1995
6ZVR
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BU of 6zvr by Molmil
C11 symmetry: Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
分子名称: Vipp1
著者Liu, J.W, Tassinari, M, Souza, D.P, Naskar, S, Noel, J.K, Bohuszewicz, O, Buck, M, Williams, T.A, Baum, B, Low, H.H.
登録日2020-07-27
公開日2021-08-04
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (8.2 Å)
主引用文献Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
Cell, 184, 2021
6ZW4
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C14 symmetry: Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
分子名称: vipp1
著者Liu, J.W, Tassinari, M, Souza, D.P, Naskar, S, Noel, J.K, Bohuszewicz, O, Buck, M, Williams, T.A, Baum, B, Low, H.H.
登録日2020-07-27
公開日2021-08-04
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
Cell, 184, 2021
6ZW5
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BU of 6zw5 by Molmil
C15 symmetry: Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
分子名称: vipp1
著者Liu, J.W, Tassinari, M, Souza, D.P, Naskar, S, Noel, J.K, Bohuszewicz, O, Buck, M, Williams, T.A, Baum, B, Low, H.H.
登録日2020-07-27
公開日2021-08-04
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
Cell, 184, 2021
6ZVS
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BU of 6zvs by Molmil
C12 symmetry: Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
分子名称: Vipp1
著者Liu, J, Tassinari, M, Souza, D.P, Naskar, S, Noel, J.K, Bohuszewicz, O, Buck, M, Williams, T.A, Baum, B, Low, H.H.
登録日2020-07-27
公開日2021-08-04
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
Cell, 184, 2021
6ZVT
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BU of 6zvt by Molmil
C13 symmetry: Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
分子名称: Vipp1
著者Liu, J.W, Tassinari, M, Souza, D.P, Naskar, S, Noel, J.K, Bohuszewicz, O, Buck, M, Williams, T.A, Baum, B, Low, H.H.
登録日2020-07-27
公開日2021-08-04
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
Cell, 184, 2021
6ZW6
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BU of 6zw6 by Molmil
C16 symmetry: Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
分子名称: vipp1
著者Liu, J, Tassinari, M, Souza, D.P, Naskar, S, Noel, J.K, Bohuszewicz, O, Buck, M, Williams, T.A, Baum, B, Low, H.H.
登録日2020-07-27
公開日2021-08-04
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (7.4 Å)
主引用文献Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
Cell, 184, 2021
1J09
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BU of 1j09 by Molmil
Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with ATP and Glu
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GLUTAMIC ACID, Glutamyl-tRNA synthetase, ...
著者Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-11-12
公開日2003-02-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding
EMBO J., 22, 2003
6ZW7
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BU of 6zw7 by Molmil
C17 symmetry: Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
分子名称: vipp1
著者Liu, J, Tassinari, M, Souza, D.P, Naskar, S, Noel, J.K, Bohuszewicz, O, Buck, M, Williams, T.A, Baum, B, Low, H.H.
登録日2020-07-27
公開日2021-08-04
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (9.4 Å)
主引用文献Bacterial Vipp1 and PspA are members of the ancient ESCRT-III membrane-remodeling superfamily.
Cell, 184, 2021
1TNZ
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BU of 1tnz by Molmil
Rat Protein Geranylgeranyltransferase Type-I Complexed with a GGPP analog and a RRCVLL Peptide Derived from Cdc42 splice isoform-2
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE, CHLORIDE ION, ...
著者Reid, T.S, Terry, K.L, Casey, P.J, Beese, L.S.
登録日2004-06-11
公開日2004-11-02
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystallographic analysis of CaaX prenyltransferases complexed with substrates defines rules of protein substrate selectivity.
J.Mol.Biol., 343, 2004
2DER
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BU of 2der by Molmil
Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the initial tRNA binding state
分子名称: PHOSPHATE ION, SULFATE ION, tRNA, ...
著者Numata, T, Ikeuchi, Y, Fukai, S, Suzuki, T, Nureki, O.
登録日2006-02-17
公開日2006-08-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Snapshots of tRNA sulphuration via an adenylated intermediate
Nature, 442, 2006
6E8G
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BU of 6e8g by Molmil
CryoEM reconstruction of IST1-CHMP1B copolymer filament bound to ssDNA at 2.9 Angstrom resolution
分子名称: Charged multivesicular body protein 1b, IST1 homolog
著者Talledge, N, Frost, A, McCullough, J.
登録日2018-07-29
公開日2018-08-15
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The ESCRT-III proteins IST1 and CHMP1B assemble around nucleic acids
Biorxiv, 2018
1S1L
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BU of 1s1l by Molmil
Influence of Groove Interactions on the Formation of DNA Holliday Junctions
分子名称: 5'-D(*CP*CP*(OIP)*GP*TP*AP*CP*(5CM)P*GP*G)-3'
著者Hays, F.A, Jones, Z.J, Ho, P.S.
登録日2004-01-06
公開日2004-08-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Influence of minor groove substituents on the structure of DNA holliday junctions.
Biochemistry, 43, 2004
1IHF
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BU of 1ihf by Molmil
INTEGRATION HOST FACTOR/DNA COMPLEX
分子名称: CADMIUM ION, DNA (35-MER), DNA (5'-D(*GP*CP*TP*TP*AP*TP*CP*AP*AP*TP*TP*TP*GP*TP*TP*GP*C P*AP*CP*C)-3'), ...
著者Rice, P.A, Yang, S.-W, Mizuuchi, K, Nash, H.A.
登録日1996-08-21
公開日1997-02-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn.
Cell(Cambridge,Mass.), 87, 1996
2DET
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BU of 2det by Molmil
Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the pre-reaction state
分子名称: SULFATE ION, tRNA, tRNA-specific 2-thiouridylase mnmA
著者Numata, T, Ikeuchi, Y, Fukai, S, Suzuki, T, Nureki, O.
登録日2006-02-17
公開日2006-08-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Snapshots of tRNA sulphuration via an adenylated intermediate
Nature, 442, 2006
1SGH
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BU of 1sgh by Molmil
Moesin FERM domain bound to EBP50 C-terminal peptide
分子名称: Ezrin-radixin-moesin binding phosphoprotein 50, Moesin
著者Finnerty, C.M, Chambers, D, Ingraffea, J, Faber, H.R, Karplus, P.A, Bretscher, A.
登録日2004-02-23
公開日2004-06-29
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The EBP50-moesin interaction involves a binding site regulated by direct masking on the FERM domain
J.Cell.Sci., 117, 2004
2BUA
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BU of 2bua by Molmil
Crystal Structure Of Porcine Dipeptidyl Peptidase IV (Cd26) in Complex With a Low Molecular Weight Inhibitor.
分子名称: 1-METHYLAMINE-1-BENZYL-CYCLOPENTANE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nordhoff, S, Cerezo-Galvez, S, Feurer, A, Hill, O, Matassa, V.G, Metz, G, Rummey, C, Thiemann, M, Edwards, P.J.
登録日2005-06-09
公開日2006-01-23
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献The reversed binding of beta-phenethylamine inhibitors of DPP-IV: X-ray structures and properties of novel fragment and elaborated inhibitors.
Bioorg. Med. Chem. Lett., 16, 2006
1IJW
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BU of 1ijw by Molmil
Testing the Water-Mediated Hin Recombinase DNA Recognition by Systematic Mutations.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*AP*TP*(CBR)P*TP*TP*AP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3', ...
著者Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
登録日2001-04-30
公開日2002-02-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
6E5H
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BU of 6e5h by Molmil
Heterogeneous-Backbone Mimics of a Designed Disulfide-Rich Protein: Aib turn
分子名称: Designed peptide NC_HEE_D1: Aib turn mutant
著者Cabalteja, C.C, Mihalko, D.S, Horne, W.S.
登録日2018-07-20
公開日2018-11-21
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Heterogeneous-Backbone Foldamer Mimics of a Computationally Designed, Disulfide-Rich Miniprotein.
Chembiochem, 20, 2019
1RCX
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BU of 1rcx by Molmil
NON-ACTIVATED SPINACH RUBISCO IN COMPLEX WITH ITS SUBSTRATE RIBULOSE-1,5-BISPHOSPHATE
分子名称: RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE, RIBULOSE-1,5-DIPHOSPHATE
著者Taylor, T.C, Andersson, I.
登録日1996-12-06
公開日1997-06-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structure of the complex between rubisco and its natural substrate ribulose 1,5-bisphosphate.
J.Mol.Biol., 265, 1997

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