PDB: 35140 件ウェブページステータス検索Chemie searchBIRD

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4X4O	Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix and CTP 分子名称: CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, G70A tRNA minihelix, ... 著者 Kuhn, C.-D, Joshua-Tor, L. 登録日 2014-12-03 公開日 2015-02-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.201 Å) 主引用文献 On-Enzyme Refolding Permits Small RNA and tRNA Surveillance by the CCA-Adding Enzyme. Cell, 160, 2015
4X4S	Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a G70A arginyl-tRNA minihelix ending in CCACC and CTP 分子名称: CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, D(-)-TARTARIC ACID, ... 著者 Kuhn, C.-D, Joshua-Tor, L. 登録日 2014-12-03 公開日 2015-02-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 On-enzyme refolding permits small RNA and tRNA surveillance by the CCA-adding enzyme. Cell, 160, 2015
8PFW	X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(DAniF)(CO3)3] in condition A 分子名称: CHLORIDE ION, K2[Ru2(DAniF)(CO3)3], Lysozyme C, ... 著者 Teran, A, Ferraro, G, Merlino, A. 登録日 2023-06-16 公開日 2023-07-19 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 Charge effect in protein metalation reactions by diruthenium complexes Inorg Chem Front, 2023
8PFX	X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(D-p-FPhF)(CO3)3] in condition B 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 6,8-bis(4-fluorophenyl)-1,5-bis(oxidanyl)-2,4-dioxa-6,8-diaza-1$l^{4},5$l^{4}-diruthenabicyclo[3.3.0]octan-3-one, FORMIC ACID, ... 著者 Teran, A, Ferraro, G, Merlino, A. 登録日 2023-06-16 公開日 2023-07-19 実験手法 X-RAY DIFFRACTION (1.03 Å) 主引用文献 Charge effect in protein metalation reactions by diruthenium complexes Inorg Chem Front, 2023
8PFE	Crystal Structure of an Hexavariant of the b1 Domain of Human Neuropilin-1 in Complex with the KDKPPR Peptide 分子名称: ACETATE ION, LYS-ASP-LYS-PRO-PRO-ARG, Neuropilin-1 著者 Jelsch, C, Favier, F, Didierjean, C. 登録日 2023-06-15 公開日 2023-08-02 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 New Crystal Form of Human Neuropilin-1 b1 Fragment with Six Electrostatic Mutations Complexed with KDKPPR Peptide Ligand. Molecules, 28, 2023
8OWN	CryoEM structure of glutamate dehydrogenase isoform 2 from Arabidopsis thaliana in apo-form 分子名称: CALCIUM ION, Glutamate dehydrogenase 2 著者 Grzechowiak, M, Ruszkowski, M. 登録日 2023-04-28 公開日 2023-08-09 実験手法 ELECTRON MICROSCOPY (3.26 Å) 主引用文献 Structural and functional studies of Arabidopsis thaliana glutamate dehydrogenase isoform 2 demonstrate enzyme dynamics and identify its calcium binding site. Plant Physiol Biochem., 201, 2023
4X8E	Ergothioneine-biosynthetic sulfoxide synthase EgtB in complex with N,N,N-trimethyl-histidine 分子名称: CALCIUM ION, CHLORIDE ION, FE (III) ION, ... 著者 Vit, A, Goncharenko, K.V, Blankenfeldt, W, Seebeck, F.P. 登録日 2014-12-10 公開日 2015-01-28 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure of the Sulfoxide Synthase EgtB from the Ergothioneine Biosynthetic Pathway. Angew.Chem.Int.Ed.Engl., 54, 2015
4LDU	Crystal structure of the DNA binding domain of Arabidopsis thaliana auxin response factor 5 分子名称: Auxin response factor 5, CHLORIDE ION 著者 Boer, D.R, Freire-Rios, A, van den Berg, W.M.A, Weijers, D, Coll, M. 登録日 2013-06-25 公開日 2014-02-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors. Cell(Cambridge,Mass.), 156, 2014
8OWM	Crystal structure of glutamate dehydrogenase 2 from Arabidopsis thaliana binding Ca, NAD and 2,2-dihydroxyglutarate 分子名称: 1,2-ETHANEDIOL, 2,2-bis(oxidanyl)pentanedioic acid, CALCIUM ION, ... 著者 Grzechowiak, M, Ruszkowski, M. 登録日 2023-04-28 公開日 2023-08-09 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural and functional studies of Arabidopsis thaliana glutamate dehydrogenase isoform 2 demonstrate enzyme dynamics and identify its calcium binding site. Plant Physiol Biochem., 201, 2023
8OT5	Crystal structure of the titin domain Fn3-85 分子名称: CHLORIDE ION, SODIUM ION, Titin 著者 Nikoopour, R, Rees, M, Gautel, M. 登録日 2023-04-20 公開日 2023-08-23 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Structure determination and analysis of titin A-band fibronectin type III domains provides insights for disease-linked variants and protein oligomerisation. J.Struct.Biol., 215, 2023
4WQJ	Crystal Structure of CYP119 from Sulfolobus acidocaldarius, Collected at 298K and Complexed with 4-(4-bromophenyl)-1H imidazole 分子名称: 4-(4-bromophenyl)-1H-imidazole, Cytochrome P450 119, GLYCEROL, ... 著者 Madrona, Y. 登録日 2014-10-22 公開日 2015-02-18 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 TWO DIMENSIONAL NMR AND X-RAY ANALYSIS OF CYP119 LIGAND-DEPENDENT CONFORMATIONAL DYNAMICS. To Be Published
8OTY	Crystal structure of the titin domain Fn3-90 分子名称: Titin 著者 Nikoopour, R, Rees, M, Gautel, M. 登録日 2023-04-21 公開日 2023-08-23 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure determination and analysis of titin A-band fibronectin type III domains provides insights for disease-linked variants and protein oligomerisation. J.Struct.Biol., 215, 2023
7NHP	Structure of PSII-I (PSII with Psb27, Psb28, and Psb34) 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE, ... 著者 Zabret, J, Bohn, S, Schuller, S.K, Arnolds, O, Chan, A, Tajkhorshid, E, Stoll, R, Engel, B.D, Rudack, T, Schuller, J.M, Nowaczyk, M.M. 登録日 2021-02-11 公開日 2021-05-05 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.72 Å) 主引用文献 Structural insights into photosystem II assembly. Nat.Plants, 7, 2021
7NHO	Structure of PSII-M 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE, ... 著者 Zabret, J, Bohn, S, Schuller, S.K, Arnolds, O, Chan, A, Tajkhorshid, E, Stoll, R, Engel, B.D, Rudack, T, Schuller, J.M, Nowaczyk, M.M. 登録日 2021-02-11 公開日 2021-05-05 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.66 Å) 主引用文献 Structural insights into photosystem II assembly. Nat.Plants, 7, 2021
4X4U	Crystal structure of the A.fulgidus CCA-adding enzyme in complex with a human MenBeta minihelix ending in CCACC 分子名称: CCA-adding enzyme, DI(HYDROXYETHYL)ETHER, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ... 著者 Kuhn, C.-D, Joshua-Tor, L. 登録日 2014-12-03 公開日 2015-02-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 On-Enzyme Refolding Permits Small RNA and tRNA Surveillance by the CCA-Adding Enzyme. Cell, 160, 2015
8P7N	The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes 分子名称: FORMIC ACID, Parathion hydrolase, ZINC ION 著者 Dym, O, Aggarwal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L. 登録日 2023-05-30 公開日 2023-10-25 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase. Acta Crystallogr D Struct Biol, 79, 2023
8P7V	The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes 分子名称: 1,2-ETHANEDIOL, 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, ... 著者 Dym, O, Aggawal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L. 登録日 2023-05-31 公開日 2023-10-25 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.737 Å) 主引用文献 The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase. Acta Crystallogr D Struct Biol, 79, 2023
8OYP	Crystal structure of Ubiquitin specific protease 11 (USP11) in complex with a substrate mimetic 分子名称: CADMIUM ION, CHLORIDE ION, GLYCEROL, ... 著者 Maurer, S.K, Caulton, S.G, Ward, S.J, Emsley, J, Dreveny, I. 登録日 2023-05-05 公開日 2023-10-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Ubiquitin-specific protease 11 structure in complex with an engineered substrate mimetic reveals a molecular feature for deubiquitination selectivity. J.Biol.Chem., 299, 2023
8P7Q	The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes 分子名称: 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, GLYCEROL, ... 著者 Dym, O, Aggarwal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L. 登録日 2023-05-30 公開日 2023-10-25 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase. Acta Crystallogr D Struct Biol, 79, 2023
8P7R	The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes 分子名称: 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, GLYCEROL, ... 著者 Dym, O, Aggarwal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L. 登録日 2023-05-30 公開日 2023-10-25 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase. Acta Crystallogr D Struct Biol, 79, 2023
4LDW	Crystal structure of the DNA Binding Domain of arabidopsis thaliana auxin response factor 1, P21 structure 分子名称: Auxin response factor 1, CHLORIDE ION 著者 boer, D.R, Coll, M. 登録日 2013-06-25 公開日 2014-02-12 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.67 Å) 主引用文献 Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors. Cell(Cambridge,Mass.), 156, 2014
8U4U	Crystal structure of 53BP1 tandem Tudor domain homodimer engineered with two disulfide bridges 分子名称: TP53-binding protein 1 著者 Cui, G, Botuyan, M.V, Thompson, J.R, Mer, G. 登録日 2023-09-11 公開日 2023-09-20 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.79 Å) 主引用文献 An autoinhibited state of 53BP1 revealed by small molecule antagonists and protein engineering. Nat Commun, 14, 2023
8P1A	Lysozyme structure solved from serial crystallography data collected at 2 kHz for 5 seconds with JUNGFRAU detector at MAXIV 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C 著者 Nan, J, Leonarski, F, Furrer, A, Dworkowski, F. 登録日 2023-05-11 公開日 2023-10-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Kilohertz serial crystallography with the JUNGFRAU detector at a fourth-generation synchrotron source. Iucrj, 10, 2023
8P1D	Lysozyme structure solved from serial crystallography data collected at 100 Hz with JUNGFRAU detector at MAXIV 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ... 著者 Nan, J, Leonarski, F, Furrer, A, Dworkowski, F. 登録日 2023-05-11 公開日 2023-10-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Kilohertz serial crystallography with the JUNGFRAU detector at a fourth-generation synchrotron source. Iucrj, 10, 2023
8P7S	The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes 分子名称: 1,2-ETHANEDIOL, 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, ... 著者 Dym, O, Aggarwal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L. 登録日 2023-05-31 公開日 2023-10-25 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase. Acta Crystallogr D Struct Biol, 79, 2023

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