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8J5D
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Cryo-EM structure of starch degradation complex of BAM1-LSF1-MDH
分子名称: Beta-amylase 1, chloroplastic, Malate dehydrogenase, ...
著者Guan, Z.Y, Liu, J, Yan, J.J.
登録日2023-04-21
公開日2024-01-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The LIKE SEX FOUR 1-malate dehydrogenase complex functions as a scaffold to recruit beta-amylase to promote starch degradation.
Plant Cell, 36, 2023
7JYZ
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Solution NMR structure and dynamics of human Brd3 ET in complex with MLV IN CTD
分子名称: Bromodomain-containing protein 3, Integrase
著者Aiyer, S, Liu, G, Swapna, G.V.T, Hao, J, Ma, L.C, Roth, M.J, Montelione, G.T.
登録日2020-09-01
公開日2021-06-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A common binding motif in the ET domain of BRD3 forms polymorphic structural interfaces with host and viral proteins.
Structure, 29, 2021
6JQL
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BU of 6jql by Molmil
Structure of PaaZ, a bifunctional enzyme
分子名称: Bifunctional protein PaaZ
著者Gakher, L, Vinothkumar, K.R, Katagihallimath, N, Sowdhamini, R, Sathyanarayanan, N, Cannone, G.
登録日2019-03-31
公開日2019-09-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway.
Nat Commun, 10, 2019
6JQO
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Structure of PaaZ, a bifunctional enzyme in complex with NADP+ and CCoA
分子名称: Bifunctional protein PaaZ, CROTONYL COENZYME A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Gakher, L, Vinothkumar, K.R, Katagihallimath, N, Sowdhamini, R, Sathyanarayanan, N, Cannone, G.
登録日2019-03-31
公開日2019-09-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway.
Nat Commun, 10, 2019
8J56
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Crystal structure of the FlhDC complex from Cupriavidus necator
分子名称: Flagellar transcriptional regulator FlhC, Flagellar transcriptional regulator FlhD, ZINC ION
著者Cho, S.Y, Oh, H.B, Yoon, S.I.
登録日2023-04-21
公開日2024-02-28
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Hexameric structure of the flagellar master regulator FlhDC from Cupriavidus necator and its interaction with flagellar promoter DNA.
Biochem.Biophys.Res.Commun., 672, 2023
8JNE
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BU of 8jne by Molmil
The cryo-EM structure of the decameric RAD51 ring bound to the nucleosome without the linker DNA binding
分子名称: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
著者Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2023-06-06
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.68 Å)
主引用文献Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8JNF
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The cryo-EM structure of the RAD51 filament bound to the nucleosome
分子名称: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
著者Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2023-06-06
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (6.91 Å)
主引用文献Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8JC5
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Crystal structure of PLEKHM1 RUN domain in complex with GTP-bound Arl8b(Q75L)
分子名称: ADP-ribosylation factor-like protein 8B, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Qiu, X.H, Pan, L.F.
登録日2023-05-10
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Mechanistic Insights into the Interactions of Arl8b with the RUN Domains of PLEKHM1 and SKIP.
J.Mol.Biol., 435, 2023
8IUW
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Crystal structure of Copper-bound N(omega)-hydroxy-L-arginine hydrolase with oxidized Cys86
分子名称: COPPER (I) ION, COPPER (II) ION, MAGNESIUM ION, ...
著者Oda, K, Matoba, Y.
登録日2023-03-25
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Copper inactivates DcsB by oxidation of the Cys86 to cysteine sulfinic aicd
To Be Published
8JND
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BU of 8jnd by Molmil
The cryo-EM structure of the nonameric RAD51 ring bound to the nucleosome with the linker DNA binding
分子名称: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
著者Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2023-06-06
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.66 Å)
主引用文献Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8J9F
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BU of 8j9f by Molmil
Structure of STG-hydrolyzing beta-glucosidase 1 (PSTG1)
分子名称: Beta-glucosidase, GLYCEROL
著者Yanai, T, Imaizumi, R, Takahashi, Y, Katsumura, E, Yamamoto, M, Nakayama, T, Yamashita, S, Takeshita, K, Sakai, N, Matsuura, H.
登録日2023-05-03
公開日2024-04-10
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural insights into a bacterial beta-glucosidase that is capable of degrading sesaminol triglucoside to produce sesaminol
To be published
8JSC
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BU of 8jsc by Molmil
Structure of the FSP1 protein from Human
分子名称: 6-HYDROXY-FLAVIN-ADENINE DINUCLEOTIDE, Ferroptosis suppressor protein 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Zhang, S.T, Jia, D.
登録日2023-06-19
公開日2024-03-13
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献FSP1 oxidizes NADPH to suppress ferroptosis.
Cell Res., 33, 2023
8IWF
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Aspergillus niger Rha-2 and pNPR
分子名称: (2S,3R,4R,5R,6S)-2-methyl-6-[4-[oxidanyl(oxidanylidene)-$l^4-azanyl]phenoxy]oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Li, L.J, Li, L, Wang, M.H, Jiang, Z.D, Zhu, Y.B, Jin, T.C, Ni, H.
登録日2023-03-29
公開日2024-04-03
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Crystal structure and catalytic function of alpha-L-rhamnosidase from Aspergillus niger
To Be Published
8IWD
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Aspergillus niger Rha-2
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Li, L.J, Li, L, Wang, M.H, Jiang, Z.D, Zhu, Y.B, Jin, T.C, Ni, H.
登録日2023-03-29
公開日2024-04-03
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Crystal structure and catalytic function of alpha-L-rhamnosidase from Aspergillus niger
To Be Published
8J0N
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BU of 8j0n by Molmil
cryo-EM structure of human EMC
分子名称: ER membrane protein complex subunit 1, ER membrane protein complex subunit 10, ER membrane protein complex subunit 2, ...
著者Li, M, Zhang, C, Wu, J, Lei, M.
登録日2023-04-11
公開日2024-04-03
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structural insights into human EMC and its interaction with VDAC.
Aging (Albany NY), 16, 2024
8J0O
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BU of 8j0o by Molmil
cryo-EM structure of human EMC and VDAC
分子名称: ER membrane protein complex subunit 1, ER membrane protein complex subunit 10, ER membrane protein complex subunit 2, ...
著者Li, M, Zhang, C, Wu, J, Lei, M.
登録日2023-04-11
公開日2024-04-03
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Structural insights into human EMC and its interaction with VDAC.
Aging (Albany NY), 16, 2024
3C3U
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BU of 3c3u by Molmil
Crystal structure of AKR1C1 in complex with NADP and 3,5-dichlorosalicylic acid
分子名称: 3,5-dichloro-2-hydroxybenzoic acid, Aldo-keto reductase family 1 member C1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Dhagat, U, El-Kabbani, O.
登録日2008-01-28
公開日2008-08-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Selectivity determinants of inhibitor binding to human 20alpha-hydroxysteroid dehydrogenase: crystal structure of the enzyme in ternary complex with coenzyme and the potent inhibitor 3,5-dichlorosalicylic acid
J.Med.Chem., 51, 2008
8JHH
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BU of 8jhh by Molmil
Glycoside hydrolase family 55 endo-beta-1,3-glucanase from Microdochium nivale
分子名称: GLYCEROL, MnLam55A
著者Ota, T, Saburi, W, Yamashita, K, Tagami, T, Yu, J, Komba, S, Jewell, L.E, Hsiang, T, Imai, R, Yao, M, Mori, H.
登録日2023-05-23
公開日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular mechanism for endo-type action of glycoside hydrolase family 55 endo-beta-1,3-glucanase on beta 1-3/1-6-glucan.
J.Biol.Chem., 299, 2023
6JQM
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BU of 6jqm by Molmil
Structure of PaaZ with NADPH
分子名称: Bifunctional protein PaaZ, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Gakher, L, Vinothkumar, K.R, Katagihallimath, N, Sowdhamini, R, Sathyanarayanan, N, Cannone, G.
登録日2019-03-31
公開日2019-09-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway.
Nat Commun, 10, 2019
7KRG
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BU of 7krg by Molmil
Crystal Structure of Mannitol Dehydrogenase (ChMDH) from Cladosporium herbarum in complex with NADP+ and Na
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-dependent mannitol dehydrogenase, SODIUM ION
著者Lee, S.G, Jez, J.M.
登録日2020-11-19
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.03797364 Å)
主引用文献Biochemical and clinical studies of putative allergens to assess what distinguishes them from other non-allergenic proteins in the same family.
Transgenic Res, 31, 2022
6IM7
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BU of 6im7 by Molmil
CueO-12.1 multicopper oxidase
分子名称: Blue copper oxidase CueO,12.1 peptide,Blue copper oxidase CueO, CALCIUM ION
著者Wongsantichon, J, Robinson, R, Ghadessy, F.
登録日2018-10-22
公開日2019-03-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Development and structural characterization of an engineered multi-copper oxidase reporter of protein-protein interactions.
J.Biol.Chem., 294, 2019
7LZM
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BU of 7lzm by Molmil
COMPARISON OF THE CRYSTAL STRUCTURE OF BACTERIOPHAGE T4 LYSOZYME AT LOW, MEDIUM, AND HIGH IONIC STRENGTHS
分子名称: CHLORIDE ION, T4 LYSOZYME
著者Bell, J.A, Wilson, K, Zhang, X.-J, Faber, H.R, Nicholson, H, Matthews, B.W.
登録日1991-01-25
公開日1992-07-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Comparison of the crystal structure of bacteriophage T4 lysozyme at low, medium, and high ionic strengths.
Proteins, 10, 1991
7LYZ
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PROTEIN MODEL BUILDING BY THE USE OF A CONSTRAINED-RESTRAINED LEAST-SQUARES PROCEDURE
分子名称: HEN EGG WHITE LYSOZYME
著者Moult, J, Yonath, A, Sussman, J, Herzberg, O, Podjarny, A, Traub, W.
登録日1977-05-06
公開日1977-06-20
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Protein Model Building by the Use of a Constrained-Restrained Least-Squares Procedure
J.Appl.Crystallogr., 16, 1983
8KA5
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BU of 8ka5 by Molmil
Arabidopsis AP endonuclease ARP complex with 20bp THF-containing DNA
分子名称: 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE, DNA (43-MER), DNA-(apurinic or apyrimidinic site) endonuclease, ...
著者Guo, W.T, Wu, B.X.
登録日2023-08-02
公開日2024-02-21
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the catalytic mechanism of the AP endonuclease AtARP.
Structure, 32, 2024
7KWM
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BU of 7kwm by Molmil
CtBP1 (28-375) L182F/V185T - AMP
分子名称: ADENOSINE MONOPHOSPHATE, C-terminal-binding protein 1, CALCIUM ION
著者Royer, W.E, Del Campo, M.
登録日2020-12-01
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献NAD(H) phosphates mediate tetramer assembly of human C-terminal binding protein (CtBP).
J.Biol.Chem., 296, 2021

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件を2024-07-10に公開中

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