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5ZR6
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Manganese-dependent transcriptional repressor complex with manganese
分子名称: MANGANESE (II) ION, Metal-dependent transcriptional regulator
著者Cong, X.Y, Xu, S.J, Wang, J.B.
登録日2018-04-23
公開日2019-03-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of manganese-dependent transcriptional repressor MntR (Rv2788) from Mycobacterium tuberculosis in apo and manganese bound forms.
Biochem. Biophys. Res. Commun., 501, 2018
2QA8
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BU of 2qa8 by Molmil
Crystal Structure of the Estrogen Receptor Alpha Ligand Binding Domain Mutant 537S Complexed with Genistein
分子名称: Estrogen receptor, GENISTEIN, nuclear receptor coactivator 2
著者Nettles, K.W, Bruning, J.B, Nowak, J, Sharma, S.K, Hahm, J.B, Shi, Y, Kulp, K, Hochberg, R.B, Zhou, H, Katzenellenbogen, J.A, Katzenellenbogen, B.S, Kim, Y, Joachmiak, A, Greene, G.L.
登録日2007-06-14
公開日2008-03-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献NFkappaB selectivity of estrogen receptor ligands revealed by comparative crystallographic analyses
Nat.Chem.Biol., 4, 2008
6DO7
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NMR solution structure of wild type hFABP1 with GW7647
分子名称: Fatty acid-binding protein, liver
著者Scanlon, M.J, Mohanty, B, Doak, B.C, Patil, R.
登録日2018-06-09
公開日2019-01-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A ligand-induced structural change in fatty acid-binding protein 1 is associated with potentiation of peroxisome proliferator-activated receptor alpha agonists.
J. Biol. Chem., 294, 2019
6A0H
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BU of 6a0h by Molmil
Crystal structure of human protein N-terminal asparagine amidohydrolase (NTAN1) C75S mutant with Asn-Leu-Ala-Ala-Arg peptide
分子名称: 5-mer peptide ASN-LEU-ALA-ALA-ARG, GLYCEROL, PHOSPHATE ION, ...
著者Park, J.S, Han, B.W.
登録日2018-06-05
公開日2019-12-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.185 Å)
主引用文献Structural Analyses on the Deamidation of N-Terminal Asn in the Human N-Degron Pathway.
Biomolecules, 10, 2020
1N1M
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BU of 1n1m by Molmil
Human Dipeptidyl Peptidase IV/CD26 in complex with an inhibitor
分子名称: 2-AMINO-3-METHYL-1-PYRROLIDIN-1-YL-BUTAN-1-ONE, 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Rasmussen, H.B, Branner, S, Wiberg, F.C, Wagtmann, N.R.
登録日2002-10-18
公開日2002-12-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of human dipeptidyl peptidase IV/CD26 in complex with a substrate analogue
Nat.Struct.Biol., 10, 2003
2QGW
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BU of 2qgw by Molmil
Crystal Structure of the Estrogen Receptor Alpha Ligand Binding Domain Complexed with a Chloro-Indazole Compound
分子名称: 3-CHLORO-2-(4-HYDROXYPHENYL)-2H-INDAZOL-5-OL, Estrogen receptor, Nuclear receptor coactivator 2
著者Nettles, K.W, Bruning, J.B, Nowak, J, Sharma, S.K, Hahm, J.B, Shi, Y, Kulp, K, Hochberg, R.B, Zhou, H, Katzenellenbogen, J.A, Katzenellenbogen, B.S, Kim, Y, Joachmiak, A, Greene, G.L.
登録日2007-06-29
公開日2008-03-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献NFkappaB selectivity of estrogen receptor ligands revealed by comparative crystallographic analyses
Nat.Chem.Biol., 4, 2008
6U6V
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BU of 6u6v by Molmil
Crystal structure of human PD-1H / VISTA
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, V-type immunoglobulin domain-containing suppressor of T-cell activation
著者Slater, B.T, Han, X, Chen, L, Xiong, Y.
登録日2019-08-30
公開日2020-01-01
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural insight into T cell coinhibition by PD-1H (VISTA).
Proc.Natl.Acad.Sci.USA, 117, 2020
3HCS
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BU of 3hcs by Molmil
Crystal structure of the N-terminal domain of TRAF6
分子名称: TNF receptor-associated factor 6, ZINC ION
著者Yin, Q, Lin, S.-C, Lamothe, B, Lu, M, Lo, Y.-C, Hura, G, Zheng, L, Rich, R.L, Campos, A.D, Myszka, D.G, Lenardo, M.J, Darnay, B.G, Wu, H.
登録日2009-05-06
公開日2009-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献E2 interaction and dimerization in the crystal structure of TRAF6.
Nat.Struct.Mol.Biol., 16, 2009
6A3N
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BU of 6a3n by Molmil
Crystal structure of the PDE9 catalytic domain in complex with inhibitor 2
分子名称: 1-cyclopentyl-6-({(2R)-1-[(3S)-3-fluoropyrrolidin-1-yl]-1-oxopropan-2-yl}amino)-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
著者Wu, Y.N, Zhou, Q, Chen, Y.P, Luo, H.B.
登録日2018-06-15
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Discovery of Potent, Selective, and Orally Bioavailable Inhibitors against Phosphodiesterase-9, a Novel Target for the Treatment of Vascular Dementia.
J. Med. Chem., 62, 2019
8RO4
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BU of 8ro4 by Molmil
The crystal structure of 2-hydroxy-3-keto-glucal hydratase AtHYD from A. tumefaciens
分子名称: 2-hydroxy-3-keto-glucal hydratase, MANGANESE (II) ION
著者Grininger, C, Bitter, J, Pfeiffer, M, Nidetzky, B, Pavkov-Keller, T.
登録日2024-01-11
公開日2024-08-07
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Enzyme Machinery for Bacterial Glucoside Metabolism through a Conserved Non-hydrolytic Pathway.
Angew.Chem.Int.Ed.Engl., 2024
5XE7
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BU of 5xe7 by Molmil
Crystal structure of Mycobacterium tuberculosis extracytoplasmic function sigma factor SigJ
分子名称: ECF RNA polymerase sigma factor SigJ
著者Goutam, K, Gopal, B.
登録日2017-04-01
公開日2017-07-19
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.162 Å)
主引用文献The fused SnoaL_2 domain in the Mycobacterium tuberculosis sigma factor sigma J modulates promoter recognition
Nucleic Acids Res., 45, 2017
4GGH
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BU of 4ggh by Molmil
Crystal structure of an enolase family member from vibrio harveyi (efi-target 501692) with homology to mannonate dehydratase, with mg, hepes, and ethylene glycol bound (ordered loops, space group c2221)
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2012-08-06
公開日2012-09-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of an enolase family member from vibrio harveyi (efi-target 501692) with homology to mannonate dehydratase, with mg, hepes, and ethylene glycol bound (ordered loops, space group c2221)
To be Published
8BJM
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BU of 8bjm by Molmil
Human full length RAD52 undecamer.
分子名称: DNA repair protein RAD52 homolog
著者Marotta, R, Balboni, B, Girotto, S, Cavalli, A.
登録日2022-11-04
公開日2023-11-15
最終更新日2024-08-14
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献An integrative structural study of the human full-length RAD52 at 2.2 angstrom resolution.
Commun Biol, 7, 2024
5ZW9
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BU of 5zw9 by Molmil
Crystal structure of Pyridoxal kinase (PdxK) from Salmonella typhimurium
分子名称: 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DI(HYDROXYETHYL)ETHER, ...
著者Deka, G, Benazir, J.F, Kalyani, J.N, Savithri, H.S, Murthy, M.R.N.
登録日2018-05-14
公開日2019-05-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and functional studies on Salmonella typhimurium pyridoxal kinase: the first structural evidence for the formation of Schiff base with the substrate.
Febs J., 286, 2019
5DS5
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BU of 5ds5 by Molmil
Crystal structure the Escherichia coli Cas1-Cas2 complex bound to protospacer DNA and Mg
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (28-MER), ...
著者Nunez, J.K, Harrington, L.B, Kranzusch, P.J, Engelman, A.N, Doudna, J.A.
登録日2015-09-16
公開日2015-10-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.951 Å)
主引用文献Foreign DNA capture during CRISPR-Cas adaptive immunity.
Nature, 527, 2015
6RSU
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BU of 6rsu by Molmil
TBK1 in complex with Inhibitor compound 35
分子名称: 3,3,3-tris(fluoranyl)-1-[4-[(1~{R})-1-[2-[[(2~{S})-5-(5-propan-2-yloxypyrimidin-4-yl)-2,3-dihydro-1~{H}-benzimidazol-2-yl]amino]pyridin-4-yl]ethyl]piperazin-1-yl]propan-1-one, Serine/threonine-protein kinase TBK1
著者Panne, D, Hillig, R.C, Rengachari, S.
登録日2019-05-22
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Discovery of BAY-985, a Highly Selective TBK1/IKK epsilon Inhibitor.
J.Med.Chem., 63, 2020
6DXY
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BU of 6dxy by Molmil
Murine N-acylethanolamine-hydrolyzing acid amidase (NAAA)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CHLORIDE ION, ...
著者Gorelik, A, Gebai, A, Illes, K, Piomelli, D, Nagar, B.
登録日2018-07-01
公開日2018-09-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.851 Å)
主引用文献Molecular mechanism of activation of the immunoregulatory amidase NAAA.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6RTB
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BU of 6rtb by Molmil
cryo-em structure of alpha-synuclein fibril polymorph 2B
分子名称: Alpha-synuclein
著者Guerrero-Ferreira, R, Taylor, N.M.I, Arteni, A.A, Melki, R, Meier, B.H, Bockmann, A, Bousset, L, Stahlberg, H.
登録日2019-05-22
公開日2019-06-26
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Two new polymorphic structures of human full-length alpha-synuclein fibrils solved by cryo-electron microscopy.
Elife, 8, 2019
7V7H
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BU of 7v7h by Molmil
Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), dimer of S trimer conformation 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D.
登録日2021-08-21
公開日2021-10-06
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), dimer of S trimer conformation 1
To Be Published
7V7J
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BU of 7v7j by Molmil
Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), dimer of S trimer conformation 3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D.
登録日2021-08-21
公開日2021-10-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), dimer of S trimer conformation 3
To Be Published
5JQZ
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BU of 5jqz by Molmil
Designed two-ring homotetramer at 3.8A resolution
分子名称: De novo designed homotetramer
著者Sankaran, B, Zwart, P.H, Pereira, J.H, Baker, D, Oberdorfer, G, Boyken, S.E, Chen, Z.
登録日2016-05-05
公開日2016-06-29
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.83 Å)
主引用文献De novo design of protein homo-oligomers with modular hydrogen-bond network-mediated specificity.
Science, 352, 2016
6IJR
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BU of 6ijr by Molmil
Human PPARgamma ligand binding domain complexed with SB1495
分子名称: 16 mer peptide from Nuclear receptor coactivator 1, N-{[3-({[(1S,2R)-2-{[(2E)-2-cyano-4,4-dimethylpent-2-enoyl]amino}cyclopentyl]oxy}methyl)phenyl]methyl}-4-[(4-methylpiperazin-1-yl)methyl]benzamide, Peroxisome proliferator-activated receptor gamma
著者Jang, J.Y, Han, B.W.
登録日2018-10-11
公開日2019-10-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural basis for the inhibitory effects of a novel reversible covalent ligand on PPAR gamma phosphorylation.
Sci Rep, 9, 2019
7V7I
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BU of 7v7i by Molmil
Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), dimer of S trimer conformation 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D.
登録日2021-08-21
公開日2021-10-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), dimer of S trimer conformation 2
To Be Published
6DQ5
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BU of 6dq5 by Molmil
LINKED KDM5A JMJ DOMAIN BOUND TO THE INHIBITOR N43 i.e. 3-((6-(4-acryloyl-1,4-diazepan-1-yl)-2-(pyridin-2-yl)pyrimidin-4-yl)amino)propanoic acid
分子名称: Linked KDM5A Jmj Domain, MANGANESE (II) ION, N-[6-(4-acryloyl-1,4-diazepan-1-yl)-2-(pyridin-2-yl)pyrimidin-4-yl]-beta-alanine
著者Horton, J.R, Cheng, X.
登録日2018-06-10
公開日2018-11-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structure-Based Engineering of Irreversible Inhibitors against Histone Lysine Demethylase KDM5A.
J. Med. Chem., 61, 2018
6U9G
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Structure of Francisella PdpA-VgrG Complex, half-lidded
分子名称: PdpA, VgrG
著者Yang, X, Clemens, D.L, Lee, B.-Y, Cui, Y, Zhou, Z.H, Horwitz, M.A.
登録日2019-09-08
公開日2019-10-23
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.98 Å)
主引用文献Atomic Structure of the Francisella T6SS Central Spike Reveals a Unique alpha-Helical Lid and a Putative Cargo.
Structure, 27, 2019

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