PDB: 9904 件ウェブページステータス検索Chemie searchBIRD

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1Y18	Fab fragment of catalytic elimination antibody 34E4 E(H50)D mutant in complex with hapten 分子名称: 2-AMINO-5,6-DIMETHYL-BENZIMIDAZOLE-1-PENTANOIC ACID, CHLORIDE ION, Catalytic antibody 34E4 heavy chain, ... 著者 Debler, E.W, Ito, S, Heine, A, Wilson, I.A. 登録日 2004-11-17 公開日 2005-04-05 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural origins of efficient proton abstraction from carbon by a catalytic antibody Proc.Natl.Acad.Sci.USA, 102, 2005
1Y0L	Catalytic elimination antibody 34E4 in complex with hapten 分子名称: 2-AMINO-5,6-DIMETHYL-BENZIMIDAZOLE-1-PENTANOIC ACID, CHLORIDE ION, Catalytic Antibody Fab 34E4 Heavy chain, ... 著者 Debler, E.W, Ito, S, Heine, A, Wilson, I.A. 登録日 2004-11-15 公開日 2005-04-05 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural origins of efficient proton abstraction from carbon by a catalytic antibody Proc.Natl.Acad.Sci.USA, 102, 2005
2I9L	Structure of Fab 7D11 from a neutralizing antibody against the poxvirus L1 protein 分子名称: Antibody 7D11 heavy chain, Antibody 7D11 light chain, GLYCEROL, ... 著者 Su, H.P, Golden, J.W, Gittis, A.G, Moss, B, Hooper, J.W, Garboczi, D.N. 登録日 2006-09-05 公開日 2007-09-18 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural basis for the binding of the neutralizing antibody, 7D11, to the poxvirus L1 protein Virology, 368, 2007
8DGX	Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC68.109 isolated from a vaccinated COVID-19 convalescent 分子名称: Antibody CC68.109 Fab heavy chain, Antibody CC68.109 Fab light chain, Spike protein S2' 著者 Liu, H, Wilson, I.A. 登録日 2022-06-24 公開日 2023-01-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 Broadly neutralizing anti-S2 antibodies protect against all three human betacoronaviruses that cause deadly disease. Immunity, 56, 2023
8DGU	Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC25.106 isolated from a vaccinated COVID-19 convalescent 分子名称: Antibody CC25.106 Fab heavy chain, Antibody CC25.106 Fab light chain, GLYCEROL, ... 著者 Liu, H, Wilson, I.A. 登録日 2022-06-24 公開日 2023-01-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Broadly neutralizing anti-S2 antibodies protect against all three human betacoronaviruses that cause deadly disease. Immunity, 56, 2023
8DGV	Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC99.103 isolated from a vaccinated COVID-19 convalescent 分子名称: Antibody CC99.103 Fab heavy chain, Antibody CC99.103 Fab light chain, Spike protein S2' 著者 Liu, H, Wilson, I.A. 登録日 2022-06-24 公開日 2023-01-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Broadly neutralizing anti-S2 antibodies protect against all three human betacoronaviruses that cause deadly disease. Immunity, 56, 2023
8DGW	Crystal structure of HCoV-HKU1 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC95.108 isolated from a vaccinated COVID-19 convalescent 分子名称: Antibody CC95.108 Fab heavy chain, Antibody CC95.108 Fab light chain, Spike protein S2' 著者 Liu, H, Wilson, I.A. 登録日 2022-06-24 公開日 2023-01-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Broadly neutralizing anti-S2 antibodies protect against all three human betacoronaviruses that cause deadly disease. Immunity, 56, 2023
1UWE	MOLECULAR MECHANISM OF ENANTIOSELECTIVE PROTON TRANSFER TO CARBON IN CATALYTIC ANTIBODY 14D9 分子名称: ANTIBODY 14D9 著者 Baumann, U, Reymond, J.L. 登録日 2004-02-05 公開日 2004-02-27 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.67 Å) 主引用文献 Molecular Mechanism of Enantioselective Proton Transfer to Carbon in Catalytic Antibody 14D9 Proc.Natl.Acad.Sci.USA, 101, 2004
1MQK	Crystal structure of the unliganded Fv-fragment of the anti-cytochrome C oxidase antibody 7E2 分子名称: antibody 7E2 FV fragment, heavy chain, light chain 著者 Essen, L.-O, Harrenga, A, Ostermeier, C, Michel, H. 登録日 2002-09-16 公開日 2003-04-01 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (1.28 Å) 主引用文献 1.3 A X-ray structure of an antibody Fv fragment used for induced membrane-protein crystallization. Acta Crystallogr.,Sect.D, 59, 2003
5N7W	Computationally designed functional antibody 分子名称: Antibody Fragment Heavy Chain, Antibody Fragment Light Chain, Interleukin-17A 著者 Hargreaves, D, Breed, J. 登録日 2017-02-21 公開日 2018-11-14 最終更新日 2018-12-05 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Computational Design of Epitope-Specific Functional Antibodies. Cell Rep, 25, 2018
3T2N	Human hepsin protease in complex with the Fab fragment of an inhibitory antibody 分子名称: Antibody, Fab fragment, Heavy Chain, ... 著者 Koschubs, T, Dengl, S, Duerr, H, Kaluza, K, Georges, G, Hartl, C, Jennewein, S, Lanzendoerfer, M, Auer, J, Stern, A, Huang, K.-S, Kostrewa, D, Ries, S, Hansen, S, Kohnert, U, Cramer, P, Mundigl, O. 登録日 2011-07-22 公開日 2011-12-28 最終更新日 2012-07-25 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Allosteric antibody inhibition of human hepsin protease. Biochem.J., 442, 2012
2BMK	Fab fragment of PLP-dependent catalytic antibody 15A9 in complex with phosphopyridoxyl-D-alanine 分子名称: FAB FRAGMENT OF CATALYTIC ANTIBODY 15A9, HEAVY CHAIN, LIGHT CHAIN, ... 著者 Golinelli-Pimpaneau, B, Christen, P. 登録日 2005-03-14 公開日 2006-03-03 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for D-amino acid transamination by the pyridoxal 5'-phosphate-dependent catalytic antibody 15A9. J. Biol. Chem., 281, 2006
2P46	Complex of a camelid single-domain vhh antibody fragment with RNASE A at 2.5A resolution: se5b-ortho-2 crystal form with five se-met sites (L4M, M34, M51, F68M, M83) in vhh scaffold. 分子名称: ANTIBODY CAB-RN05, Ribonuclease pancreatic, ZINC ION 著者 Tereshko, V, Uysal, S, Koide, A, Margalef, K, Koide, S, Kossiakoff, A.A. 登録日 2007-03-11 公開日 2008-03-11 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Toward chaperone-assisted crystallography: protein engineering enhancement of crystal packing and X-ray phasing capabilities of a camelid single-domain antibody (VHH) scaffold Protein Sci., 17, 2008
6IDG	antibody 64M-5 Fab in complex with dT(6-4)T 分子名称: Anti-(6-4) photoproduct antibody 64M-5 Fab (heavy chain), Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain), DNA (5'-D(*(64T)P*(5PY))-3') 著者 Yokoyama, H, Mizutani, R, Noguchi, S, Hayashida, N. 登録日 2018-09-10 公開日 2019-02-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of the antibody 64M-5 Fab and its complex with dT(6-4)T indicate induced-fit and high-affinity mechanisms. Acta Crystallogr.,Sect.F, 75, 2019
6IDH	Antibody 64M-5 Fab in ligand-free form 分子名称: Anti-(6-4) photoproduct antibody 64M-5 Fab (heavy chain), Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain) 著者 Yokoyama, H, Mizutani, R, Noguchi, S, Hayashida, N. 登録日 2018-09-10 公開日 2019-02-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structures of the antibody 64M-5 Fab and its complex with dT(6-4)T indicate induced-fit and high-affinity mechanisms. Acta Crystallogr.,Sect.F, 75, 2019
8KAD	Crystal structure of an antibody light chain tetramer with 3D domain swapping 分子名称: Antibody light chain 著者 Sakai, T, Mashima, T, Kobayashi, N, Ogata, H, Uda, T, Hifumi, E, Hirota, S. 登録日 2023-08-02 公開日 2023-12-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and thermodynamic insights into antibody light chain tetramer formation through 3D domain swapping. Nat Commun, 14, 2023
5KAQ	Crystal structure of broadly neutralizing Influenza A antibody 31.a.83 in complex with Hemagglutinin Hong Kong 1968. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 31.A.83 FAB HEAVY CHAIN, ANTIBODY 31.A.83 FAB LIGHT CHAIN, ... 著者 Joyce, M.G, Thomas, P.V, Wheatley, A.K, McDermott, A.B, Mascola, J.R, Kwong, P.D. 登録日 2016-06-01 公開日 2017-02-22 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.514 Å) 主引用文献 Vaccine-Induced Antibodies that Neutralize Group 1 and Group 2 Influenza A Viruses. Cell, 166, 2016
6KDI	Antibody 64M-5 Fab including isoAsp in complex with dT(6-4)T 分子名称: Anti-(6-4) photoproduct antibody 64M-5 Fab (heavy chain), Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain), DNA (5'-D(*(64T)P*(5PY))-3') 著者 Yokoyama, H, Mizutani, R, Noguchi, S, Hayashida, N. 登録日 2019-07-02 公開日 2019-12-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural and biochemical basis of the formation of isoaspartate in the complementarity-determining region of antibody 64M-5 Fab. Sci Rep, 9, 2019
6KDH	Antibody 64M-5 Fab including isoAsp in ligand-free form 分子名称: Anti-(6-4) photoproduct antibody 64M-5 Fab (heavy chain), Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain) 著者 Yokoyama, H, Mizutani, R, Noguchi, S, Hayashida, N. 登録日 2019-07-02 公開日 2019-12-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Structural and biochemical basis of the formation of isoaspartate in the complementarity-determining region of antibody 64M-5 Fab. Sci Rep, 9, 2019
2AJY	Crystal Structure of Cocaine catalytic Antibody 7A1 Fab' in Complex with ecgonine methyl ester and benzoic acid 分子名称: 3-HYDROXY-8-METHYL-8-AZA-BICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID METHYL ESTER, Antibody 7A1 Fab', BENZOIC ACID, ... 著者 Zhu, X, Wilson, I.A. 登録日 2005-08-02 公開日 2006-02-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Complete reaction cycle of a cocaine catalytic antibody at atomic resolution. Structure, 14, 2006
2AJX	Crystal Structure of Cocaine catalytic Antibody 7A1 Fab' in Complex with Transition State Analog 分子名称: 3-(HYDROXY-PHENYL-PHOSPHINOYLOXY)-8-METHYL-8-AZA-BICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID METHYL ESTER, Antibody 7A1 Fab' 著者 Zhu, X, Wilson, I.A. 登録日 2005-08-02 公開日 2006-02-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Complete reaction cycle of a cocaine catalytic antibody at atomic resolution. Structure, 14, 2006
1IQW	CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF THE MOUSE ANTI-HUMAN FAS ANTIBODY HFE7A 分子名称: ANTIBODY M-HFE7A, HEAVY CHAIN, LIGHT CHAIN 著者 Ito, S, Takayama, T, Hanzawa, H, Ichikawa, K, Ohsumi, J, Serizawa, N, Hata, T, Haruyama, H. 登録日 2001-08-10 公開日 2002-01-23 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of the antigen-binding fragment of apoptosis-inducing mouse anti-human Fas monoclonal antibody HFE7A. J.Biochem., 131, 2002
2AJS	Crystal structure of cocaine catalytic antibody 7A1 Fab' in complex with heptaethylene glycol 分子名称: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Antibody 7A1 FAB', GLYCEROL, ... 著者 Zhu, X, Wilson, I.A. 登録日 2005-08-02 公開日 2006-02-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Complete reaction cycle of a cocaine catalytic antibody at atomic resolution. Structure, 14, 2006
2AJZ	Crystal Structure of Cocaine catalytic Antibody 7A1 Fab' in Complex with ecgonine methyl ester 分子名称: 3-HYDROXY-8-METHYL-8-AZA-BICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID METHYL ESTER, Antibody 7A1 Fab' 著者 Zhu, X, Wilson, I.A. 登録日 2005-08-02 公開日 2006-02-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Complete reaction cycle of a cocaine catalytic antibody at atomic resolution. Structure, 14, 2006
1F8T	FAB (LNKB-2) OF MONOCLONAL ANTIBODY, CRYSTAL STRUCTURE 分子名称: ANTIBODY FAB FRAGMENT (HEAVY CHAIN), ANTIBODY FAB FRAGMENT (LIGHT CHAIN) 著者 Fokin, A.V, Afonin, P.V, Mikhailova, I.I, Tsygannik, I.N, Mareeva, T.I. 登録日 2000-07-05 公開日 2001-07-05 最終更新日 2018-04-04 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Spatial structure of a Fab-fragment of a monoclonal antibody to human interleukin-2 in two crystalline forms at a resolution of 2.2 and 2.9 angstroms Bioorg.Khim., 26, 2000

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