PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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2WKG	Nostoc punctiforme Debranching Enzyme (NPDE)(Native form) 分子名称: ALPHA AMYLASE, CATALYTIC REGION 著者 Dumbrepatil, A.B, Choi, J.H, Song, H.N, Park, K.H, Woo, E.J. 登録日 2009-06-11 公開日 2009-09-29 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural Features of the Nostoc Punctiforme Debranching Enzyme Reveal the Basis of its Mechanism and Substrate Specificity. Proteins, 78, 2010
4UT5	Crystal structure of the LecB lectin from Pseudomonas aeruginosa strain PA7 in complex with lewis a tetrasaccharide 分子名称: CALCIUM ION, LECB LECTIN, beta-D-galactopyranose, ... 著者 Boukerb, A.M, Decor, A, Tabaroni, R, Varrot, A, Debentzmann, S, Vidal, S, Imberty, A, Cournoyer, B. 登録日 2014-07-18 公開日 2015-07-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Genomic Rearrangements and Functional Diversification of Leca and Lecb Lectin-Coding Regions Impacting the Efficacy of Glycomimetics Directed Against Pseudomonas Aeruginosa. Front.Microbiol., 7, 2016
4UTS	Room temperature crystal structure of the fast switching M159T mutant of fluorescent protein Dronpa 分子名称: FLUORESCENT PROTEIN DRONPA 著者 Kaucikas, M, Fitzpatrick, A, Bryan, E, Struve, A, Henning, R, Kosheleva, I, Srajer, V, van Thor, J.J. 登録日 2014-07-22 公開日 2015-06-03 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Room Temperature Crystal Structure of the Fast Switching M159T Mutant of the Fluorescent Protein Dronpa. Proteins, 83, 2015
4UWT	Hypocrea jecorina Cel7A E212Q mutant in complex with p-nitrophenyl cellobioside 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CELLOBIOHYDROLASE CEL7A, COBALT (II) ION, ... 著者 Nutt, A, Momeni, M.H, Johansson, G, Stahlberg, J. 登録日 2014-08-14 公開日 2015-08-26 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Enzyme kinetics by GH7 cellobiohydrolases on chromogenic substrates is dictated by non-productive binding: insights from crystal structures and MD simulation. Febs J., 2022
4V0N	Crystal structure of BBS1N in complex with ARL6DN, soaked with mercury 分子名称: ARF-LIKE SMALL GTPASE, BARDET-BIEDL SYNDROME 1 PROTEIN, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Mourao, A, Lorentzen, E. 登録日 2014-09-17 公開日 2014-11-19 最終更新日 2019-04-03 実験手法 X-RAY DIFFRACTION (3.131 Å) 主引用文献 Structural Basis for Membrane Targeting of the Bbsome by Arl6 Nat.Struct.Mol.Biol., 21, 2014
8G7M	ATP-bound mtHsp60 V72I focus 分子名称: 60 kDa heat shock protein, mitochondrial, ADENOSINE-5'-TRIPHOSPHATE, ... 著者 Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R. 登録日 2023-02-16 公開日 2023-07-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly. Biorxiv, 2023
7NTF	Cryo-EM structure of unliganded O-GlcNAc transferase 分子名称: Isoform 1 of UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit 著者 Meek, R.W, Blaza, J.N, Davies, G.J. 登録日 2021-03-09 公開日 2021-11-17 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (5.32 Å) 主引用文献 Cryo-EM structure provides insights into the dimer arrangement of the O-linked beta-N-acetylglucosamine transferase OGT. Nat Commun, 12, 2021
8G7L	ATP-bound mtHsp60 V72I 分子名称: 60 kDa heat shock protein, mitochondrial, ADENOSINE-5'-TRIPHOSPHATE, ... 著者 Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R. 登録日 2023-02-16 公開日 2023-07-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly. Biorxiv, 2023
8G7O	ATP- and mtHsp10-bound mtHsp60 V72I focus 分子名称: 10 kDa heat shock protein, mitochondrial, 60 kDa heat shock protein, ... 著者 Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R. 登録日 2023-02-16 公開日 2023-07-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly. Biorxiv, 2023
4V6X	Structure of the human 80S ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Anger, A.M, Armache, J.-P, Berninghausen, O, Habeck, M, Subklewe, M, Wilson, D.N, Beckmann, R. 登録日 2013-02-27 公開日 2014-07-09 最終更新日 2023-02-01 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 Structures of the human and Drosophila 80S ribosome. Nature, 497, 2013
1X24	Prl-1 (ptp4a) 分子名称: protein tyrosine phosphatase 4a1 著者 Zhang, Z.Y, Sun, J.P, Liu, S, Wang, W.Q, Yang, H. 登録日 2005-04-20 公開日 2005-10-11 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structure and Biochemical Properties of PRL-1, a Phosphatase Implicated in Cell Growth, Differentiation, and Tumor Invasion(,) Biochemistry, 44, 2005
8G7N	ATP- and mtHsp10-bound mtHsp60 V72I 分子名称: 10 kDa heat shock protein, mitochondrial, 60 kDa heat shock protein, ... 著者 Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R. 登録日 2023-02-16 公開日 2023-07-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly. Biorxiv, 2023
8G7J	mtHsp60 V72I apo 分子名称: 60 kDa heat shock protein, mitochondrial 著者 Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R. 登録日 2023-02-16 公開日 2023-07-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly. Biorxiv, 2023
8G7K	mtHsp60 V72I apo focus 分子名称: 60 kDa heat shock protein, mitochondrial 著者 Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R. 登録日 2023-02-16 公開日 2023-07-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly. Biorxiv, 2023
8JFK	PhK holoenzyme in inactive state, muscle isoform 分子名称: Calmodulin-1, FARNESYL, Phosphorylase b kinase gamma catalytic chain, ... 著者 Yang, X.K, Xiao, J.Y. 登録日 2023-05-18 公開日 2024-04-03 最終更新日 2024-04-10 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Architecture and activation of human muscle phosphorylase kinase. Nat Commun, 15, 2024
7NWT	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Hill, C.H, Napthine, S, Pekarek, L, Kibe, A, Firth, A.E, Graham, S.C, Caliskan, N, Brierley, I. 登録日 2021-03-17 公開日 2021-12-15 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.66 Å) 主引用文献 Structural and molecular basis for Cardiovirus 2A protein as a viral gene expression switch Nat Commun, 12, 2021
8ATJ	Crystal Structure of Shank2-SAM domain 分子名称: CHLORIDE ION, FORMIC ACID, Isoform 4 of SH3 and multiple ankyrin repeat domains protein 2, ... 著者 Bento, I, Gracia Alai, M, Kreienkamp, J.-H. 登録日 2022-08-23 公開日 2022-11-30 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.117 Å) 主引用文献 Structural deficits in key domains of Shank2 lead to alterations in postsynaptic nanoclusters and to a neurodevelopmental disorder in humans. Mol Psychiatry, 2022
8B10	Crystal Structure of Shank2-SAM mutant domain - L1800W 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Bento, I, Gracia Alai, M, Kreienkamp, J.-H. 登録日 2022-09-08 公開日 2022-11-30 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural deficits in key domains of Shank2 lead to alterations in postsynaptic nanoclusters and to a neurodevelopmental disorder in humans. Mol Psychiatry, 2022
2M02	3D structure of cap-gly domain of mammalian dynactin determined by magic angle spinning NMR spectroscopy 分子名称: Dynactin subunit 1 著者 Yan, S, Hou, G, Schwieters, C.D, Ahmed, S, Williams, J.C, Polenova, T. 登録日 2012-10-15 公開日 2013-05-08 最終更新日 2024-05-15 実験手法 SOLID-STATE NMR 主引用文献 Three-Dimensional Structure of CAP-Gly Domain of Mammalian Dynactin Determined by Magic Angle Spinning NMR Spectroscopy: Conformational Plasticity and Interactions with End-Binding Protein EB1. J.Mol.Biol., 425, 2013
2WC7	Crystal structure of Nostoc Punctiforme Debranching Enzyme(NPDE)(Acarbose soaked) 分子名称: ALPHA AMYLASE, CATALYTIC REGION 著者 Dumbrepatil, A.-B, Song, H.-N, Choi, J.-H, Park, K.-H, Woo, E.-J. 登録日 2009-03-10 公開日 2009-09-29 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.37 Å) 主引用文献 Structural Features of the Nostoc Punctiforme Debranching Enzyme Reveal the Basis of its Mechanism and Substrate Specificity. Proteins, 78, 2010
2M5J	Solution structure of the periplasmic signaling domain of HasR, a TonB-dependent outer membrane heme transporter 分子名称: HasR protein 著者 Malki, I, Cardoso de Amorim, G, Prochnicka-Chalufour, A, Simenel, C, Delepierre, M, Izadi-Pruneyre, N. 登録日 2013-02-26 公開日 2014-03-05 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Interaction of a Partially Disordered Antisigma Factor with Its Partner, the Signaling Domain of the TonB-Dependent Transporter HasR Plos One, 9, 2014
6PNP	Crystal structure of the splice insert-free neurexin-1 LNS2 domain in complex with neurexophilin-1 分子名称: Neurexin-1, Neurexophilin-1 著者 Wilson, S.C, White, K.I, Zhou, Q, Brunger, A.T. 登録日 2019-07-02 公開日 2019-10-09 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Structures of neurexophilin-neurexin complexes reveal a regulatory mechanism of alternative splicing. Embo J., 38, 2019
8J9F	Structure of STG-hydrolyzing beta-glucosidase 1 (PSTG1) 分子名称: Beta-glucosidase, GLYCEROL 著者 Yanai, T, Imaizumi, R, Takahashi, Y, Katsumura, E, Yamamoto, M, Nakayama, T, Yamashita, S, Takeshita, K, Sakai, N, Matsuura, H. 登録日 2023-05-03 公開日 2024-04-10 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Structural insights into a bacterial beta-glucosidase capable of degrading sesaminol triglucoside to produce sesaminol: toward the understanding of the aglycone recognition mechanism by the C-terminal lid domain. J.Biochem., 174, 2023
2WCS	Crystal Structure of Debranching enzyme from Nostoc punctiforme (NPDE) 分子名称: ALPHA AMYLASE, CATALYTIC REGION 著者 Dumbrepatil, A.B, Choi, J.H, Nam, S.H, Park, K.H, Woo, E.J. 登録日 2009-03-16 公開日 2009-09-29 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural Features of the Nostoc Punctiforme Debranching Enzyme Reveal the Basis of its Mechanism and Substrate Specificity. Proteins, 78, 2010
2W94	Native structure of the Discoidin I from Dictyostelium discoideum at 1.8 angstrom resolution 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ... 著者 Saboia Aragao, K, Imberty, A, Varrot, A. 登録日 2009-01-21 公開日 2010-03-31 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Discoidin I from Dictyostelium Discoideum and Interactions with Oligosaccharides: Specificity, Affinity, Crystal Structures and Comparison with Discoidin II. J.Mol.Biol., 400, 2010

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