PDB: 55698 件ウェブページステータス検索Chemie searchBIRD

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6LE3	Crystal structure of gluconate 5-dehydrogenase from Lentibacter algarum 分子名称: ACETYL GROUP, Gluconate 5-dehydrogenase 著者 Yuan, H. 登録日 2019-11-23 公開日 2020-05-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of gluconate 5-dehydrogenase from Lentibacter algarum. Acta Crystallogr.,Sect.F, 76, 2020
2G0Y	Crystal Structure of a Lumenal Pentapeptide Repeat Protein from Cyanothece sp 51142 at 2.3 Angstrom Resolution. Tetragonal Crystal Form 分子名称: CALCIUM ION, pentapeptide repeat protein 著者 Kennedy, M.A, Ni, S, Buchko, G.W, Robinson, H. 登録日 2006-02-13 公開日 2006-11-07 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Characterization of two potentially universal turn motifs that shape the repeated five-residues fold - Crystal structure of a lumenal pentapeptide repeat protein from Cyanothece 51142 Protein Sci., 15, 2006
6L6M	HSP18.5 from E. histolytica 分子名称: Heat shock protein hsp20 family putative 著者 Kurre, D, Suguna, K. 登録日 2019-10-29 公開日 2020-11-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.28000379 Å) 主引用文献 Network of Entamoeba histolytica HSP18.5 dimers formed by two overlapping [IV]-X-[IV] motifs. Proteins, 2021
5HTO	Crystal structure of Plasmodium Vivax LDH in complex with a DNA aptamer called pL1 (tetrameric LDH in an asymmetric unit) 分子名称: DNA (30-MER), DNA (34-MER), L-lactate dehydrogenase, ... 著者 Choi, S.J, Ban, C. 登録日 2016-01-27 公開日 2016-10-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of a DNA aptamer bound to PvLDH elucidates novel single-stranded DNA structural elements for folding and recognition Sci Rep, 6, 2016
5HY2	Structure-function analysis of functionally diverse members of the cyclic amide hydrolase family of Toblerone fold enzymes 分子名称: Ring-opening amidohydrolase 著者 Peat, T.S, Balotra, S, Wilding, M, Newman, J, Scott, C. 登録日 2016-02-01 公開日 2017-02-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes. Appl. Environ. Microbiol., 83, 2017
5HXZ	Structure-function analysis of functionally diverse members of the cyclic amide hydrolase family of Toblerone fold enzymes 分子名称: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, Barbiturase, CHLORIDE ION, ... 著者 Peat, T.S, Balotra, S, Wilding, M, Newman, J, Scott, C. 登録日 2016-01-31 公開日 2017-02-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes. Appl. Environ. Microbiol., 83, 2017
2GH7	Epi-biotin complex with core streptavidin 分子名称: BIOTIN, EPI-BIOTIN, GLYCEROL, ... 著者 Le Trong, I, Aubert, D.G.L, Thomas, N.R, Stenkamp, R.E. 登録日 2006-03-26 公開日 2006-04-18 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 The high-resolution structure of (+)-epi-biotin bound to streptavidin. Acta Crystallogr.,Sect.D, 62, 2006
5HUE	DAHP synthase from Corynebacterium glutamicum in complex with tryptophan 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, ... 著者 Burschowsky, D, Heim, J.B, Thorbjoernsrud, H.V, Krengel, U. 登録日 2016-01-27 公開日 2017-08-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Inter-Enzyme Allosteric Regulation of Chorismate Mutase in Corynebacterium glutamicum: Structural Basis of Feedback Activation by Trp. Biochemistry, 57, 2018
5HY1	high resolution structure of barbiturase 分子名称: 1,3,5-triazine-2,4,6-triol, Barbiturase, CHLORIDE ION, ... 著者 Peat, T.S, Scott, C, Balotra, S, Wilding, M, Newman, J. 登録日 2016-02-01 公開日 2017-02-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes. Appl. Environ. Microbiol., 83, 2017
5HXU	Structure-function analysis of functionally diverse members of the cyclic amide hydrolase family of Toblerone fold enzymes 分子名称: (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, Barbiturase, CHLORIDE ION, ... 著者 Peat, T.S, Balotra, S, Wilding, M, Newman, J, Scott, C. 登録日 2016-01-31 公開日 2017-02-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 High-Resolution X-Ray Structures of Two Functionally Distinct Members of the Cyclic Amide Hydrolase Family of Toblerone Fold Enzymes. Appl. Environ. Microbiol., 83, 2017
6LJL	Crystal Structure of exoHep-Y390A/H555A complexed with a tetrasaccharide substrate 分子名称: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, CALCIUM ION, Heparinase II/III-like protein 著者 Zhang, Q.D, Cao, H.Y, Wei, L, Li, F.C, Zhang, Y.Z. 登録日 2019-12-17 公開日 2020-12-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Discovery of exolytic heparinases and their catalytic mechanism and potential application. Nat Commun, 12, 2021
2G9K	Human Transthyretin (TTR) Complexed with Hydroxylated polychlorinated Biphenyl-4-hydroxy-2',3,3',4',5-Pentachlorobiphenyl 分子名称: 2',3,3',4',5-PENTACHLOROBIPHENYL-4-OL, Transthyretin 著者 Palaninathan, S.K, Smith, C, Safe, S.H, Kelly, J.W, Sacchettini, J.C. 登録日 2006-03-06 公開日 2006-03-14 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Hydroxylated polychlorinated biphenyls selectively bind transthyretin in blood and inhibit amyloidogenesis: rationalizing rodent PCB toxicity Chem.Biol., 11, 2004
6LLN	citronellol catabolism dehydrogenase (AtuB) [Pseudomonas aeruginosa PAO1] 分子名称: Putative dehydrogenase involved in catabolism of citronellol 著者 Zhang, Q, Bartlam, M. 登録日 2019-12-23 公開日 2020-02-05 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural characterization of the Pseudomonas aeruginosa dehydrogenase AtuB involved in citronellol and geraniol catabolism. Biochem.Biophys.Res.Commun., 523, 2020
6LRG	Crystal Structure of the Ternary Complex of AgrE with Ornithine and NAD+ 分子名称: Alr4995 protein, L-ornithine, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Lee, H, Rhee, S. 登録日 2020-01-16 公開日 2020-04-01 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.41218114 Å) 主引用文献 Structural and mutational analyses of the bifunctional arginine dihydrolase and ornithine cyclodeaminase AgrE from the cyanobacteriumAnabaena. J.Biol.Chem., 295, 2020
2GH2	1.5 A Resolution R. Norvegicus Cysteine Dioxygenase Structure Crystallized in the Presence of Cysteine 分子名称: Cysteine dioxygenase type I, FE (III) ION, SULFATE ION 著者 Simmons, C.R, Karplus, P.A, Stipanuk, M.H. 登録日 2006-03-24 公開日 2006-04-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal Structure of Mammalian Cysteine Dioxygenase: A NOVEL MONONUCLEAR IRON CENTER FOR CYSTEINE THIOL OXIDATION. J.Biol.Chem., 281, 2006
6M53	Crystal structure of 2, 3-dihydroxybenzoic acid decarboxylase from Fusarium oxysporum 分子名称: 2,3-dihydroxybenzoate decarboxylase, GLYCEROL, ZINC ION 著者 Song, M.K, Feng, J.H, Liu, W.D, Wu, Q.Q, Zhu, D.M. 登録日 2020-03-09 公開日 2020-07-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 2,3-Dihydroxybenzoic Acid Decarboxylase from Fusarium oxysporum: Crystal Structures and Substrate Recognition Mechanism. Chembiochem, 21, 2020
5IRW	Crystal structure of avidin in complex with 1-desthiobiotinylpyrene 分子名称: 1-desthiobiotinylpyrene, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin 著者 Strzelczyk, P, Bujacz, G. 登録日 2016-03-14 公開日 2016-10-12 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural Characterization of the Avidin Interactions with Fluorescent Pyrene-Conjugates: 1-Biotinylpyrene and 1-Desthiobiotinylpyrene. Molecules, 21, 2016
5I01	Structure of phosphoheptose isomerase GmhA from Neisseria gonorrhoeae 分子名称: Phosphoheptose isomerase, ZINC ION 著者 Wierzbicki, I.H, Sikora, A.E, Korotkov, K.V. 登録日 2016-02-03 公開日 2016-02-17 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.37 Å) 主引用文献 Functional and structural studies on the Neisseria gonorrhoeae GmhA, the first enzyme in the glycero-manno-heptose biosynthesis pathways, demonstrate a critical role in lipooligosaccharide synthesis and gonococcal viability. Microbiologyopen, 6, 2017
6M1W	Structure of the 2-Aminoisobutyric acid Monooxygenase Hydroxylase 分子名称: Amidohydrolase, CHLORIDE ION, FE (III) ION, ... 著者 Hibi, M, Mikami, B, Ogawa, J. 登録日 2020-02-26 公開日 2021-01-06 最終更新日 2021-01-27 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 A three-component monooxygenase from Rhodococcus wratislaviensis may expand industrial applications of bacterial enzymes. Commun Biol, 4, 2021
5IG5	Crystal structure of N. vectensis CaMKII-B hub at pH 4.2 分子名称: CaMKII-B hub 著者 Bhattacharyya, M, Gee, C.L, Barros, T, Kuriyan, J. 登録日 2016-02-26 公開日 2016-03-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Molecular mechanism of activation-triggered subunit exchange in Ca(2+)/calmodulin-dependent protein kinase II. Elife, 5, 2016
2JER	Agmatine deiminase of Enterococcus faecalis catalyzing its reaction. 分子名称: AGMATINE DEIMINASE 著者 Tavarez, S, Llacer, J.L, Rubio, V. 登録日 2007-01-19 公開日 2007-01-30 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 The Gene Cluster for Agmatine Catabolism of Enterococcus Faecalis: Study of Recombinant Putrescine Transcarbamylase and Agmatine Deiminase and a Snapshot of Agmatine Deiminase Catalyzing its Reaction. J.Bacteriol., 189, 2007
5IHH	Crystal structure of human transthyretin in complex with luteolin-MeO at 1.35 A resolution 分子名称: 2-(3,4-dihydroxyphenyl)-5-hydroxy-7-methoxy-4H-1-chromen-4-one, SODIUM ION, Transthyretin 著者 Begum, A, Nilsson, L, Olofsson, A, Sauer-Eriksson, A.E. 登録日 2016-02-29 公開日 2016-04-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Modifications of the 7-Hydroxyl Group of the Transthyretin Ligand Luteolin Provide Mechanistic Insights into Its Binding Properties and High Plasma Specificity. Plos One, 11, 2016
6M2I	Structure of the 2-Aminoisobutyric acid Monooxygenase Hydroxylase 分子名称: 1,2-ETHANEDIOL, Amidohydrolase, FE (III) ION, ... 著者 Hibi, M, Mikami, B, Ogawa, J. 登録日 2020-02-27 公開日 2021-01-06 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 A three-component monooxygenase from Rhodococcus wratislaviensis may expand industrial applications of bacterial enzymes. Commun Biol, 4, 2021
2HK1	Crystal structure of D-psicose 3-epimerase (DPEase) in the presence of D-fructose 分子名称: D-PSICOSE 3-EPIMERASE, D-fructose, MANGANESE (II) ION 著者 Kim, K, Kim, H.J, Oh, D.K, Cha, S.S, Rhee, S. 登録日 2006-07-03 公開日 2006-08-29 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal Structure of d-Psicose 3-epimerase from Agrobacterium tumefaciens and its Complex with True Substrate d-Fructose: A Pivotal Role of Metal in Catalysis, an Active Site for the Non-phosphorylated Substrate, and its Conformational Changes J.Mol.Biol., 361, 2006
8BWY	In situ outer dynein arm from Chlamydomonas reinhardtii in a pre-power stroke state 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Calmodulin, ... 著者 Zimmermann, N.E.L, Noga, A, Obbineni, J.M, Ishikawa, T. 登録日 2022-12-07 公開日 2023-05-10 最終更新日 2023-06-28 実験手法 ELECTRON MICROSCOPY (38 Å) 主引用文献 ATP-induced conformational change of axonemal outer dynein arms revealed by cryo-electron tomography. Embo J., 42, 2023

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