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7RPP
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Crystal structure of human CEACAM1 with GFCC' and ABED face
分子名称: 1,2-ETHANEDIOL, Carcinoembryonic antigen-related cell adhesion molecule 1
著者Gandhi, A.K, Kim, W.M, Sun, Z.-Y, Huang, Y.H, Petsko, G.A, Blumberg, R.S.
登録日2021-08-04
公開日2022-08-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analysis of human CEACAM1 oligomerization.
Commun Biol, 5, 2022
5DKA
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BU of 5dka by Molmil
A C2HC zinc finger is essential for the activity of the RING ubiquitin ligase RNF125
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase RNF125, MAGNESIUM ION, ...
著者Boer, D.R, Coll, M, Bijlmakers, M.J.
登録日2015-09-03
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A C2HC zinc finger is essential for the RING-E2 interaction of the ubiquitin ligase RNF125.
Sci Rep, 6, 2016
7XC3
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BU of 7xc3 by Molmil
Crystal structure of SARS-CoV-2 NSP3 Macrodomain 3 (SARS-unique domain-M)
分子名称: Papain-like protease nsp3
著者Li, J, Gao, J.
登録日2022-03-22
公開日2022-11-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Two Binding Sites of SARS-CoV-2 Macrodomain 3 Probed by Oxaprozin and Meclomen.
J.Med.Chem., 65, 2022
7XC4
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Crystal structure of SARS-CoV-2 NSP3 Macrodomain 3 (SARS-unique domain-M) in complex with Oxaprozin
分子名称: 3-(4,5-diphenyl-1,3-oxazol-2-yl)propanoic acid, Papain-like protease nsp3
著者Li, J, Liu, Y, Gao, J, Ruan, K.
登録日2022-03-22
公開日2022-11-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Two Binding Sites of SARS-CoV-2 Macrodomain 3 Probed by Oxaprozin and Meclomen.
J.Med.Chem., 65, 2022
5E4X
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BU of 5e4x by Molmil
Crystal structure of cpSRP43 chromodomain 3
分子名称: MAGNESIUM ION, Signal recognition particle 43 kDa protein, chloroplastic
著者Horn, A, Ahmed, Y.L, Wild, K, Sinning, I.
登録日2015-10-07
公開日2015-12-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural basis for cpSRP43 chromodomain selectivity and dynamics in Alb3 insertase interaction.
Nat Commun, 6, 2015
5E6A
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BU of 5e6a by Molmil
Glucocorticoid receptor DNA binding domain - PLAU NF-kB response element complex
分子名称: DNA (5'-D(*AP*TP*CP*AP*GP*GP*AP*AP*AP*TP*TP*CP*CP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*GP*GP*AP*AP*TP*TP*TP*CP*CP*TP*GP*AP*T)-3'), Glucocorticoid receptor, ...
著者Hudson, W.H, Rye, E.A, Herbst, A.G, Ortlund, E.A.
登録日2015-10-09
公開日2017-02-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.197 Å)
主引用文献Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements.
Nat Commun, 9, 2018
5DU1
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BU of 5du1 by Molmil
Crystal structure of Dendroaspis polylepis mambalgin-1 wild-type in P21 space group.
分子名称: Mambalgin-1
著者Stura, E.A, Tepshi, L, Mourier, G, Kessler, P, Servent, D.
登録日2015-09-18
公開日2015-12-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mambalgin-1 Pain-relieving Peptide, Stepwise Solid-phase Synthesis, Crystal Structure, and Functional Domain for Acid-sensing Ion Channel 1a Inhibition.
J.Biol.Chem., 291, 2016
4ZU4
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BU of 4zu4 by Molmil
X-ray structure of the 3,4-ketoisomerase domain of FdtD from Shewanella denitrificans
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, PHOSPHATE ION, ...
著者Thoden, J.B, Vinogradov, E, Gilbert, M, Salinger, A.J, Holden, H.M.
登録日2015-05-15
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Bacterial Sugar 3,4-Ketoisomerases: Structural Insight into Product Stereochemistry.
Biochemistry, 54, 2015
5A21
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BU of 5a21 by Molmil
Structure of bacteriophage SPP1 head-to-tail interface without DNA and tape measure protein
分子名称: 15 PROTEIN, HEAD COMPLETION PROTEIN GP16, MAJOR TAIL PROTEIN 17.1, ...
著者Chaban, Y, Lurz, R, Brasiles, S, Cornilleau, C, Karreman, M, Zinn-Justin, S, Tavares, P, Orlova, E.V.
登録日2015-05-06
公開日2015-06-03
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Structural Rearrangements in the Phage Head-to-Tail Interface During Assembly and Infection.
Proc.Natl.Acad.Sci.USA, 112, 2015
7WU8
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BU of 7wu8 by Molmil
Crystal structure of Harmonin-homology domain 2 (HHD2) of human RTEL1
分子名称: Regulator of telomere elongation helicase 1
著者Kumar, N, Rothweiler, U, Singh, M.
登録日2022-02-07
公開日2023-08-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Harmonin homology domain-mediated interaction of RTEL1 helicase with RPA and DNA provides insights into its recruitment to DNA repair sites.
Nucleic Acids Res., 52, 2024
7X7G
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BU of 7x7g by Molmil
Crystal structure of a dimeric interlocked parallel G-quadruplex
分子名称: DNA (5'-D(*GP*GP*GP*GP*TP*GP*GP*GP*AP*GP*GP*TP*GP*GP*GP*T)-3'), POTASSIUM ION
著者Ngo, K.H, Liew, C.W, Lattmann, S, Winnerdy, F.R, Phan, A.T.
登録日2022-03-09
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Crystal structures of an HIV-1 integrase aptamer: Formation of a water-mediated A.G.G.G.G pentad in an interlocked G-quadruplex.
Biochem.Biophys.Res.Commun., 613, 2022
7XDH
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BU of 7xdh by Molmil
Crystal structure of a dimeric interlocked parallel G-quadruplex
分子名称: DNA (5'-D(*GP*GP*GP*GP*TP*GP*GP*GP*AP*GP*GP*AP*GP*GP*GP*T)-3'), POTASSIUM ION
著者Ngo, K.H, Liew, C.W, Lattmann, S, Winnerdy, F.R, Phan, A.T.
登録日2022-03-27
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Crystal structures of an HIV-1 integrase aptamer: Formation of a water-mediated A.G.G.G.G pentad in an interlocked G-quadruplex.
Biochem.Biophys.Res.Commun., 613, 2022
5AZW
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BU of 5azw by Molmil
Crystal structure of p24beta1 GOLD domain
分子名称: 1,2-ETHANEDIOL, Transmembrane emp24 domain-containing protein 2
著者Nagae, M, Yamaguchi, Y.
登録日2015-10-23
公開日2016-09-14
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献3D Structure and Interaction of p24 beta and p24 delta Golgi Dynamics Domains: Implication for p24 Complex Formation and Cargo Transport
J.Mol.Biol., 428, 2016
5AZY
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BU of 5azy by Molmil
Crystal structure of p24delta1 GOLD domain (Native 2)
分子名称: 1,2-ETHANEDIOL, SULFATE ION, Transmembrane emp24 domain-containing protein 10
著者Nagae, M, Yamaguchi, Y.
登録日2015-10-23
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献3D Structure and Interaction of p24 beta and p24 delta Golgi Dynamics Domains: Implication for p24 Complex Formation and Cargo Transport
J.Mol.Biol., 428, 2016
5BNB
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BU of 5bnb by Molmil
Crystal structure of a Ube2S-ubiquitin conjugate
分子名称: Polyubiquitin-B, Ubiquitin-conjugating enzyme E2 S
著者Lorenz, S.G, Feiler, C.G, Kuriyan, J.
登録日2015-05-25
公開日2016-02-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Crystal Structure of a Ube2S-Ubiquitin Conjugate.
Plos One, 11, 2016
5B1N
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BU of 5b1n by Molmil
DHp domain structure of EnvZ from Escherichia coli
分子名称: Osmolarity sensor protein EnvZ
著者Okajima, T, Eguchi, Y, Tochio, N, Inukai, Y, Shimizu, R, Ueda, S, Shinya, S, Kigawa, T, Fukamizo, T, Igarashi, M, Utsumi, R.
登録日2015-12-09
公開日2016-12-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Angucycline antibiotic waldiomycin recognizes common structural motif conserved in bacterial histidine kinases
J. Antibiot., 70, 2017
5AVA
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BU of 5ava by Molmil
Crystal structure of PHA-E lectin in complex with bisected glycan
分子名称: CALCIUM ION, Erythroagglutinin, MANGANESE (II) ION, ...
著者Nagae, M, Yamaguchi, Y.
登録日2015-06-12
公開日2016-04-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Atomic visualization of a flipped-back conformation of bisected glycans bound to specific lectins
Sci Rep, 6, 2016
5B6J
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BU of 5b6j by Molmil
Crystal structure of Peptidyl-tRNA hydrolase mutant -H24N from Vibrio cholerae
分子名称: Peptidyl-tRNA hydrolase
著者Shahid, S, Kabra, A, Pal, R.K, Arora, A.
登録日2016-05-30
公開日2017-04-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase.
RNA, 23, 2017
5AZX
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BU of 5azx by Molmil
Crystal structure of p24delta1 GOLD domain (native 1)
分子名称: SULFATE ION, Transmembrane emp24 domain-containing protein 10
著者Nagae, M, Yamaguchi, Y.
登録日2015-10-23
公開日2016-09-14
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献3D Structure and Interaction of p24 beta and p24 delta Golgi Dynamics Domains: Implication for p24 Complex Formation and Cargo Transport
J.Mol.Biol., 428, 2016
5B56
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BU of 5b56 by Molmil
Crystal structure of HIV-1 VPR C-Terminal domain and DIBB-M-Importin-Alpha2 complex
分子名称: Importin subunit alpha-1, Protein Vpr
著者Miyatake, H, Sanjoh, A, Matusda, G, Murakami, T, Murakami, H, Hagiwara, K, Yokoyama, M, Sato, H, Miyamoto, Y, Dohmae, N, Aida, Y.
登録日2016-04-25
公開日2016-06-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular Mechanism of HIV-1 Vpr for Binding to Importin-alpha
J.Mol.Biol., 428, 2016
5E6C
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BU of 5e6c by Molmil
Glucocorticoid receptor DNA binding domain - CCL2 NF-kB response element complex
分子名称: DNA (5'-D(*AP*GP*TP*GP*GP*AP*AP*AP*TP*TP*CP*CP*CP*AP*CP*T)-3'), DNA (5'-D(*AP*GP*TP*GP*GP*GP*AP*AP*TP*TP*TP*CP*CP*AP*CP*T)-3'), Glucocorticoid receptor, ...
著者Hudson, W.H, Rye, E.A, Herbst, A.G, Ortlund, E.A.
登録日2015-10-09
公開日2017-02-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements.
Nat Commun, 9, 2018
5DZ5
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BU of 5dz5 by Molmil
Crystal structure of Dendroaspis polylepis mambalgin-1 wild-type in P41212 space group
分子名称: Mambalgin-1
著者Stura, E.A, Tepshi, L, Mourier, G, Kessler, P, Servent, D.
登録日2015-09-25
公開日2015-12-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mambalgin-1 Pain-relieving Peptide, Stepwise Solid-phase Synthesis, Crystal Structure, and Functional Domain for Acid-sensing Ion Channel 1a Inhibition.
J.Biol.Chem., 291, 2016
5E69
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BU of 5e69 by Molmil
Glucocorticoid receptor DNA binding domain - IL8 NF-kB response element complex
分子名称: DNA (5'-D(*AP*TP*CP*GP*TP*GP*GP*AP*AP*TP*TP*TP*CP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*GP*AP*AP*AP*TP*TP*CP*CP*AP*CP*GP*AP*T)-3'), Glucocorticoid receptor, ...
著者Hudson, W.H, Rye, E.A, Herbst, A.G, Ortlund, E.A.
登録日2015-10-09
公開日2017-02-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements.
Nat Commun, 9, 2018
5E6D
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BU of 5e6d by Molmil
Glucocorticoid receptor DNA binding domain - ICAM1 NF-kB response element complex
分子名称: DNA (5'-D(*GP*CP*TP*CP*CP*GP*GP*AP*AP*TP*TP*TP*CP*CP*AP*A)-3'), DNA (5'-D(*TP*TP*GP*GP*AP*AP*AP*TP*TP*CP*CP*GP*GP*AP*GP*C)-3'), Glucocorticoid receptor, ...
著者Hudson, W.H, Rye, E.A, Herbst, A.G, Ortlund, E.A.
登録日2015-10-09
公開日2017-02-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements.
Nat Commun, 9, 2018
8HW9
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BU of 8hw9 by Molmil
Solution structure of ubiquitin-like domain (UBL) of human ZFAND1
分子名称: AN1-type zinc finger protein 1
著者Lai, C.H, Ko, K.T, Fan, P.J, Yu, T.A, Chang, C.F, Hsu, S.T.D.
登録日2022-12-29
公開日2024-01-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of ubiquitin-like domain (UBL) of human ZFAND1
To Be Published

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件を2024-07-17に公開中

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