PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

---

7ATQ	Structure of EstD11 in complex with cyclohexane carboxylic acid 分子名称: ACETATE ION, EstD11, FORMIC ACID, ... 著者 Miguel-Ruano, V, Rivera, I, Hermoso, J.A. 登録日 2020-10-30 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Biochemical and Structural Characterization of a novel thermophilic esterase EstD11 provide catalytic insights for the HSL family. Comput Struct Biotechnol J, 19, 2021
7AT4	Structure of EstD11 in complex with Naproxen 分子名称: (2R)-2-(6-methoxynaphthalen-2-yl)propanoic acid, EstD11, FORMIC ACID 著者 Miguel-Ruano, V, Rivera, I, Hermoso, J.A. 登録日 2020-10-28 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Biochemical and Structural Characterization of a novel thermophilic esterase EstD11 provide catalytic insights for the HSL family. Comput Struct Biotechnol J, 19, 2021
7AUY	Structure of EstD11 in complex with Fluorescein 分子名称: EstD11, FLUORESCIN, FORMIC ACID 著者 Miguel-Ruano, V, Rivera, I, Hermoso, J.A. 登録日 2020-11-03 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Biochemical and Structural Characterization of a novel thermophilic esterase EstD11 provide catalytic insights for the HSL family. Comput Struct Biotechnol J, 19, 2021
5F48	Crystal structure of an aminoglycoside acetyltransferase meta-AAC0020 from an uncultured soil metagenomic sample in complex with coenzyme A 分子名称: CHLORIDE ION, COENZYME A, MAGNESIUM ION, ... 著者 Xu, Z, Skarina, T, Stogios, P.J, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2015-12-03 公開日 2015-12-30 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural and Functional Survey of Environmental Aminoglycoside Acetyltransferases Reveals Functionality of Resistance Enzymes. ACS Infect Dis, 3, 2017
7AT2	Crystal structure of inactive EstD11 S144A 分子名称: EstD11 S144A 著者 Miguel-Ruano, V, Rivera, I, Hermoso, J.A. 登録日 2020-10-28 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 Biochemical and Structural Characterization of a novel thermophilic esterase EstD11 provide catalytic insights for the HSL family. Comput Struct Biotechnol J, 19, 2021
5LW5	TURNIP YELLOW MOSAIC VIRUS PROTEASE/DEUBIQUITINASE DOMAIN, DELTAC5 MUTANT 分子名称: RNA replicase polyprotein 著者 Ayach, M, Bressanelli, S. 登録日 2016-09-15 公開日 2017-10-25 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.649 Å) 主引用文献 A mobile loop near the active site acts as a switch between the dual activities of a viral protease/deubiquitinase. PLoS Pathog., 13, 2017
6SKM	Structure of the native full-length HIV-1 capsid protein A92E in helical assembly (-13,12) 分子名称: Gag protein 著者 Ni, T, Gerard, S, Zhao, G, Ning, J, Zhang, P. 登録日 2019-08-16 公開日 2020-08-26 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 Intrinsic curvature of the HIV-1 CA hexamer underlies capsid topology and interaction with cyclophilin A. Nat.Struct.Mol.Biol., 27, 2020
7AT3	Structure of EstD11 in complex with Naproxen and methanol 分子名称: (2R)-2-(6-methoxynaphthalen-2-yl)propanoic acid, EstD11, FORMIC ACID, ... 著者 Miguel-Ruano, V, Rivera, I, Hermoso, J.A. 登録日 2020-10-28 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Biochemical and Structural Characterization of a novel thermophilic esterase EstD11 provide catalytic insights for the HSL family. Comput Struct Biotechnol J, 19, 2021
7ATD	Structure of inactive EstD11 S144A in complex with methyl-naproxen 分子名称: ACETATE ION, EstD11 S144A, FORMIC ACID, ... 著者 Miguel-Ruano, V, Rivera, I, Hermoso, J.A. 登録日 2020-10-29 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Biochemical and Structural Characterization of a novel thermophilic esterase EstD11 provide catalytic insights for the HSL family. Comput Struct Biotechnol J, 19, 2021
4EHH	Allosteric Modulation of Caspase-3 through Mutagenesis 分子名称: ACE-ASP-GLU-VAL-ASP-CHLOROMETHYLKETONE INHIBITOR, Caspase-3 著者 Walters, J, Schipper, J.L, Swartz, P.D, Mattos, C, Clark, A.C. 登録日 2012-04-02 公開日 2012-06-06 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Allosteric modulation of caspase 3 through mutagenesis. Biosci.Rep., 32, 2012
6SLB	Crystal structure of isomerase PaaG with trans-3,4-didehydroadipyl-CoA 分子名称: (~{E})-6-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethylsulfanyl]-6-oxidanylidene-hex-3-enoic acid, Enoyl-CoA hydratase/carnithine racemase 著者 Saleem-Batcha, R, Spieker, M, Teufel, R. 登録日 2019-08-19 公開日 2019-12-11 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Structural and Mechanistic Basis of an Oxepin-CoA Forming Isomerase in Bacterial Primary and Secondary Metabolism. Acs Chem.Biol., 14, 2019
6SLQ	Structure of the native full-length HIV-1 capsid protein A92E in helical assembly (-12,11) 分子名称: Gag protein 著者 Ni, T, Gerard, S, Zhao, G, Ning, J, Zhang, P. 登録日 2019-08-20 公開日 2020-09-09 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Intrinsic curvature of the HIV-1 CA hexamer underlies capsid topology and interaction with cyclophilin A. Nat.Struct.Mol.Biol., 27, 2020
7KS6	STRUCTURE OF TETRASACCHARIDE BUILDING BLOCK OF A SULFATED FUCAN FROM LYTECHINUS VARIEGATUS 分子名称: 4-O-sulfo-alpha-L-fucopyranose-(1-3)-2,4-di-O-sulfo-alpha-L-fucopyranose-(1-3)-2-O-sulfo-alpha-L-fucopyranose-(1-3)-2-O-sulfo-alpha-L-fucopyranose 著者 Kim, S.B, Thara, R, Aderibigbe, A.O, Doerksen, R.J, Pomin, V.H. 登録日 2020-11-21 公開日 2020-12-16 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Conformational properties of l-fucose and the tetrasaccharide building block of the sulfated l-fucan from Lytechinus variegatus. J.Struct.Biol., 209, 2020
6SOX	Crystal structure of cAMP-dependent protein kinase A (CHO PKA) in complex with 4-carbamoylbenzoic acid 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-aminocarbonylbenzoic acid, DIMETHYL SULFOXIDE, ... 著者 Oebbeke, M, Siefker, C, Heine, A, Klebe, G. 登録日 2019-08-30 公開日 2020-09-09 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts. Angew.Chem.Int.Ed.Engl., 60, 2021
5LZB	Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H. 登録日 2016-09-29 公開日 2016-11-23 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (5.3 Å) 主引用文献 The pathway to GTPase activation of elongation factor SelB on the ribosome. Nature, 540, 2016
4XOZ	Crystal structure of ERK2 in complex with an inhibitor 分子名称: Mitogen-activated protein kinase 1, N~1~-[3-(benzyloxy)benzyl]-1H-tetrazole-1,5-diamine, SULFATE ION 著者 Gelin, M, Allemand, F, Labesse, G, Guichou, J.F. 登録日 2015-01-16 公開日 2015-08-12 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Combining `dry' co-crystallization and in situ diffraction to facilitate ligand screening by X-ray crystallography. Acta Crystallogr.,Sect.D, 71, 2015
5EYA	TRIM25 RING domain in complex with Ubc13-Ub conjugate 分子名称: Polyubiquitin-B, Tripartite motif-containing 25 variant, Ubiquitin-conjugating enzyme E2 N, ... 著者 Pornillos, O, Sanchez, J.G. 登録日 2015-11-24 公開日 2016-08-17 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Mechanism of TRIM25 Catalytic Activation in the Antiviral RIG-I Pathway. Cell Rep, 16, 2016
6SA0	Ternary complex of Prim-PolC from Mycobacterium smegmatis with 2nt gapped DNA and UpNHpp 分子名称: 1,2-ETHANEDIOL, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, CACODYLATE ION, ... 著者 Brissett, N.C, Doherty, A.J. 登録日 2019-07-15 公開日 2020-11-18 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.209 Å) 主引用文献 Molecular basis for DNA repair synthesis on short gaps by mycobacterial Primase-Polymerase C. Nat Commun, 11, 2020
4XZ3	Ca. Korarchaeum cryptofilum dinucleotide forming Acetyl-coenzyme A synthetase 1 (Se-Met derivative) in complex with coenzyme A and Mg-AMPPCP, phosphohistidine segment pointing towards nucleotide binding site 分子名称: Acyl-CoA synthetase (NDP forming), COENZYME A, MAGNESIUM ION, ... 著者 Weisse, R.H.-J, Scheidig, A.J. 登録日 2015-02-03 公開日 2016-01-27 最終更新日 2016-02-10 実験手法 X-RAY DIFFRACTION (2.398 Å) 主引用文献 Structure of NDP-forming Acetyl-CoA synthetase ACD1 reveals a large rearrangement for phosphoryl transfer. Proc.Natl.Acad.Sci.USA, 113, 2016
2UUI	Crystal structure of Human Leukotriene C4 Synthase 分子名称: DODECYL-BETA-D-MALTOSIDE, LEUKOTRIENE C4 SYNTHASE, NICKEL (II) ION, ... 著者 Martinez Molina, D, Wetterholm, A, Kohl, A, McCarthy, A.A, Niegowski, D, Ohlson, E, Hammarberg, T, Eshaghi, S, Haeggstrom, J.Z, Nordlund, P. 登録日 2007-03-02 公開日 2007-07-17 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Basis for Synthesis of Inflammatory Mediators by Human Leukotriene C4 Synthase. Nature, 448, 2007
5EXS	AAA+ ATPase FleQ from Pseudomonas aeruginosa bound to ATP-gamma-S 分子名称: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transcriptional regulator FleQ 著者 Navarro, M.V.A.S, Sondermann, H, Matsuyama, B. 登録日 2015-11-24 公開日 2016-01-13 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa. Proc.Natl.Acad.Sci.USA, 113, 2016
4XI8	Crystal Structure of the FIC domain of Bep5 protein (VirB-translocated Bartonella effector protein) from Bartonella clarridgeiae 分子名称: 1,2-ETHANEDIOL, Bartonella effector protein (Bep) substrate of VirB T4SS 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2015-01-06 公開日 2016-01-13 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Evolutionary Diversification of Host-Targeted Bartonella Effectors Proteins Derived from a Conserved FicTA Toxin-Antitoxin Module. Microorganisms, 9, 2021
4Y23	Crystal structure of T399A precursor mutant protein of gamma-glutamyl transpeptidase from Bacillus licheniformis 分子名称: Gamma glutamyl transpeptidase,Gamma-glutamyltranspeptidase, SODIUM ION 著者 Pica, A, Merlino, A. 登録日 2015-02-09 公開日 2015-11-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 The maturation mechanism of gamma-glutamyl transpeptidases: Insights from the crystal structure of a precursor mimic of the enzyme from Bacillus licheniformis and from site-directed mutagenesis studies. Biochim.Biophys.Acta, 1864, 2015
5LSD	recombinant mouse Nerve Growth Factor 分子名称: Beta-nerve growth factor 著者 Paoletti, F, de Chiara, C, Kelly, G, Lamba, D, Cattaneo, A, Pastore, A. 登録日 2016-08-25 公開日 2017-07-05 最終更新日 2024-07-03 実験手法 SOLUTION NMR 主引用文献 Conformational Rigidity within Plasticity Promotes Differential Target Recognition of Nerve Growth Factor. Front Mol Biosci, 3, 2016
7VH9	Solution structure of the chimeric peptide of the first SURP domain of Human SF3A1 and the interacting region of SF1. 分子名称: Splicing factor 3A subunit 1,Splicing factor 1 著者 Muto, Y, Kuwasako, K, Takizawa, M, Kobayashi, N, Sakamoto, T. 登録日 2021-09-21 公開日 2022-09-28 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural basis for the interaction between the first SURP domain of the SF3A1 subunit in U2 snRNP and the human splicing factor SF1. Protein Sci., 31, 2022

<659660661662663664665666667668669670671672673674>