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6AJS
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BU of 6ajs by Molmil
H109S mutant form of Uracil DNA glycosylase X.
分子名称: IRON/SULFUR CLUSTER, Uracil DNA glycosylase superfamily protein
著者Ahn, W.C, Aroli, S, Varshney, U, Woo, E.J.
登録日2018-08-28
公開日2019-05-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.632 Å)
主引用文献Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision.
Nat.Chem.Biol., 15, 2019
6AJO
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BU of 6ajo by Molmil
Complex form of Uracil DNA glycosylase X and uracil-DNA.
分子名称: DNA (5'-D(P*(ORP)P*TP*T)-3'), IRON/SULFUR CLUSTER, PHOSPHATE ION, ...
著者Ahn, W.C, Aroli, S, Varshney, U, Woo, E.J.
登録日2018-08-28
公開日2019-05-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.269 Å)
主引用文献Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision.
Nat.Chem.Biol., 15, 2019
6AJR
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BU of 6ajr by Molmil
Complex form of Uracil DNA glycosylase X and uracil
分子名称: IRON/SULFUR CLUSTER, URACIL, Uracil DNA glycosylase superfamily protein
著者Ahn, W.C, Aroli, S, Varshney, U, Woo, E.J.
登録日2018-08-28
公開日2019-05-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.341 Å)
主引用文献Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision.
Nat.Chem.Biol., 15, 2019
6IOD
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BU of 6iod by Molmil
The structure of UdgX in complex with single-stranded DNA
分子名称: DNA, IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein
著者Xie, W, Tu, J.
登録日2018-10-29
公開日2019-07-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
6IO9
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BU of 6io9 by Molmil
The structure of apo-UdgX
分子名称: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, SULFATE ION
著者Xie, W, Tu, J.
登録日2018-10-29
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
6IOB
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BU of 6iob by Molmil
The structure of the H109A mutant of UdgX in complex with uracil
分子名称: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, URACIL
著者Xie, W, Tu, J.
登録日2018-10-29
公開日2019-07-24
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
6IOA
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BU of 6ioa by Molmil
The structure of UdgX in complex with uracil
分子名称: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, SULFATE ION, ...
著者Xie, W, Tu, J.
登録日2018-10-29
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
6IOC
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BU of 6ioc by Molmil
The structure of the H109Q mutant of UdgX in complex with uracil
分子名称: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, URACIL
著者Xie, W, Tu, J.
登録日2018-10-29
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.624 Å)
主引用文献Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
6U17
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BU of 6u17 by Molmil
Human thymine DNA glycosylase bound to DNA with 2'-F-5-carboxyl-dC substrate analog
分子名称: ACETATE ION, DNA (28-MER), DNA (30-MER), ...
著者Pidugu, L.S, Pozharski, E, Drohat, A.C.
登録日2019-08-15
公開日2019-11-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Excision of 5-Carboxylcytosine by Thymine DNA Glycosylase.
J.Am.Chem.Soc., 141, 2019
6U15
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BU of 6u15 by Molmil
Human thymine DNA glycosylase N140A mutant bound to DNA with 2'-F-5-carboxyl-dC substrate analog
分子名称: DNA (28-MER), G/T mismatch-specific thymine DNA glycosylase
著者Pidugu, L.S, Pozharski, E, Drohat, A.C.
登録日2019-08-15
公開日2019-11-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Excision of 5-Carboxylcytosine by Thymine DNA Glycosylase.
J.Am.Chem.Soc., 141, 2019
6U16
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BU of 6u16 by Molmil
Human thymine DNA glycosylase N140A mutant bound to DNA with 5-carboxyl-dC substrate
分子名称: 1,2-ETHANEDIOL, DNA (28-MER), G/T mismatch-specific thymine DNA glycosylase
著者Pidugu, L.S, Pozharski, E, Drohat, A.C.
登録日2019-08-15
公開日2019-11-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Excision of 5-Carboxylcytosine by Thymine DNA Glycosylase.
J.Am.Chem.Soc., 141, 2019
6L5B
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BU of 6l5b by Molmil
The structure of the UdgX mutant H109E at a post-excision state
分子名称: IRON/SULFUR CLUSTER, Uracil DNA glycosylase superfamily protein
著者Xie, W, Tu, J, Zeng, H.
登録日2019-10-22
公開日2020-10-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.00004983 Å)
主引用文献Structural insights into an MsmUdgX mutant capable of both crosslinking and uracil excision capability.
DNA Repair (Amst), 97, 2021
6L5A
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BU of 6l5a by Molmil
The structure of the UdgX mutant H109E at a pre-excision state
分子名称: GLYCEROL, IRON/SULFUR CLUSTER, Uracil DNA glycosylase superfamily protein
著者Xie, W, Tu, J, Zeng, H.
登録日2019-10-22
公開日2020-10-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.80007327 Å)
主引用文献Structural insights into an MsmUdgX mutant capable of both crosslinking and uracil excision capability.
DNA Repair (Amst), 97, 2021
6L6S
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BU of 6l6s by Molmil
The structure of the UdgX mutant H109E crosslinked to single-stranded DNA
分子名称: DNA (5'-D(P*TP*GP*(ORP)P*AP*GP*GP*CP*AP*TP*GP*C)-3'), IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein
著者Xie, W, Tu, J, Zeng, H.
登録日2019-10-29
公開日2020-11-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.06425953 Å)
主引用文献Structural insights into an MsmUdgX mutant capable of both crosslinking and uracil excision capability.
DNA Repair (Amst), 97, 2021
6VBA
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BU of 6vba by Molmil
Structure of human Uracil DNA Glycosylase (UDG) bound to Aurintricarboxylic acid (ATA)
分子名称: 3,3'-[(3-carboxy-4-oxocyclohexa-2,5-dien-1-ylidene)methylene]bis(6-hydroxybenzoic acid), Uracil-DNA glycosylase
著者Moiani, D, Arvai, A.S, Tainer, J.A.
登録日2019-12-18
公開日2021-03-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献An effective human uracil-DNA glycosylase inhibitor targets the open pre-catalytic active site conformation.
Prog.Biophys.Mol.Biol., 163, 2021
6LYD
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BU of 6lyd by Molmil
Crystal Structure of mimivirus UNG Y322L in complex with UGI
分子名称: Probable uracil-DNA glycosylase, Uracil-DNA glycosylase inhibitor
著者Pathak, D, Kwon, E, Kim, D.Y.
登録日2020-02-14
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Selective interactions between mimivirus uracil-DNA glycosylase and inhibitory proteins determined by a single amino acid.
J.Struct.Biol., 211, 2020
6LYE
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BU of 6lye by Molmil
Crystal Structure of mimivirus UNG Y322F in complex with UGI
分子名称: Probable uracil-DNA glycosylase, Uracil-DNA glycosylase inhibitor
著者Pathak, D, Kwon, E, Kim, D.Y.
登録日2020-02-14
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Selective interactions between mimivirus uracil-DNA glycosylase and inhibitory proteins determined by a single amino acid.
J.Struct.Biol., 211, 2020
6LYJ
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BU of 6lyj by Molmil
The crystal structure of SAUGI/EBVUDG complex
分子名称: SAUGI, Uracil-DNA glycosylase
著者Liao, Y.T, Ko, T.P, Wang, H.C.
登録日2020-02-14
公開日2020-06-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insight into the differential interactions between the DNA mimic protein SAUGI and two gamma herpesvirus uracil-DNA glycosylases.
Int.J.Biol.Macromol., 160, 2020
6LYV
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BU of 6lyv by Molmil
The crystal structure of SAUGI/KSHVUDG complex
分子名称: SAUGI, Uracil-DNA glycosylase
著者Liao, Y.T, Ko, T.P, Wang, H.C.
登録日2020-02-16
公開日2020-06-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insight into the differential interactions between the DNA mimic protein SAUGI and two gamma herpesvirus uracil-DNA glycosylases.
Int.J.Biol.Macromol., 160, 2020
7V7C
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BU of 7v7c by Molmil
CryoEM structure of DDB1-VprBP-Vpr-UNG2(94-313) complex
分子名称: DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1, Protein Vpr, ...
著者Wang, D, Xu, J, Liu, Q, Xiang, Y.
登録日2021-08-21
公開日2022-08-31
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural insights into the HIV-1 Vpr mediated ubiquitination through the Cullin-RING E3 ubiquitin ligase
To Be Published
8AIN
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BU of 8ain by Molmil
MCUGI SAUNG complex
分子名称: 1,2-ETHANEDIOL, MCUGI, SULFATE ION, ...
著者Muselmani, W, Savva, R.
登録日2022-07-26
公開日2023-06-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Multimodal Approach towards Genomic Identification of Protein Inhibitors of Uracil-DNA Glycosylase.
Viruses, 15, 2023
8AIL
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BU of 8ail by Molmil
Bacillus phage VMY22 p56 in complex with Bacillus weidmannii Ung
分子名称: Bacillus phage VMY22 p56, GLYCEROL, IODIDE ION, ...
著者Muselmani, W, Bagneris, C, Savva, R.
登録日2022-07-26
公開日2023-06-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献A Multimodal Approach towards Genomic Identification of Protein Inhibitors of Uracil-DNA Glycosylase.
Viruses, 15, 2023
8AIM
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BU of 8aim by Molmil
Ugi-2 SAUNG complex
分子名称: Uracil-DNA glycosylase, Uracil-DNA glycosylase inhibitor
著者Muselmani, W, Savva, R.
登録日2022-07-26
公開日2023-06-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A Multimodal Approach towards Genomic Identification of Protein Inhibitors of Uracil-DNA Glycosylase.
Viruses, 15, 2023
8I6C
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BU of 8i6c by Molmil
Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with 6-Formyl-uracil, Form III
分子名称: 6-[bis(oxidanyl)methyl]-5~{H}-pyrimidine-2,4-dione, Uracil-DNA glycosylase
著者Raj, P, Paul, A, Gopal, B.
登録日2023-01-27
公開日2023-07-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment.
Eur.J.Med.Chem., 258, 2023
8I62
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BU of 8i62 by Molmil
Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with Barbituric acid, Form I
分子名称: 1,2-ETHANEDIOL, BARBITURIC ACID, CHLORIDE ION, ...
著者Raj, P, Paul, A, Gopal, B.
登録日2023-01-27
公開日2023-07-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment.
Eur.J.Med.Chem., 258, 2023

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