PDB: 2041 件ウェブページステータス検索Chemie searchBIRD

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4V5O	CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. 分子名称: 18S RRNA, 40S RIBOSOMAL PROTEIN S12, 40S RIBOSOMAL PROTEIN S3A, ... 著者 Rabl, J, Leibundgut, M, Ataide, S.F, Haag, A, Ban, N. 登録日 2010-11-26 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.93 Å) 主引用文献 Crystal Structure of the Eukaryotic 40S Ribosomal Subunit in Complex with Initiation Factor 1. Science, 331, 2011
4V92	Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES 分子名称: 18S RRNA, ES1, ES10, ... 著者 Fernandez, I.S, Bai, X, Scheres, S.H.W, Ramakrishnan, V. 登録日 2014-03-21 公開日 2014-07-09 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Initiation of Translation by Cricket Paralysis Virus Ires Requires its Translocation in the Ribosome. Cell(Cambridge,Mass.), 157, 2014
3M9S	Crystal structure of respiratory complex I from Thermus thermophilus 分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ... 著者 Efremov, R.G, Baradaran, R, Sazanov, L.A. 登録日 2010-03-22 公開日 2010-05-26 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 The architecture of respiratory complex I Nature, 465, 2010
6AZ1	Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin 分子名称: E-site tRNA, LACK1, MAGNESIUM ION, ... 著者 Shalev-Benami, M, Zhang, Y, Rozenberg, H, Matzov, D, Zimmerman, E, Bashan, A, Jaffe, C.L, Yonath, A, Skiniotis, G. 登録日 2017-09-09 公開日 2017-12-06 最終更新日 2019-07-03 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Atomic resolution snapshot of Leishmania ribosome inhibition by the aminoglycoside paromomycin. Nat Commun, 8, 2017
3MHT	TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH UNMODIFIED DNA AND ADOHCY 分子名称: DNA (5'-D(*GP*AP*TP*AP*GP*CP*GP*CP*TP*AP*TP*C)-3'), DNA (5'-D(*TP*GP*AP*TP*AP*GP*CP*GP*CP*TP*AP*TP*C)-3'), PROTEIN (HHAI METHYLTRANSFERASE (E.C.2.1.1.73)), ... 著者 O'Gara, M, Klimasauskas, S, Roberts, R.J, Cheng, X. 登録日 1996-07-24 公開日 1997-01-27 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Enzymatic C5-cytosine methylation of DNA: mechanistic implications of new crystal structures for HhaL methyltransferase-DNA-AdoHcy complexes. J.Mol.Biol., 261, 1996
3NDP	Crystal structure of human AK4(L171P) 分子名称: Adenylate kinase isoenzyme 4, SULFATE ION 著者 Liu, R, Wang, Y, Wei, Z, Gong, W. 登録日 2010-06-07 公開日 2010-06-23 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of human adenylate kinase 4 (L171P) suggests the role of hinge region in protein domain motion Biochem.Biophys.Res.Commun., 379, 2009
5WLC	The complete structure of the small subunit processome 分子名称: 18S pre-rRNA, 5' ETS, Bms1, ... 著者 Barandun, J, Chaker-Margot, M, Hunziker, M, Klinge, S. 登録日 2017-07-26 公開日 2017-09-27 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 The complete structure of the small-subunit processome. Nat. Struct. Mol. Biol., 24, 2017
5WYJ	Cryo-EM structure of the 90S small subunit pre-ribosome (Dhr1-depleted, Enp1-TAP, state 1) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S ribosomal RNA, 40S ribosomal protein S1-A, ... 著者 Ye, K, Zhu, X, Sun, Q. 登録日 2017-01-13 公開日 2017-03-29 最終更新日 2019-10-09 実験手法 ELECTRON MICROSCOPY (8.7 Å) 主引用文献 Molecular architecture of the 90S small subunit pre-ribosome. Elife, 6, 2017
1JS4	ENDO/EXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA 分子名称: CALCIUM ION, ENDO/EXOCELLULASE E4, beta-D-glucopyranose, ... 著者 Sakon, J, Wilson, D.B, Karplus, P.A. 登録日 1997-05-30 公開日 1997-09-17 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure and mechanism of endo/exocellulase E4 from Thermomonospora fusca. Nat.Struct.Biol., 4, 1997
1JG2	Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with adenosine 分子名称: ADENOSINE, SODIUM ION, protein-L-isoaspartate O-methyltransferase 著者 Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O. 登録日 2001-06-22 公開日 2001-11-16 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate. J.Mol.Biol., 313, 2001
5XJ5	Crystal structure of PlsY (YgiH), an integral membrane glycerol 3-phosphate acyltransferase - the monoacylglycerol form 分子名称: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, GLYCINE, Glycerol-3-phosphate acyltransferase, ... 著者 Li, Z, Li, D. 登録日 2017-04-30 公開日 2017-12-06 実験手法 X-RAY DIFFRACTION (1.481 Å) 主引用文献 Structural insights into the committed step of bacterial phospholipid biosynthesis. Nat Commun, 8, 2017
5X6I	Crystal structure of B. subtilis adenylate kinase variant 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ... 著者 Moon, S, Bae, E. 登録日 2017-02-22 公開日 2018-02-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and mutational analyses of psychrophilic and mesophilic adenylate kinases highlight the role of hydrophobic interactions in protein thermal stability. Struct Dyn., 6, 2019
5X6J	Crystal structure of B. globisporus adenylate kinase variant 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION 著者 Moon, S, Bae, E. 登録日 2017-02-22 公開日 2018-02-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural and mutational analyses of psychrophilic and mesophilic adenylate kinases highlight the role of hydrophobic interactions in protein thermal stability. Struct Dyn., 6, 2019
1M0E	ZEBULARINE: A NOVEL DNA METHYLATION INHIBITOR THAT FORMS A COVALENT COMPLEX WITH DNA METHYLTRANSFERASE 分子名称: 5'-D(P*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3', 5'-D(P*GP*TP*CP*AP*GP*(Z)P*GP*CP*AP*TP*GP*G)-3', Modification methylase HhaI, ... 著者 Zhou, L, Cheng, X, Connolly, B.A, Dickman, M.J, Hurd, P.J, Hornby, D.P. 登録日 2002-06-12 公開日 2002-09-18 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 ZEBULARINE: A NOVEL DNA METHYLATION INHIBITOR THAT FORMS A COVALENT COMPLEX WITH DNA METHYLTRANSFERASES J.MOL.BIOL., 321, 2002
5XXU	Small subunit of Toxoplasma gondii ribosome 分子名称: 18S RNA, Ribosomal protein eL41, Ribosomal protein eS1, ... 著者 LI, Z, Guo, Q, Zheng, L, Ji, Y, Xie, Y, Lai, D, Lun, Z, Suo, X, Gao, N. 登録日 2017-07-05 公開日 2017-08-30 最終更新日 2018-10-24 実験手法 ELECTRON MICROSCOPY (3.35 Å) 主引用文献 Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii Cell Res., 27, 2017
1KS8	The structure of Endoglucanase from termite, Nasutitermes takasagoensis, at pH 2.5. 分子名称: Endo-b-1,4-glucanase, SULFATE ION 著者 Khademi, S, Guarino, L.A, Watanabe, H, Tokuda, G, Meyer, E.F. 登録日 2002-01-11 公開日 2003-01-21 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structure of an endoglucanase from termite, Nasutitermes takasagoensis. Acta Crystallogr.,Sect.D, 58, 2002
1KSD	The structure of Endoglucanase from termite, Nasutitermes takasagoensis, at pH 6.5. 分子名称: CALCIUM ION, Endo-b-1,4-glucanase 著者 Khademi, S, Guarino, L.A, Watanabe, H, Tokuda, G, Meyer, E.F. 登録日 2002-01-12 公開日 2003-01-21 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure of an endoglucanase from termite, Nasutitermes takasagoensis. Acta Crystallogr.,Sect.D, 58, 2002
1JG1	Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with S-ADENOSYL-L-HOMOCYSTEINE 分子名称: S-ADENOSYL-L-HOMOCYSTEINE, protein-L-isoaspartate O-methyltransferase 著者 Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O. 登録日 2001-06-22 公開日 2001-11-16 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate. J.Mol.Biol., 313, 2001
1JG4	Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with S-adenosylmethionine 分子名称: S-ADENOSYLMETHIONINE, protein-L-isoaspartate O-methyltransferase 著者 Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O. 登録日 2001-06-22 公開日 2001-11-16 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate. J.Mol.Biol., 313, 2001
1JG3	Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with adenosine & VYP(ISP)HA substrate 分子名称: ADENOSINE, CHLORIDE ION, SODIUM ION, ... 著者 Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O. 登録日 2001-06-22 公開日 2001-11-16 最終更新日 2011-07-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate. J.Mol.Biol., 313, 2001
1KSC	The structure of Endoglucanase from termite, Nasutitermes takasagoensis, at pH 5.6. 分子名称: CALCIUM ION, Endo-b-1,4-glucanase 著者 Khademi, S, Guarino, L.A, Watanabe, H, Tokuda, G, Meyer, E.F. 登録日 2002-01-11 公開日 2003-01-21 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structure of an endoglucanase from termite, Nasutitermes takasagoensis. Acta Crystallogr.,Sect.D, 58, 2002
1MHT	COVALENT TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE, DNA AND S-ADENOSYL-L-HOMOCYSTEINE 分子名称: DNA (5'-D(*TP*GP*AP*TP*AP*GP*(C36)P*GP*CP*TP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*AP*GP*(C36)P*GP*CP*TP*AP*TP*C)-3'), PROTEIN (HHAI METHYLTRANSFERASE), ... 著者 Cheng, X. 登録日 1994-12-08 公開日 1995-06-03 最終更新日 2018-04-18 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 HhaI methyltransferase flips its target base out of the DNA helix. Cell(Cambridge,Mass.), 76, 1994
1E4V	Mutant G10V of adenylate kinase from E. coli, modified in the Gly-loop 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE 著者 Mueller, C.W, Schulz, G.E. 登録日 2000-07-12 公開日 2000-08-04 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structures of two mutants of adenylate kinase from Escherichia coli that modify the Gly-loop. Proteins, 15, 1993
2RH5	Structure of Apo Adenylate Kinase from Aquifex Aeolicus 分子名称: Adenylate kinase 著者 Thai, V, Wolf-Watz, M, Fenn, T, Pozharski, E, Wilson, M.A, Petsko, G.A, Kern, D. 登録日 2007-10-05 公開日 2007-12-18 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Intrinsic motions along an enzymatic reaction trajectory. Nature, 450, 2007
7MPI	Stm1 bound vacant 80S structure isolated from cbf5-D95A 分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... 著者 Rai, J, Zhao, Y, Li, H. 登録日 2021-05-04 公開日 2022-05-11 最終更新日 2022-07-20 実験手法 ELECTRON MICROSCOPY (3.05 Å) 主引用文献 CryoEM structures of pseudouridine-free ribosome suggest impacts of chemical modifications on ribosome conformations. Structure, 30, 2022

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