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4V2V
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JMJD2A COMPLEXED WITH NI(II), NOG AND HISTONE H3K27me3 PEPTIDE (25-29) ARK(me3)SA
分子名称: CHLORIDE ION, HISTONE H3.1T, LYSINE-SPECIFIC DEMETHYLASE 4A, ...
著者Chowdhury, R, Madden, S.K, Schofield, C.J.
登録日2014-10-15
公開日2014-11-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Studies on the Catalytic Domains of Multiple Jmjc Oxygenases Using Peptide Substrates.
Epigenetics, 9, 2014
6RUJ
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BU of 6ruj by Molmil
Factor inhibiting HIF-1 alpha in complex with consensus ankyrin repeat domain-(d)3-hydroxy-Leu peptide
分子名称: CONSENSUS ANKYRIN REPEAT DOMAIN-(D)3-hydroxy-Leu, Hypoxia-inducible factor 1-alpha inhibitor, N-OXALYLGLYCINE, ...
著者Nakashima, Y, McDonough, M.A, Schofield, C.J.
登録日2019-05-28
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献A human protein hydroxylase that accepts D-residues
Commun Chem, 2020
6TTM
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BU of 6ttm by Molmil
Hyoscyamine 6-hydroxylase in complex with N-oxalylglycine and hyoscyamine
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Hyoscyamine 6 beta-hydroxylase, ...
著者Kluza, A, Kurpiewska, K, Mrugala, B, Porebski, P.J, Niedzialkowska, E, Minor, W, Borowski, T.
登録日2019-12-29
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Regioselectivity of hyoscyamine 6 beta-hydroxylase-catalysed hydroxylation as revealed by high-resolution structural information and QM/MM calculations.
Dalton Trans, 49, 2020
6TTN
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BU of 6ttn by Molmil
N-terminally truncated hyoscyamine 6-hydroxylase (tH6H) in complex with N-oxalylglycine and hyoscyamine
分子名称: 1,2-ETHANEDIOL, Hyoscyamine 6 beta-hydroxylase, N-OXALYLGLYCINE, ...
著者Kluza, A, Mrugala, B, Porebski, P.J, Kurpiewska, K, Niedzialkowska, E, Weiss, M.S, Borowski, T.
登録日2019-12-29
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Regioselectivity of hyoscyamine 6 beta-hydroxylase-catalysed hydroxylation as revealed by high-resolution structural information and QM/MM calculations.
Dalton Trans, 49, 2020
4QKN
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BU of 4qkn by Molmil
Crystal structure of FTO bound to a selective inhibitor
分子名称: 2-[(2,6-dichloro-3-methyl-phenyl)amino]benzoic acid, Alpha-ketoglutarate-dependent dioxygenase FTO, GLYCEROL, ...
著者Yang, C.-G, Huang, Y, Gan, J.
登録日2014-06-07
公開日2014-12-03
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Meclofenamic acid selectively inhibits FTO demethylation of m6A over ALKBH5.
Nucleic Acids Res., 43, 2015
4NM6
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BU of 4nm6 by Molmil
Crystal structure of TET2-DNA complex
分子名称: 5'-D(*AP*CP*CP*AP*CP*(5CM)P*GP*GP*TP*GP*GP*T)-3', FE (II) ION, Methylcytosine dioxygenase TET2, ...
著者Hu, L, Li, Z, Cheng, J, Rao, Q, Gong, W, Liu, M, Wang, P, Xu, Y.
登録日2013-11-14
公開日2013-12-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.026 Å)
主引用文献Crystal Structure of TET2-DNA Complex: Insight into TET-Mediated 5mC Oxidation.
Cell(Cambridge,Mass.), 155, 2013
4NR1
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BU of 4nr1 by Molmil
Factor inhibiting HIF-1 alpha in complex with consensus ankyrin repeat domain-(d)allyl-GLY peptide
分子名称: CONSENSUS ANKYRIN REPEAT DOMAIN-(D)allyl glycine, Hypoxia-inducible factor 1-alpha inhibitor, N-OXALYLGLYCINE, ...
著者Scotti, J.S, McDonough, M.A, Schofield, C.J.
登録日2013-11-26
公開日2015-01-21
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structure of an oxygenase in complex with substrate
To be Published
5JQY
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BU of 5jqy by Molmil
Aspartyl/Asparaginyl beta-hydroxylase (AspH)oxygenase and TPR domains in complex with manganese, N-oxalylglycine and factor X substrate peptide fragment(39mer-4Ser)
分子名称: ACETATE ION, Aspartyl/asparaginyl beta-hydroxylase, Coagulation factor X, ...
著者McDonough, M.A, Pfeffer, I.
登録日2016-05-05
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Aspartate/asparagine-beta-hydroxylase crystal structures reveal an unexpected epidermal growth factor-like domain substrate disulfide pattern.
Nat Commun, 10, 2019
5JZA
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BU of 5jza by Molmil
Aspartyl/Asparaginyl beta-hydroxylase (AspH)oxygenase and TPR domains in complex with manganese and N-oxalylglycine
分子名称: Aspartyl/asparaginyl beta-hydroxylase, GLYCEROL, MANGANESE (II) ION, ...
著者McDonough, M.A, Pfeffer, I.
登録日2016-05-16
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Aspartate/asparagine-beta-hydroxylase crystal structures reveal an unexpected epidermal growth factor-like domain substrate disulfide pattern.
Nat Commun, 10, 2019
5JZU
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BU of 5jzu by Molmil
Aspartyl/Asparaginyl beta-hydroxylase (AspH)oxygenase and TPR domains in complex with manganese, N-oxalylglycine and factor X substrate peptide fragment (26mer)
分子名称: Aspartyl/asparaginyl beta-hydroxylase, Coagulation factor X, MANGANESE (II) ION, ...
著者McDonough, M.A, Pfeffer, I.
登録日2016-05-17
公開日2017-06-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Aspartate/asparagine-beta-hydroxylase crystal structures reveal an unexpected epidermal growth factor-like domain substrate disulfide pattern.
Nat Commun, 10, 2019
5JZ8
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BU of 5jz8 by Molmil
Aspartyl/Asparaginyl beta-hydroxylase (AspH)oxygenase and TPR domains in complex with manganese, N-oxalylglycine, and factor X substrate peptide fragment (39mer)
分子名称: ACETATE ION, Aspartyl/asparaginyl beta-hydroxylase, Coagulation factor X, ...
著者McDonough, M.A, Pfeffer, I.
登録日2016-05-16
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.095 Å)
主引用文献Aspartate/asparagine-beta-hydroxylase crystal structures reveal an unexpected epidermal growth factor-like domain substrate disulfide pattern.
Nat Commun, 10, 2019
6F4T
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BU of 6f4t by Molmil
Human JMJD5 (W414C) in complex with Mn(II), NOG and RCCD1 (139-143) (complex-5)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, JmjC domain-containing protein 5, ...
著者Chowdhury, R, Islam, M.S, Schofield, C.J.
登録日2017-11-30
公開日2018-04-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献JMJD5 is a human arginyl C-3 hydroxylase.
Nat Commun, 9, 2018
6F0W
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BU of 6f0w by Molmil
prolyl hydroxylase in complex with hypoxia inducible factor oxygen degradation domain peptide fragment from Trichoplax adhaerens
分子名称: HIF prolyl hydroxylase, Hypoxia inducible factor, alpha subunit, ...
著者McDonough, M.A, Boleininger, A, Schofield, C.J.
登録日2017-11-20
公開日2018-10-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.301 Å)
主引用文献Born to sense: biophysical analyses of the oxygen sensing prolyl hydroxylase from the simplest animal Trichoplax adhaerens.
Hypoxia (Auckl), 6, 2018
6F4R
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BU of 6f4r by Molmil
Human JMJD5 (N308C) in complex with Mn(II), NOG and RCCD1 (139-143) (complex-3)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, JmjC domain-containing protein 5, MANGANESE (II) ION, ...
著者Chowdhury, R, Islam, M.S, Schofield, C.J.
登録日2017-11-30
公開日2018-04-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献JMJD5 is a human arginyl C-3 hydroxylase.
Nat Commun, 9, 2018
6F4P
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BU of 6f4p by Molmil
Human JMJD5 in complex with MN, NOG and RPS6 (129-144) (complex-1)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 40S ribosomal protein S6, JmjC domain-containing protein 5, ...
著者Chowdhury, R, Islam, M.S, Schofield, C.J.
登録日2017-11-29
公開日2018-04-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献JMJD5 is a human arginyl C-3 hydroxylase.
Nat Commun, 9, 2018
6F4Q
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BU of 6f4q by Molmil
Human JMJD5 (Q275C) in complex with Mn(II), NOG and RPS6-A138C (129-144) (complex-2)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 40S ribosomal protein S6, GLYCEROL, ...
著者Chowdhury, R, Islam, M.S, Schofield, C.J.
登録日2017-11-29
公開日2018-04-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献JMJD5 is a human arginyl C-3 hydroxylase.
Nat Commun, 9, 2018
6GPN
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BU of 6gpn by Molmil
Crystal Structure of the CsiD Glutarate Hydroxylase in complex with N-Oxalylglycine
分子名称: FE (II) ION, Glutarate 2-hydroxylase, N-OXALYLGLYCINE
著者Williams, R.M, Mayans, O, Hartig, J.S.
登録日2018-06-06
公開日2019-01-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Widespread bacterial lysine degradation proceeding via glutarate and L-2-hydroxyglutarate.
Nat Commun, 9, 2018
6Q9F
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BU of 6q9f by Molmil
Aspartyl/Asparaginyl beta-hydroxylase (AspH) H679A in complex with Mn, NOG and Factor X peptide fragment (39mer-4Ser)
分子名称: Aspartyl/asparaginyl beta-hydroxylase, Coagulation factor X, GLYCEROL, ...
著者Chowdhury, R, Pfeffer, I, Schofield, C.J.
登録日2018-12-18
公開日2020-01-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Aspartyl/Asparaginyl beta-hydroxylase (AspH) H679A in complex with Mn, NOG and Factor X peptide fragment (39mer-4Ser)
To Be Published
2OZN
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BU of 2ozn by Molmil
The Cohesin-Dockerin Complex of NagJ and NagH from Clostridium perfringens
分子名称: CALCIUM ION, CHLORIDE ION, Hyalurononglucosaminidase, ...
著者Adams, J.J, Boraston, A, Smith, S.P.
登録日2007-02-26
公開日2008-05-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis of Clostridium perfringens toxin complex formation.
Proc.Natl.Acad.Sci.Usa, 105, 2008
5FV3
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BU of 5fv3 by Molmil
Crystal structure of human JARID1B construct c2 in complex with N- Oxalylglycine.
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Nowak, R, Srikannathasan, V, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, Talon, R, von Delft, F, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Oppermann, U.
登録日2016-02-02
公開日2016-02-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Structural Analysis of Human Kdm5B Guides Histone Demethylase Inhibitor Development.
Nat.Chem.Biol., 12, 2016
7CKK
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BU of 7ckk by Molmil
Structural complex of FTO bound with Dac51
分子名称: 2-{[2,6-dichloro-4-(3,5-dimethyl-1H-pyrazol-4-yl)phenyl]amino}-N-hydroxybenzamide, Alpha-ketoglutarate-dependent dioxygenase FTO, N-OXALYLGLYCINE
著者Yang, C, Gan, J.
登録日2020-07-17
公開日2021-07-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Tumors exploit FTO-mediated regulation of glycolytic metabolism to evade immune surveillance.
Cell Metab., 33, 2021
3AVS
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BU of 3avs by Molmil
Catalytic fragment of UTX/KDM6A bound with N-oxyalylglycine, and Ni(II)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysine-specific demethylase 6A, ...
著者Sengoku, T, Yokoyama, S.
登録日2011-03-07
公開日2011-10-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for histone H3 Lys 27 demethylation by UTX/KDM6A
Genes Dev., 25, 2011
3AVR
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BU of 3avr by Molmil
Catalytic fragment of UTX/KDM6A bound with histone H3K27me3 peptide, N-oxyalylglycine, and Ni(II)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Histone H3, ...
著者Sengoku, T, Yokoyama, S.
登録日2011-03-07
公開日2011-10-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Structural basis for histone H3 Lys 27 demethylation by UTX/KDM6A
Genes Dev., 25, 2011
6HL6
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BU of 6hl6 by Molmil
Factor Inhibiting HIF (FIH) in complex with zinc, NOG and iASPP(670-693)
分子名称: GLYCEROL, Hypoxia-inducible factor 1-alpha inhibitor, N-OXALYLGLYCINE, ...
著者Leissing, T.M, Chowdhury, R, Clifton, I.J, Lu, X, Schofield, C.J.
登録日2018-09-10
公開日2019-10-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Factor Inhibiting HIF (FIH) in complex with zinc, NOG and iASPP(670-693)
To Be Published
6IP4
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BU of 6ip4 by Molmil
Crystal structure of Arabidopsis thaliana JMJ13 catalytic domain in complex with NOG and an H3K27me3 peptide
分子名称: Arabidopsis JMJ13, Histone H3.2, N-OXALYLGLYCINE, ...
著者Hu, H, Du, J.
登録日2018-11-02
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Arabidopsis H3K27me3 demethylase JUMONJI 13 is a temperature and photoperiod dependent flowering repressor.
Nat Commun, 10, 2019

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