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4LCB
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BU of 4lcb by Molmil
Structure of Vps4 homolog from Acidianus hospitalis
分子名称: CHLORIDE ION, Cell division protein CdvC, Vps4
著者Han, H, Hill, C.P, Whitby, F.G, Monroe, N.
登録日2013-06-21
公開日2013-11-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献The Oligomeric State of the Active Vps4 AAA ATPase.
J.Mol.Biol., 426, 2014
5C19
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BU of 5c19 by Molmil
p97 variant 2 in the apo state
分子名称: SULFATE ION, Transitional endoplasmic reticulum ATPase
著者Haenzelmann, P, Schindelin, H.
登録日2015-06-13
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Structural Basis of ATP Hydrolysis and Intersubunit Signaling in the AAA+ ATPase p97.
Structure, 24, 2016
3U60
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BU of 3u60 by Molmil
Structure of T4 Bacteriophage Clamp Loader Bound To Open Clamp, DNA and ATP Analog
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase accessory protein 44, DNA polymerase accessory protein 62, ...
著者Kelch, B.A, Makino, D.L, O'Donnell, M, Kuriyan, J.
登録日2011-10-11
公開日2012-01-04
実験手法X-RAY DIFFRACTION (3.34 Å)
主引用文献How a DNA polymerase clamp loader opens a sliding clamp.
Science, 334, 2011
3U61
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BU of 3u61 by Molmil
Structure of T4 Bacteriophage Clamp Loader Bound To Closed Clamp, DNA and ATP Analog and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase accessory protein 44, DNA polymerase accessory protein 62, ...
著者Kelch, B.A, Makino, D.L, O'Donnell, M, Kuriyan, J.
登録日2011-10-11
公開日2012-01-04
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献How a DNA polymerase clamp loader opens a sliding clamp.
Science, 334, 2011
5DYI
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BU of 5dyi by Molmil
Structure of p97 N-D1 wild-type in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Tang, W.K, Xia, D.
登録日2015-09-24
公開日2016-02-10
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.71 Å)
主引用文献Role of the D1-D2 Linker of Human VCP/p97 in the Asymmetry and ATPase Activity of the D1-domain.
Sci Rep, 6, 2016
4L16
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BU of 4l16 by Molmil
Crystal structure of FIGL-1 AAA domain in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Fidgetin-like protein 1
著者Peng, W, Lin, Z, Li, W, Lu, J, Shen, Y, Wang, C.
登録日2013-06-02
公開日2013-09-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the unusually strong ATPase activity of the AAA domain of the Caenorhabditis elegans fidgetin-like 1 (FIGL-1) protein.
J.Biol.Chem., 288, 2013
4LGM
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BU of 4lgm by Molmil
Crystal Structure of Sulfolobus solfataricus Vps4
分子名称: CHLORIDE ION, Vps4 AAA ATPase
著者Han, H, Hill, C.P, Whitby, F.G, Monroe, N.
登録日2013-06-28
公開日2013-11-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.711 Å)
主引用文献The Oligomeric State of the Active Vps4 AAA ATPase.
J.Mol.Biol., 426, 2014
3WHK
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BU of 3whk by Molmil
Crystal structure of PAN-Rpt5C chimera
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A
著者Satoh, T, Saeki, Y, Hiromoto, T, Wang, Y.-H, Uekusa, Y, Yagi, H, Yoshihara, H, Yagi-Utsumi, M, Mizushima, T, Tanaka, K, Kato, K.
登録日2013-08-26
公開日2014-03-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for proteasome formation controlled by an assembly chaperone nas2.
Structure, 22, 2014
7SXO
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BU of 7sxo by Molmil
Yeast Lon (PIM1) with endogenous substrate
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Lon protease homolog, ...
著者Yang, J, Song, A.S, Wiseman, R.L, Lander, G.C.
登録日2021-11-24
公開日2022-01-12
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of hexameric yeast Lon protease (PIM1) highlights the importance of conserved structural elements.
J.Biol.Chem., 298, 2022
7SWL
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BU of 7swl by Molmil
CryoEM structure of the N-terminal-deleted Rix7 AAA-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Kocaman, S, Stanley, R.E, Lo, Y.H, Krahn, J, Dandey, V.P, Sobhany, M, Petrovich, M, Williams, J.G, Deterding, L.J, Borgnia, M.J, Etigunta, S.
登録日2021-11-20
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Communication network within the essential AAA-ATPase Rix7 drives ribosome assembly.
Pnas Nexus, 1, 2022
7T0V
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BU of 7t0v by Molmil
CryoEM structure of the crosslinked Rix7 AAA-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Kocaman, S, Stanley, R.E, Lo, Y.H, Krahn, J, Dandey, V.P, Sobhany, M, Petrovich, M, Williams, J.G, Deterding, L.J, Borgnia, M.J, Etigunta, S.
登録日2021-11-30
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Communication network within the essential AAA-ATPase Rix7 drives ribosome assembly.
Pnas Nexus, 1, 2022
7T3I
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BU of 7t3i by Molmil
CryoEM structure of the Rix7 D2 Walker B mutant
分子名称: ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, Rix7, ...
著者Kocaman, S, Stanley, R.E.
登録日2021-12-08
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Communication network within the essential AAA-ATPase Rix7 drives ribosome assembly.
Pnas Nexus, 1, 2022
7STB
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BU of 7stb by Molmil
Closed state of Rad24-RFC:9-1-1 bound to a 5' ss/dsDNA junction
分子名称: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, DNA (5'-D(P*CP*GP*CP*TP*CP*CP*TP*TP*CP*CP*TP*GP*AP*CP*TP*CP*GP*TP*CP*C)-3'), ...
著者Castaneda, J.C, Schrecker, M, Remus, D, Hite, R.K.
登録日2021-11-12
公開日2022-03-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.72 Å)
主引用文献Mechanisms of loading and release of the 9-1-1 checkpoint clamp.
Nat.Struct.Mol.Biol., 29, 2022
7ST9
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BU of 7st9 by Molmil
Open state of Rad24-RFC:9-1-1 bound to a 5' ss/dsDNA junction
分子名称: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, DNA (5'-D(P*CP*GP*CP*TP*CP*CP*TP*TP*CP*CP*TP*GP*AP*CP*TP*CP*GP*TP*CP*C)-3'), ...
著者Castaneda, J.C, Schrecker, M, Remus, D, Hite, R.K.
登録日2021-11-12
公開日2022-03-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Mechanisms of loading and release of the 9-1-1 checkpoint clamp.
Nat.Struct.Mol.Biol., 29, 2022
7STE
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BU of 7ste by Molmil
Rad24-RFC ADP state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Checkpoint protein RAD24, ...
著者Castaneda, J.C, Schrecker, M, Remus, D, Hite, R.K.
登録日2021-11-12
公開日2022-04-06
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Mechanisms of loading and release of the 9-1-1 checkpoint clamp.
Nat.Struct.Mol.Biol., 29, 2022
7TDO
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BU of 7tdo by Molmil
Cryo-EM structure of transmembrane AAA+ protease FtsH in the ADP state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH
著者Liu, W, Schoonen, M, Wang, T, McSweeney, S, Liu, Q.
登録日2022-01-02
公開日2022-04-06
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Cryo-EM structure of transmembrane AAA+ protease FtsH in the ADP state.
Commun Biol, 5, 2022
7SUK
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BU of 7suk by Molmil
Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells
分子名称: 18S pre-rRNA, 40S ribosomal protein S11-A, 40S ribosomal protein S13, ...
著者Rai, J, Zhao, Y, Li, H.
登録日2021-11-17
公開日2022-07-06
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (3.99 Å)
主引用文献Artificial intelligence-assisted cryoEM structure of Bfr2-Lcp5 complex observed in the yeast small subunit processome.
Commun Biol, 5, 2022
5IFS
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BU of 5ifs by Molmil
Quantitative interaction mapping reveals an extended ubiquitin regulatory domain in ASPL that disrupts functional p97 hexamers and induces cell death
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
著者Roske, Y, Arumughan, A, Heinemann, U, Wanker, E.
登録日2016-02-26
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Quantitative interaction mapping reveals an extended UBX domain in ASPL that disrupts functional p97 hexamers.
Nat Commun, 7, 2016
6QS8
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BU of 6qs8 by Molmil
ClpB (DWB and K476C mutant) bound to casein in presence of ATPgammaS - state KC-2B
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, MAGNESIUM ION, ...
著者Deville, C, Saibil, H.R.
登録日2019-02-20
公開日2019-07-03
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Two-Step Activation Mechanism of the ClpB Disaggregase for Sequential Substrate Threading by the Main ATPase Motor.
Cell Rep, 27, 2019
5JPQ
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BU of 5jpq by Molmil
Cryo-EM structure of the 90S pre-ribosome
分子名称: 18S ribosomal RNA, Bms1, Emg1, ...
著者Turk, M, Cheng, J, Berninghausen, O, Kornprobst, M, Flemming, D, Kos-Braun, I.C, Kos, M, Thoms, M, Hurt, E, Beckmann, R.
登録日2016-05-04
公開日2016-07-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.3 Å)
主引用文献Architecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic Ribosome.
Cell, 166, 2016
5GJR
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BU of 5gjr by Molmil
An atomic structure of the human 26S proteasome
分子名称: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
著者Huang, X.L, Luan, B, Wu, J.P, Shi, Y.G.
登録日2016-07-01
公開日2016-09-07
最終更新日2019-10-09
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献An atomic structure of the human 26S proteasome.
Nat. Struct. Mol. Biol., 23, 2016
6RQC
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BU of 6rqc by Molmil
Cryo-EM structure of an MCM loading intermediate
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (88-MER), ...
著者Miller, T.C.R, Locke, J, Costa, A.
登録日2019-05-15
公開日2019-11-20
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Mechanism of head-to-head MCM double-hexamer formation revealed by cryo-EM.
Nature, 575, 2019
5G4F
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BU of 5g4f by Molmil
Structure of the ADP-bound VAT complex
分子名称: VCP-LIKE ATPASE
著者Huang, R, Ripstein, Z.A, Augustyniak, R, Lazniewski, M, Ginalski, K, Kay, L.E, Rubinstein, J.L.
登録日2016-05-12
公開日2016-07-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Unfolding the Mechanism of the Aaa+ Unfoldase Vat by a Combined Cryo-Em, Solution NMR Study.
Proc.Natl.Acad.Sci.USA, 113, 2016
5G4G
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BU of 5g4g by Molmil
Structure of the ATPgS-bound VAT complex
分子名称: VCP-LIKE ATPASE
著者Huang, R, Ripstein, Z.A, Augustyniak, R, Lazniewski, M, Ginalski, K, Kay, L.E, Rubinstein, J.L.
登録日2016-05-12
公開日2016-07-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献Unfolding the Mechanism of the Aaa+ Unfoldase Vat by a Combined Cryo-Em, Solution NMR Study.
Proc.Natl.Acad.Sci.USA, 113, 2016
6SH3
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BU of 6sh3 by Molmil
Structure of the ADP state of the heptameric Bcs1 AAA-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, Mitochondrial chaperone BCS1
著者Kater, L, Beckmann, R.
登録日2019-08-05
公開日2020-02-05
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of the Bcs1 AAA-ATPase suggests an airlock-like translocation mechanism for folded proteins.
Nat.Struct.Mol.Biol., 27, 2020

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