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3CBC
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BU of 3cbc by Molmil
Crystal structure of Siderocalin (NGAL, Lipocalin 2) Y106F complexed with Ferric Enterobactin
分子名称: 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, GLYCEROL, Neutrophil gelatinase-associated lipocalin, ...
著者Clifton, M.C, Pizaro, J.C, Strong, R.K.
登録日2008-02-21
公開日2008-09-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献The siderocalin/enterobactin interaction: a link between mammalian immunity and bacterial iron transport.
J.Am.Chem.Soc., 130, 2008
3C4J
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BU of 3c4j by Molmil
ABC protein ArtP in complex with ATP-gamma-S
分子名称: Amino acid ABC transporter (ArtP), MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Thaben, P.F, Eckey, V, Scheffel, F, Saenger, W, Schneider, E, Vahedi-Faridi, A.
登録日2008-01-30
公開日2009-02-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal Structures of the ATP-binding cassette (ABC) Protein ArtP from Geobacillus stearothermophilus in complexes with nucleotides and nucleotide analogs reveal an intermediate semiclosed dimer in the post hydrolyses state and an asymmetry in the dimerisation region
To be Published
8R8S
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BU of 8r8s by Molmil
Low pH (5.5) as-isolated MSOX movie series dataset 1 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [0.57 MGy]
分子名称: COPPER (II) ION, Copper-containing nitrite reductase, SULFATE ION, ...
著者Ferroni, F.M, Antonyuk, S.V, Rose, S.L, Eady, R.R, Hasnain, S.S.
登録日2023-11-29
公開日2024-07-24
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (1.11 Å)
主引用文献Spectroscopically Validated pH-dependent MSOX Movies Provide Detailed Mechanism of Copper Nitrite Reductases.
J.Mol.Biol., 436, 2024
6HCP
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BU of 6hcp by Molmil
Crystal structure of BauA, the Ferric preacinetobactin receptor from Acinetobacter baumannii
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-ETHANEDIOL, BauA, ...
著者Moynie, L, Naismith, J.H.
登録日2018-08-16
公開日2018-10-10
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Preacinetobactin not acinetobactin is essential for iron uptake by the BauA transporter of the pathogenAcinetobacter baumannii.
Elife, 7, 2018
3BK6
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BU of 3bk6 by Molmil
Crystal structure of a core domain of stomatin from Pyrococcus horikoshii
分子名称: PH stomatin
著者Yokoyama, H, Fujii, S, Matsui, I.
登録日2007-12-05
公開日2008-02-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of a core domain of stomatin from Pyrococcus horikoshii Illustrates a novel trimeric and coiled-coil fold
J.Mol.Biol., 376, 2008
8RFU
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BU of 8rfu by Molmil
Low pH (5.5) nitrite-bound MSOX movie series dataset 40 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [24.4 MGy] - water ligand + decarboxylated AspCAT (final)
分子名称: COPPER (II) ION, Copper-containing nitrite reductase, NITRITE ION, ...
著者Rose, S.L, Ferroni, F.M, Antonyuk, S.V, Eady, R.R, Hasnain, S.S.
登録日2023-12-13
公開日2024-07-24
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Spectroscopically Validated pH-dependent MSOX Movies Provide Detailed Mechanism of Copper Nitrite Reductases.
J.Mol.Biol., 436, 2024
3C5C
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BU of 3c5c by Molmil
Crystal structure of human Ras-like, family 12 protein in complex with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RAS-like protein 12, ...
著者Shen, L, Tong, Y, Tempel, W, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2008-01-31
公開日2008-02-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of human Ras-like, family 12 protein in complex with GDP.
To be Published
3BL1
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BU of 3bl1 by Molmil
Carbonic anhydrase inhibitors. Sulfonamide diuretics revisited old leads for new applications
分子名称: 4-chloro-N-[(2S)-2-methyl-2,3-dihydro-1H-indol-1-yl]-3-sulfamoylbenzamide, Carbonic anhydrase 2, MERCURY (II) ION, ...
著者Temperini, C, Cecchi, A, Supuran, C.T.
登録日2007-12-10
公開日2008-07-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Carbonic anhydrase inhibitors. Interaction of indapamide and related diuretics with 12 mammalian isozymes and X-ray crystallographic studies for the indapamide-isozyme II adduct.
Bioorg.Med.Chem.Lett., 18, 2008
3C7H
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BU of 3c7h by Molmil
Crystal structure of glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from Bacillus subtilis in complex with AXOS-4-0.5.
分子名称: CALCIUM ION, Endo-1,4-beta-xylanase, FORMIC ACID, ...
著者Vandermarliere, E, Bourgois, T.M, Winn, M.D, Van Campenhout, S, Volckaert, G, Strelkov, S.V, Delcour, J.A, Rabijns, A, Courtin, C.M.
登録日2008-02-07
公開日2008-11-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase in complex with xylotetraose reveals a different binding mechanism compared with other members of the same family.
Biochem.J., 418, 2009
8R8M
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BU of 8r8m by Molmil
70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S16, ...
著者Koller, T.O, Wilson, D.N.
登録日2023-11-29
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Paenilamicins from the honey bee pathogen Paenibacillus larvae are context-specific translocation inhibitors of protein synthesis.
Biorxiv, 2024
5KBG
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BU of 5kbg by Molmil
CRYSTAL STRUCTURE OF THE AROMATIC SENSOR DOMAIN OF MOPR IN COMPLEX WITH OCRESOL
分子名称: MopR, ZINC ION, o-cresol
著者Ray, S, Anand, R, Panjikar, S.
登録日2016-06-03
公開日2016-07-13
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis of Selective Aromatic Pollutant Sensing by the Effector Binding Domain of MopR, an NtrC Family Transcriptional Regulator.
Acs Chem.Biol., 11, 2016
8R6C
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BU of 8r6c by Molmil
70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S16, ...
著者Koller, T.O, Wilson, D.N.
登録日2023-11-22
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Paenilamicins from the honey bee pathogen Paenibacillus larvae are context-specific translocation inhibitors of protein synthesis.
Biorxiv, 2024
8RFT
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BU of 8rft by Molmil
Low pH (5.5) nitrite-bound MSOX movie series dataset 17 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [10.37 MGy] - water ligand + decarboxylated AspCAT
分子名称: COPPER (II) ION, Copper-containing nitrite reductase, NITRITE ION, ...
著者Rose, S.L, Ferroni, F.M, Antonyuk, S.V, Eady, R.R, Hasnain, S.S.
登録日2023-12-13
公開日2024-07-24
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Spectroscopically Validated pH-dependent MSOX Movies Provide Detailed Mechanism of Copper Nitrite Reductases.
J.Mol.Biol., 436, 2024
3BO3
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BU of 3bo3 by Molmil
A relaxed active site following exon ligation by a group I intron
分子名称: Group I intron P9, MAGNESIUM ION, POTASSIUM ION, ...
著者Lipchock, S.V, Strobel, S.A.
登録日2007-12-17
公開日2008-04-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献A relaxed active site after exon ligation by the group I intron
Proc.Natl.Acad.Sci.Usa, 105, 2008
8RGD
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BU of 8rgd by Molmil
High pH (8.0) nitrite-bound MSOX movie series dataset 15 of the copper nitrite reductase from Bradyrhizobium sp. ORS375 (two-domain) [10.2 MGy]
分子名称: CARBON DIOXIDE, COPPER (II) ION, Copper-containing nitrite reductase, ...
著者Rose, S.L, Ferroni, F.M, Antonyuk, S.V, Eady, R.R, Hasnain, S.S.
登録日2023-12-13
公開日2024-07-24
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Spectroscopically Validated pH-dependent MSOX Movies Provide Detailed Mechanism of Copper Nitrite Reductases.
J.Mol.Biol., 436, 2024
5K28
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BU of 5k28 by Molmil
Structure of the unbound SH3 domain of MLK3
分子名称: Mitogen-activated protein kinase kinase kinase 11
著者Kall, S.K, Lavie, A.
登録日2016-05-18
公開日2017-12-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Identification of two distinct peptide-binding pockets in the SH3 domain of human mixed-lineage kinase 3.
J. Biol. Chem., 293, 2018
3BOI
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BU of 3boi by Molmil
Snow Flea Antifreeze Protein Racemate
分子名称: 6.5 kDa glycine-rich antifreeze protein
著者Pentelute, B.L, Kent, S.B.H, Gates, Z.P, Tereshko, V, Kossiakoff, A.A, Kurutz, J, Dashnau, J, Vaderkooi, J.M.
登録日2007-12-17
公開日2008-09-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献X-ray structure of snow flea antifreeze protein determined by racemic crystallization of synthetic protein enantiomers
J.Am.Chem.Soc., 130, 2008
5KDU
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BU of 5kdu by Molmil
ZmpB metallopeptidase in complex with a2,6-Sialyl T-antigen
分子名称: 1,2-ETHANEDIOL, F5/8 type C domain protein, SERINE, ...
著者Noach, I, Ficko-Blean, E, Stuart, C, Boraston, A.B.
登録日2016-06-08
公開日2017-01-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Recognition of protein-linked glycans as a determinant of peptidase activity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3BOS
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BU of 3bos by Molmil
Crystal structure of a putative dna replication regulator HDA (SAMA_1916) from Shewanella amazonensis sb2b at 1.75 A resolution
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CYTIDINE-5'-DIPHOSPHATE, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2007-12-17
公開日2008-01-15
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A structural basis for the regulatory inactivation of DnaA.
J.Mol.Biol., 385, 2009
8RFW
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BU of 8rfw by Molmil
High pH (8.0) as-isolated MSOX movie series dataset 2 of the copper nitrite reductase from Bradyrhizobium sp. ORS375 (two-domain) [0.82 MGy]
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, COPPER (II) ION, Copper-containing nitrite reductase, ...
著者Rose, S.L, Ferroni, F.M, Antonyuk, S.V, Eady, R.R, Hasnain, S.S.
登録日2023-12-13
公開日2024-07-24
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Spectroscopically Validated pH-dependent MSOX Movies Provide Detailed Mechanism of Copper Nitrite Reductases.
J.Mol.Biol., 436, 2024
3BL7
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BU of 3bl7 by Molmil
Synthetic Gene Encoded DcpS bound to inhibitor DG156844
分子名称: 5-{[1-(2-fluorobenzyl)piperidin-4-yl]methoxy}quinazoline-2,4-diamine, Scavenger mRNA-decapping enzyme DcpS
著者Staker, B.L, Christensen, J, Stewart, L, Accelerated Technologies Center for Gene to 3D Structure (ATCG3D)
登録日2007-12-10
公開日2008-10-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献DcpS as a therapeutic target for spinal muscular atrophy.
Acs Chem.Biol., 3, 2008
7SF9
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BU of 7sf9 by Molmil
Branchiostoma Floridae Violet Fluorescent Protein
分子名称: Violet Fluorescent Protein
著者Pletnev, S, Pletneva, N, Pletnev, V.Z, Muslinkina, L.
登録日2021-10-03
公開日2022-03-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A novel violet fluorescent protein contains a unique oxidized tyrosine as the simplest chromophore ever reported in fluorescent proteins.
Protein Sci., 31, 2022
3BLK
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BU of 3blk by Molmil
Role of aromatic residues in starch binding
分子名称: 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 5-HYDROXYMETHYL-CHONDURITOL, Alpha-amylase 1, ...
著者Ramasubbu, N.
登録日2007-12-11
公開日2008-11-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-function relationships in human salivary alpha-amylase: role of aromatic residues in a secondary binding site
Biologia, 63, 2008
3BQ2
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BU of 3bq2 by Molmil
Post-insertion binary complex of Dbh DNA polymerase
分子名称: CALCIUM ION, DNA (5'-D(*DGP*DAP*DAP*DGP*DCP*DCP*DGP*DGP*DCP*DGP*DG)-3'), DNA (5'-D(*DTP*DTP*DCP*DCP*DGP*DCP*DCP*DCP*DGP*DGP*DCP*DTP*DTP*DCP*DC)-3'), ...
著者Pata, J.D, Wilson, R.C.
登録日2007-12-19
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insights into the generation of single-base deletions by the Y family DNA polymerase dbh.
Mol.Cell, 29, 2008
1D2P
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BU of 1d2p by Molmil
CRYSTAL STRUCTURE OF TWO B REPEAT UNITS (B1B2) OF THE COLLAGEN BINDING PROTEIN (CNA) OF STAPHYLOCOCCUS AUREUS
分子名称: COLLAGEN ADHESIN
著者Deivanayagam, C.C.S, Rich, R.L, Hook, M, Narayana, S.V.L.
登録日1999-09-25
公開日2000-09-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Novel fold and assembly of the repetitive B region of the Staphylococcus aureus collagen-binding surface protein.
Structure Fold.Des., 8, 2000

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