Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3WD3
DownloadVisualize
BU of 3wd3 by Molmil
Serratia marcescens Chitinase B complexed with azide inhibitor
分子名称: Chitinase B, GLYCEROL, SULFATE ION, ...
著者Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T.
登録日2013-06-06
公開日2013-09-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
3WD0
DownloadVisualize
BU of 3wd0 by Molmil
Serratia marcescens Chitinase B, tetragonal form
分子名称: Chitinase B, DITHIANE DIOL, GLYCEROL, ...
著者Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T.
登録日2013-06-06
公開日2013-09-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
3WD4
DownloadVisualize
BU of 3wd4 by Molmil
Serratia marcescens Chitinase B complexed with azide inhibitor and quinoline compound
分子名称: (E)-N-(prop-2-en-1-yloxy)-1-(quinolin-4-yl)methanimine, Chitinase B, GLYCEROL, ...
著者Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T.
登録日2013-06-06
公開日2013-09-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
3WD2
DownloadVisualize
BU of 3wd2 by Molmil
Serratia marcescens Chitinase B complexed with azide inhibitor
分子名称: Chitinase B, DITHIANE DIOL, GLYCEROL, ...
著者Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T.
登録日2013-06-06
公開日2013-09-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor
Proc.Natl.Acad.Sci.USA, 110, 2013
3WDE
DownloadVisualize
BU of 3wde by Molmil
Mutant N-terminal domain of Mycobacterium tuberculosis ClpC1, F80Y, bound to Cyclomarin A
分子名称: ACETATE ION, Cyclomarin A, Probable ATP-dependent Clp protease ATP-binding subunit
著者Vasudevan, D, Noble, C.G.
登録日2013-06-14
公開日2013-09-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Structural basis of mycobacterial inhibition by cyclomarin A
J.Biol.Chem., 288, 2013
3WDB
DownloadVisualize
BU of 3wdb by Molmil
N-terminal domain of Mycobacterium tuberculosis ClpC1
分子名称: FORMIC ACID, Probable ATP-dependent Clp protease ATP-binding subunit
著者Vasudevan, D, Noble, C.G.
登録日2013-06-14
公開日2013-09-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Structural basis of mycobacterial inhibition by cyclomarin A
J.Biol.Chem., 288, 2013
3WDD
DownloadVisualize
BU of 3wdd by Molmil
Mutant N-terminal domain of Mycobacterium tuberculosis ClpC1, F2Y, bound to Cyclomarin A
分子名称: ACETATE ION, Cyclomarin A, Probable ATP-dependent Clp protease ATP-binding subunit
著者Vasudevan, D, Noble, C.G.
登録日2013-06-14
公開日2013-09-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Structural basis of mycobacterial inhibition by cyclomarin A
J.Biol.Chem., 288, 2013
3WDC
DownloadVisualize
BU of 3wdc by Molmil
N-terminal domain of Mycobacterium tuberculosis ClpC1 bound to Cyclomarin A
分子名称: ACETATE ION, Cyclomarin A, Probable ATP-dependent Clp protease ATP-binding subunit
著者Vasudevan, D, Noble, C.G.
登録日2013-06-14
公開日2013-09-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Structural basis of mycobacterial inhibition by cyclomarin A
J.Biol.Chem., 288, 2013
4LCQ
DownloadVisualize
BU of 4lcq by Molmil
The crystal structure of di-Zn dihydropyrimidinase in complex with NCBI
分子名称: (2S)-3-(carbamoylamino)-2-methylpropanoic acid, ZINC ION, dihydropyrimidinase
著者Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
登録日2013-06-22
公開日2013-09-18
最終更新日2014-02-12
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Crystal structures of vertebrate dihydropyrimidinase and complexes from Tetraodon nigroviridis with lysine carbamylation: metal and structural requirements for post-translational modification and function.
J.Biol.Chem., 288, 2013
4LCR
DownloadVisualize
BU of 4lcr by Molmil
The crystal structure of di-Zn dihydropyrimidinase in complex with NCBA
分子名称: Chromosome 8 SCAF14545, whole genome shotgun sequence, N-(AMINOCARBONYL)-BETA-ALANINE, ...
著者Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
登録日2013-06-22
公開日2013-09-18
最終更新日2014-02-12
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of vertebrate dihydropyrimidinase and complexes from Tetraodon nigroviridis with lysine carbamylation: metal and structural requirements for post-translational modification and function.
J.Biol.Chem., 288, 2013
4LCS
DownloadVisualize
BU of 4lcs by Molmil
The crystal structure of di-Zn dihydropyrimidinase in complex with hydantoin
分子名称: Chromosome 8 SCAF14545, whole genome shotgun sequence, ZINC ION, ...
著者Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S.
登録日2013-06-23
公開日2013-09-18
最終更新日2014-02-12
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of vertebrate dihydropyrimidinase and complexes from Tetraodon nigroviridis with lysine carbamylation: metal and structural requirements for post-translational modification and function.
J.Biol.Chem., 288, 2013
4BUR
DownloadVisualize
BU of 4bur by Molmil
Crystal structure of the reduced human Apoptosis inducing factor complexed with NAD
分子名称: APOPTOSIS INDUCING FACTOR 1, MITOCHONDRIAL, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Martinez-Julvez, M, Herguedas, B, Hermoso, J.A, Ferreira, P, Villanueva, R, Medina, M.
登録日2013-06-23
公開日2014-07-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Structural Insights Into the Coenzyme Mediated Monomer-Dimer Transition of the Pro-Apoptotic Apoptosis Inducing Factor.
Biochemistry, 53, 2014
4LDU
DownloadVisualize
BU of 4ldu by Molmil
Crystal structure of the DNA binding domain of Arabidopsis thaliana auxin response factor 5
分子名称: Auxin response factor 5, CHLORIDE ION
著者Boer, D.R, Freire-Rios, A, van den Berg, W.M.A, Weijers, D, Coll, M.
登録日2013-06-25
公開日2014-02-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014
4LDV
DownloadVisualize
BU of 4ldv by Molmil
Crystal structure of the DNA binding domain of A. thailana auxin response factor 1
分子名称: Auxin response factor 1, CHLORIDE ION, FORMIC ACID, ...
著者boer, D.R, Freire-Rios, A, van den Berg, W.M.A, Weijers, D, Coll, M.
登録日2013-06-25
公開日2014-02-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014
4BYY
DownloadVisualize
BU of 4byy by Molmil
Apo GlxR
分子名称: GLYCEROL, PHOSPHATE ION, TRANSCRIPTIONAL REGULATOR, ...
著者Pohl, E, Cann, M.J, Townsend, P.D, Money, V.A.
登録日2013-07-21
公開日2014-07-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献The Crystal Structures of Apo and Camp-Bound Glxr from Corynebacterium Glutamicum Reveal Structural and Dynamic Changes Upon Camp Binding in Crp/Fnr Family Transcription Factors.
Plos One, 9, 2014
3WG4
DownloadVisualize
BU of 3wg4 by Molmil
Crystal structure of Agrocybe cylindracea galectin mutant (N46A) with blood type A antigen tetraose
分子名称: DI(HYDROXYETHYL)ETHER, Galactoside-binding lectin, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R.
登録日2013-07-25
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity.
Febs Lett., 587, 2013
3WG3
DownloadVisualize
BU of 3wg3 by Molmil
Crystal structure of Agrocybe cylindracea galectin with blood type A antigen tetraose
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Galactoside-binding lectin, ...
著者Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R.
登録日2013-07-25
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity.
Febs Lett., 587, 2013
3WG1
DownloadVisualize
BU of 3wg1 by Molmil
Crystal structure of Agrocybe cylindracea galectin with lactose
分子名称: Galactoside-binding lectin, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R.
登録日2013-07-25
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity.
Febs Lett., 587, 2013
3WG2
DownloadVisualize
BU of 3wg2 by Molmil
Crystal structure of Agrocybe cylindracea galectin mutant (N46A)
分子名称: Galactoside-binding lectin, TRIETHYLENE GLYCOL
著者Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R.
登録日2013-07-25
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity.
Febs Lett., 587, 2013
4MCW
DownloadVisualize
BU of 4mcw by Molmil
Crystal structure of a HD-GYP domain (a cyclic-di-GMP phosphodiesterase) containing a tri-nuclear metal centre
分子名称: 1,2-ETHANEDIOL, FE (III) ION, IMIDAZOLE, ...
著者Bellini, D, Walsh, M.A, Oxford Protein Production Facility (OPPF)
登録日2013-08-21
公開日2014-02-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal structure of an HD-GYP domain cyclic-di-GMP phosphodiesterase reveals an enzyme with a novel trinuclear catalytic iron centre.
Mol.Microbiol., 91, 2014
4MDZ
DownloadVisualize
BU of 4mdz by Molmil
Crystal structure of a HD-GYP domain (a cyclic-di-GMP phosphodiesterase) containing a tri-nuclear metal centre
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), FE (III) ION, Metal dependent phosphohydrolase, ...
著者Bellini, D, Walsh, M.A, Oxford Protein Production Facility (OPPF)
登録日2013-08-23
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Crystal structure of an HD-GYP domain cyclic-di-GMP phosphodiesterase reveals an enzyme with a novel trinuclear catalytic iron centre.
Mol.Microbiol., 91, 2014
4ME4
DownloadVisualize
BU of 4me4 by Molmil
Crystal structure of a HD-GYP domain (a cyclic-di-GMP phosphodiesterase) containing a tri-nuclear metal centre
分子名称: FE (III) ION, GUANOSINE-5'-MONOPHOSPHATE, IMIDAZOLE, ...
著者Bellini, D, Walsh, M.A, Oxford Protein Production Facility (OPPF)
登録日2013-08-24
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of an HD-GYP domain cyclic-di-GMP phosphodiesterase reveals an enzyme with a novel trinuclear catalytic iron centre.
Mol.Microbiol., 91, 2014
4MFK
DownloadVisualize
BU of 4mfk by Molmil
The crystal structure of acyltransferase in complex with decanoyl-CoA
分子名称: Putative uncharacterized protein tcp24, SULFATE ION, decanoyl-CoA
著者Lyu, S.Y, Liu, Y.C, Chang, C.Y, Huang, C.J, Li, T.L.
登録日2013-08-28
公開日2014-09-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Multiple complexes of long aliphatic N-acyltransferases lead to synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide antibiotics, effectively killing vancomycin-resistant enterococcus
J.Am.Chem.Soc., 136, 2014
4MFZ
DownloadVisualize
BU of 4mfz by Molmil
The crystal structure of acyltransferase in complex with decanoyl-CoA
分子名称: Dbv8 protein, SODIUM ION, SULFATE ION, ...
著者Lyu, S.Y, Liu, Y.C, Chang, C.Y, Huang, C.J, Li, T.L.
登録日2013-08-28
公開日2014-09-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Multiple complexes of long aliphatic N-acyltransferases lead to synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide antibiotics, effectively killing vancomycin-resistant enterococcus
J.Am.Chem.Soc., 136, 2014
4MFP
DownloadVisualize
BU of 4mfp by Molmil
The crystal structure of acyltransferase in complex with decanoyl-CoA and Tei pseudoaglycone
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranose, COENZYME A, ...
著者Lyu, S.Y, Liu, Y.C, Chang, C.Y, Huang, C.J, Li, T.L.
登録日2013-08-28
公開日2014-09-03
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Multiple complexes of long aliphatic N-acyltransferases lead to synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide antibiotics, effectively killing vancomycin-resistant enterococcus
J.Am.Chem.Soc., 136, 2014

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon