PDB: 20505 件ウェブページステータス検索Chemie searchBIRD

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6R1B	Crystal structure of UgpB from Mycobacterium tuberculosis in complex with glycerophosphocholine 分子名称: 2-(((R)-2,3-DIHYDROXYPROPYL)PHOSPHORYLOXY)-N,N,N-TRIMETHYLETHANAMINIUM, GLYCEROL, MAGNESIUM ION, ... 著者 Fenn, J, Nepravishta, R, Guy, C.S, Harrison, J, Angulo, J, Cameron, A.D, Fullam, E. 登録日 2019-03-14 公開日 2019-09-04 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.27000213 Å) 主引用文献 Structural Basis of Glycerophosphodiester Recognition by theMycobacterium tuberculosisSubstrate-Binding Protein UgpB. Acs Chem.Biol., 14, 2019
6R31	Family 11 Carbohydrate-Binding Module from Clostridium thermocellum in complex with beta-1,3-1,4-mixed-linked tetrasaccharide 分子名称: CALCIUM ION, Endoglucanase H, PHOSPHATE ION, ... 著者 Ribeiro, D.O, Carvalho, A.L. 登録日 2019-03-19 公開日 2020-02-05 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Molecular basis for the preferential recognition of beta 1,3-1,4-glucans by the family 11 carbohydrate-binding module from Clostridium thermocellum. Febs J., 287, 2020
6R50	Crystal structure of holo PPEP-1(E143A/Y178F) in complex with substrate peptide Ac-EVNAPVP-CONH2 分子名称: ACE-GLU-VAL-ASN-ALA-PRO-VAL-LPD, Pro-Pro endopeptidase, ZINC ION 著者 Pichlo, C, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.807 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
6R5C	Crystal structure of PPEP-1(W103F/E143A/Y178F) in complex with substrate peptide Ac-EVNPPVP-CONH2 分子名称: ACE-GLU-VAL-ASN-PRO-PRO-VAL-LPD, Pro-Pro endopeptidase, ZINC ION 著者 Pichlo, C, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.881 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
6R4Y	Crystal structure of holo PPEP-1(E143A/Y178F) in complex with product peptide Ac-EVNP-CO2 (substrate peptide: Ac-EVNPAVP-CONH2) 分子名称: ACE-GLU-VAL-ASN-PRO, Pro-Pro endopeptidase, ZINC ION 著者 Pichlo, C, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.452 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
6R58	Crystal structure of PPEP-1(E143A/Y178F/E184A) in complex with substrate peptide Ac-EVNAPVP-CONH2 分子名称: ACE-GLU-VAL-ASN-ALA-PRO-VAL-LPD, NICKEL (II) ION, PHOSPHATE ION, ... 著者 Pichlo, C, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
6R51	Crystal structure of apo PPEP-1(E143A/Y178F) in complex with fibrinogen-derived substrate peptide Ac-SLRPAPP-CONH2 分子名称: ACE-SER-LEU-ARG-PRO-ALA-PRO-LPD, PHOSPHATE ION, Pro-Pro endopeptidase 著者 Pichlo, C, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
6R57	Crystal structure of PPEP-1(E143A/Y178F/E184A) in complex with substrate peptide Ac-EVNPPVP-CONH2 分子名称: ACE-GLU-VAL-ASN-PRO-PRO-VAL-LPD, Pro-Pro endopeptidase, ZINC ION 著者 Pichlo, C, Baumann, U. 登録日 2019-03-24 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.899 Å) 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
5TJT	T5 bacteriophage major capsid protein - one PB8 hexon 分子名称: Major capsid protein 著者 Conway, J, Huet, A. 登録日 2016-10-05 公開日 2017-02-22 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (9 Å) 主引用文献 High affinity anchoring of the decoration protein pb10 onto the bacteriophage T5 capsid. Sci Rep, 7, 2017
5TLQ	Model structure of the oxidized PaDsbA1 and 3-[(2-methylbenzyl)sulfanyl]-4H-1,2,4-triazol-4-amine complex 分子名称: 3-[(2-methylbenzyl)sulfanyl]-4H-1,2,4-triazol-4-amine, Thiol:disulfide interchange protein DsbA 著者 Mohanty, B, Rimmer, K.A, McMahon, R.M, Headey, S.J, Vazirani, M, Shouldice, S.R, Coincon, M, Tay, S, Morton, C.J, Simpson, J.S, Martin, J.L, Scanlon, M.S. 登録日 2016-10-11 公開日 2017-04-12 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Fragment library screening identifies hits that bind to the non-catalytic surface of Pseudomonas aeruginosa DsbA1. PLoS ONE, 12, 2017
5TJ1	Benenodin-1-dC5, state 1 分子名称: Benenodin-1 著者 Zong, C, Link, A.J. 登録日 2016-10-03 公開日 2017-07-19 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Lasso Peptide Benenodin-1 Is a Thermally Actuated [1]Rotaxane Switch. J. Am. Chem. Soc., 139, 2017
5TWW	Alpha Helix Nucleation by a Simple Cyclic Tetrapeptide 分子名称: Cyclic peptide ALA-ALA-ALA-UN1-ALA-ARG-ALA-ALA-ARG-ALA-ALA-ARG-ALA 著者 Hoang, H.N. 登録日 2016-11-14 公開日 2016-12-14 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 Alpha Helix Nucleation by a Simple Cyclic Tetrapeptide To Be Published
5U9K	Crystal structure of V71F mutant of the FKBP domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1) 分子名称: Aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1) 著者 Yadav, R.P, Gakhar, L, Liping, Y, Artemyev, N.O. 登録日 2016-12-16 公開日 2017-07-26 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Unique structural features of the AIPL1-FKBP domain that support prenyl lipid binding and underlie protein malfunction in blindness. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U3A	Ultra High Resolution Crystal Structure of Human Pancreatic Alpha Amylase 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ... 著者 Caner, S, Brayer, G.D. 登録日 2016-12-01 公開日 2017-12-06 最終更新日 2022-04-27 実験手法 X-RAY DIFFRACTION (0.95 Å) 主引用文献 Folding Then Binding vs Folding Through Binding in Macrocyclic Peptide Inhibitors of Human Pancreatic alpha-Amylase. Acs Chem.Biol., 14, 2019
5UEX	BRD4_BD2_A-1497627 分子名称: 17-{[ethyl(dihydroxy)-lambda~4~-sulfanyl]amino}-11,13-difluoro-2-methyl-6,7,8,9-tetrahydrodibenzo[4,5:7,8][1,6]dioxacyclododecino[3,2-c]pyridin-3(2H)-one, Bromodomain-containing protein 4 著者 Park, C.H. 登録日 2017-01-03 公開日 2017-05-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Fragment-Based, Structure-Enabled Discovery of Novel Pyridones and Pyridone Macrocycles as Potent Bromodomain and Extra-Terminal Domain (BET) Family Bromodomain Inhibitors. J. Med. Chem., 60, 2017
5TPC	Binding domain of BoNT/A complexed with ganglioside 分子名称: Botulinum neurotoxin type A, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose 著者 Berntsson, R.P.-A, Svensson, L.M, Stenmark, P. 登録日 2016-10-20 公開日 2017-01-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Glycans Confer Specificity to the Recognition of Ganglioside Receptors by Botulinum Neurotoxin A. J. Am. Chem. Soc., 139, 2017
5TXD	Structure of amyloid-beta derived peptide - NKGAIF 分子名称: Amyloid beta A4 protein, PHOSPHATE ION 著者 Sangwan, S, Sawaya, M.R, Eisenberg, D. 登録日 2016-11-16 公開日 2017-11-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.452 Å) 主引用文献 Distal amyloid beta-protein fragments template amyloid assembly. Protein Sci., 27, 2018
5TXH	Polymorphic form 2 of amyloid-beta derived peptide - IFAEDV 分子名称: IFAEDV, ISOPROPYL ALCOHOL 著者 Sangwan, S, Sawaya, M.R, Eisenberg, D. 登録日 2016-11-16 公開日 2017-11-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Distal amyloid beta-protein fragments template amyloid assembly. Protein Sci., 27, 2018
5UF3	Structure Effects of the Four-Adenine Loop of the Coliphage GA Replicase RNA Operator 分子名称: phage GA operator RNA hairpin 著者 Chang, A.T, Tran, M, DeJong, E, Nikonowicz, E.P. 登録日 2017-01-03 公開日 2017-05-31 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structure and Dynamics of the Tetra-A Loop and (A-A)-U Sequence Motif within the Coliphage GA Replicase RNA Operator. Biochemistry, 56, 2017
5U9A	Crystal structure of the FKBP domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1) 分子名称: Aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1) 著者 Yadav, R.P, Gakhar, L, Liping, Y, Artemyev, N.O. 登録日 2016-12-15 公開日 2017-07-26 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Unique structural features of the AIPL1-FKBP domain that support prenyl lipid binding and underlie protein malfunction in blindness. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U9J	Crystal structure of the FKBP domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1) complexed with geranyl geranyl pyrophoshate 分子名称: Aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1), GERAN-8-YL GERAN, ISOPROPYL ALCOHOL, ... 著者 Yadav, R.P, Gakhar, L, Liping, Y, Artemyev, N.O. 登録日 2016-12-16 公開日 2017-07-26 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Unique structural features of the AIPL1-FKBP domain that support prenyl lipid binding and underlie protein malfunction in blindness. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UEU	BRD4_BD2_A-1107604 分子名称: Bromodomain-containing protein 4, methyl [(6S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl]acetate 著者 Park, C.H. 登録日 2017-01-03 公開日 2017-05-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Fragment-Based, Structure-Enabled Discovery of Novel Pyridones and Pyridone Macrocycles as Potent Bromodomain and Extra-Terminal Domain (BET) Family Bromodomain Inhibitors. J. Med. Chem., 60, 2017
5UF0	BRD4_BD2-A-35165 分子名称: 2-methyl-5-(methylamino)-6-phenylpyridazin-3(2H)-one, Bromodomain-containing protein 4 著者 Park, C.H. 登録日 2017-01-03 公開日 2017-06-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Fragment-Based, Structure-Enabled Discovery of Novel Pyridones and Pyridone Macrocycles as Potent Bromodomain and Extra-Terminal Domain (BET) Family Bromodomain Inhibitors. J. Med. Chem., 60, 2017
5UHN	Crystal Structure of the Tyrosine Kinase Domain of FGF Receptor 2 harboring a N549H/E565A Double Gain-of-Function Mutation 分子名称: Fibroblast growth factor receptor 2, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ... 著者 Mohammadi, M, Chen, H. 登録日 2017-01-11 公開日 2017-02-22 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.909 Å) 主引用文献 Elucidation of a four-site allosteric network in fibroblast growth factor receptor tyrosine kinases. Elife, 6, 2017
5UHR	Crystal structure of (Cit)LANFLV heptapeptide segment from islet amyloid polypeptide (IAPP) incorporated into a macrocyclic beta-sheet template 分子名称: CHLORIDE ION, ORN-CIR-LEU-ALA-ASN-PHE-LEU-VAL-ORN-ILE-LYS-HAO-LYS-A8E 著者 Wang, Y, Kreutzer, A.G, Nowick, J.S. 登録日 2017-01-11 公開日 2017-07-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.798 Å) 主引用文献 A Tetramer Derived from Islet Amyloid Polypeptide. J. Org. Chem., 82, 2017

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